Bioprospecting Trichoderma: A Systematic Roadmap to Screen Genomes and Natural Products for Biocontrol Applications DOI Creative Commons
Tomás A. Rush, Him K. Shrestha, Muralikrishnan Gopalakrishnan Meena

и другие.

Frontiers in Fungal Biology, Год журнала: 2021, Номер 2

Опубликована: Сен. 16, 2021

Natural products derived from microbes are crucial innovations that would help in reaching sustainability development goals worldwide while achieving bioeconomic growth. Trichoderma species well-studied model fungal organisms used for their biocontrol properties with great potential to alleviate the use of agrochemicals agriculture. However, identifying and characterizing effective natural novel or strains as biological control remains a meticulous process many known challenges be navigated. Integration recent advancements various “omics” technologies, next generation biodesign, machine learning, artificial intelligence approaches could greatly advance bioprospecting goals. Herein, we propose roadmap assessing impact already newly discovered applications. By screening publicly available genome sequences, first highlight prevalence putative biosynthetic gene clusters antimicrobial peptides among genomes an initial step toward predicting which increase diversity products. Next, discuss high-throughput methods discover characterize how these findings both fundamental applied research fields.

Язык: Английский

The distinct plastisphere microbiome in the terrestrial-marine ecotone is a reservoir for putative degraders of petroleum-based polymers DOI
Guan Pang, Xuesong Li, Mingyue Ding

и другие.

Journal of Hazardous Materials, Год журнала: 2023, Номер 453, С. 131399 - 131399

Опубликована: Апрель 12, 2023

Язык: Английский

Процитировано

22

Solid-State Fermentation of Trichoderma spp.: A New Way to Valorize the Agricultural Digestate and Produce Value-Added Bioproducts DOI Creative Commons
Daniela Bulgari, Carlotta Alias, Gregorio Peron

и другие.

Journal of Agricultural and Food Chemistry, Год журнала: 2023, Номер 71(9), С. 3994 - 4004

Опубликована: Фев. 3, 2023

In this study, the agricultural digestate from anaerobic biogas production mixed with food wastes was used as a substrate to grow Trichoderma reesei RUT-C30 and atroviride Ta13 in solid-state fermentation (SSF) produce high-value bioproducts, such bioactive molecules be ingredients for biostimulants. The spp. reached their maximum growth after 6 3 SSF days, respectively. Both species were able cellulase, esterase, citric malic acids, while T. also produced gibberellins oxylipins shown by ultraperformance liquid chromatography quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) profiling. Experimental evaluation of germination parameters highlighted significant promotion tomato seed root elongation induced crude extracts SSF. This study suggests an innovative sustainable use whole agro-food waste valuable fungal biorefineries. Here, it has been applied plant growth-promoting fungi agriculture.

Язык: Английский

Процитировано

17

Trichoderma and Mycosynthesis of Metal Nanoparticles: Role of Their Secondary Metabolites DOI Creative Commons
G. Herrera‐Pérez, Laura E. Castellano, Claudia A. Ramírez-Valdespino

и другие.

Journal of Fungi, Год журнала: 2024, Номер 10(7), С. 443 - 443

Опубликована: Июнь 22, 2024

Nanocompounds are widely used in many fields such as environmental, medicine, or agriculture. Nowadays, these nanocompounds mainly synthesized by chemical methods, causing environmental pollution and potential health problems. Thus, microorganisms have been investigated nanoparticle green biosynthesizers. The main research is focused on the synthesis of nanoparticles (NPs) using algae, yeast, bacteria, fungi. Among them, fungi most used, due to their simple effective mycosynthesis. Fungi well other organisms involved NPs use secondary metabolites (SMs) mediate catalyze reactions produce metal (MNPs) being able act capping agents producing different physicochemical characteristics biological activities MNPs. various for mycosynthesis

Язык: Английский

Процитировано

8

Co-inoculation of Trichoderma gamsii A5MH and Trichoderma harzianum Tr906 in wheat suppresses in planta abundance of the crown rot pathogen Fusarium pseudograminearum and impacts the rhizosphere soil fungal microbiome DOI Creative Commons
Belinda E. Stummer, Xinjian Zhang,

Hetong Yang

и другие.

Biological Control, Год журнала: 2021, Номер 165, С. 104809 - 104809

Опубликована: Ноя. 20, 2021

Wheat root endophytic strains Trichoderma gamsii A5MH and T. harzianum Tr906 were assessed for their abilities to suppress in planta abundance of the crown rot pathogen Fusarium pseudograminearum increase growth durum wheat. suppressive assays conducted natural Kandosol Chromosol wheat cropping soils with greater disease expression observed Chromosol. Rhizosphere A5MH, F. quantified by species-specific qPCR at plant maturity. Strains actively colonized rhizosphere suppressed both soil types, inoculants persisting roots 84 days postemergence. Strain increased biomass soils, whereas strain only Chromosol-grown Metabolites decreased vitro pathogenic pseudograminearum, Rhizoctonia solani Pythium irregulare, but did not inhibit either inoculant. Compared individually inoculated strains, co-inoculation affect niche abundance, efficacies or growth-benefits inoculant symptoms however, co-inoculated treatments. Each treatment had distinct impacts on structure (beta diversity) indigenous fungal community treatments greatest overall effects (alpha) diversity structure. Community differentiation was primarily attributed spp. associated decreases predominantly saprophytic genera.

Язык: Английский

Процитировано

41

Bioprospecting Trichoderma: A Systematic Roadmap to Screen Genomes and Natural Products for Biocontrol Applications DOI Creative Commons
Tomás A. Rush, Him K. Shrestha, Muralikrishnan Gopalakrishnan Meena

и другие.

Frontiers in Fungal Biology, Год журнала: 2021, Номер 2

Опубликована: Сен. 16, 2021

Natural products derived from microbes are crucial innovations that would help in reaching sustainability development goals worldwide while achieving bioeconomic growth. Trichoderma species well-studied model fungal organisms used for their biocontrol properties with great potential to alleviate the use of agrochemicals agriculture. However, identifying and characterizing effective natural novel or strains as biological control remains a meticulous process many known challenges be navigated. Integration recent advancements various “omics” technologies, next generation biodesign, machine learning, artificial intelligence approaches could greatly advance bioprospecting goals. Herein, we propose roadmap assessing impact already newly discovered applications. By screening publicly available genome sequences, first highlight prevalence putative biosynthetic gene clusters antimicrobial peptides among genomes an initial step toward predicting which increase diversity products. Next, discuss high-throughput methods discover characterize how these findings both fundamental applied research fields.

Язык: Английский

Процитировано

40