Journal of Experimental Botany,
Год журнала:
2024,
Номер
75(18), С. 5547 - 5556
Опубликована: Июнь 18, 2024
Abstract
Nitrogen
(N)
is
a
vital
nutrient
and
an
essential
component
of
biological
macromolecules
such
as
nucleic
acids
proteins.
Microorganisms
are
major
drivers
N-cycling
processes
in
all
ecosystems,
including
the
soil
plant
environment.
The
availability
N
growth-limiting
factor
for
plants
it
significantly
affected
by
microbiome.
Plants
microorganisms
form
complex
interaction
networks
resulting
molecular
signaling,
exchange,
other
distinct
metabolic
responses.
In
these
networks,
microbial
partners
influence
growth
use
efficiency
either
positively
or
negatively.
Harnessing
beneficial
effects
specific
players
within
crop
microbiomes
promising
strategy
to
counteract
emerging
threats
human
planetary
health
due
overuse
industrial
fertilizers.
However,
addition
N-providing
activities
(e.g.
well-known
symbiosis
legumes
Rhizobium
spp.),
plant–microorganism
interactions
must
be
considered
obtain
complete
picture
how
microbial-driven
transformations
might
affect
nutrition.
For
this,
we
review
recent
insights
into
tight
interplay
between
microorganisms,
focusing
on
N-transformation
representing
sources
sinks
that
ultimately
shape
acquisition.
Sustainability,
Год журнала:
2024,
Номер
16(11), С. 4512 - 4512
Опубликована: Май 26, 2024
Nitrogen
(N)
is
a
limiting
ecological
factor
for
plant
growth
in
most
agroecosystems.
Biological
N
fixation,
especially
from
nodulated
legumes,
has
been
promoted
recent
decades
as
an
alternative
or
complement
to
industrially
synthesized
fertilizers.
The
possibility
of
utilizing
N-fixing
organisms
the
phyllosphere
that
demonstrate
effectiveness
across
wide
range
crops
particularly
exciting.
In
this
study,
we
examined
capacity
and
impact
on
lettuce
inoculant
recently
introduced
market,
which
contains
microorganism
Methylobacterium
symbioticum
recommended
various
cultivated
species.
A
pot
experiment
was
conducted
using
factorial
design,
included
(No
Yes)
four
rates
(0
(N0),
25
(N25),
50
(N50),
100
(N100)
kg
ha−1
N),
with
replicates,
over
growing
cycles.
had
significant
effect
dry
matter
yield
(DMY)
only
during
second
mean
values
cycles
ranged
9.9
13.7
g
pot−1
12.6
kg−1
pots
received
did
not
receive
inoculant,
respectively.
On
other
hand,
plants
exhibited
robust
response
applied
soil,
showing
increases
both
DMY
tissue
concentration
all
Mean
treatments
N0
N100
5.6
8.9
12.5
16.1
pot−1,
tissues
varied
inversely
DMY,
indicating
concentration/dilution
effect.
difference
between
treated
untreated
plants,
used
estimate
fixed
N,
very
low
each
soils’
rates,
assuming
average
−1.5,
−0.9,
2.4,
6.3
N0,
N25,
N50,
N100,
This
study
emphasized
amount
supplied
by
its
limited
DMY.
Generally,
biological
systems
microorganisms,
achieving
high
fixation
requires
level
specificity
host
plant,
condition
seems
have
met
lettuce.
Considering
importance
subject,
imperative
further
studies
be
determine
more
precisely
under
what
conditions
proves
valuable
input
farmers
effective
method
reducing
mineral
fertilization.
Abstract
Epiphytic
bacteria
constitute
a
vital
component
of
aquatic
ecosystems,
pivotal
in
regulating
elemental
cycling.
Despite
their
significance,
the
diversity
and
functions
epiphytic
bacterial
communities
adhering
to
various
submerged
macrophytes
remain
largely
unexplored.
In
this
study,
we
employed
metagenomic
approach
investigate
function
associated
with
six
macrophytes:
Ceratophyllum
demersum
,
Hydrilla
verticillata
Myriophyllum
verticillatum
Potamogeton
lucens
Stuckenia
pectinata
Najas
marina
.
The
results
revealed
that
predominant
species
for
each
plant
type
included
Pseudomonas
spp.,
Microbacterium
Stenotrophomonas
rhizophila
Multiple
comparisons
linear
discriminant
analysis
effect
size
indicated
significant
divergence
community
composition
among
macrophytes,
0.3–1%
uniquely
identified.
richness
S.
significantly
differed
from
both
C.
H.
although
no
differences
were
observed
evenness.
Functionally,
notable
variations
relative
abundances
genes
carbon,
nitrogen,
phosphorus
cycling
within
on
macrophyte
hosts.
Among
these
communities,
exhibited
enrichment
related
3-hydroxypropionate
bicycle
nitrogen
assimilation,
translocation,
denitrification.
Conversely,
M.
showcased
linked
reductive
citric
acid
cycle
(Arnon-Buchanan
cycle),
pentose
phosphate
(Calvin
polyphosphate
degradation,
organic
metabolism.
summary,
our
findings
offer
valuable
insights
into
leaves,
shedding
light
roles
lake
ecosystems.
Plants,
Год журнала:
2024,
Номер
13(5), С. 672 - 672
Опубликована: Фев. 28, 2024
Botrytis
cinerea,
the
causative
agent
of
gray
mold
disease
(GMD),
invades
plants
to
obtain
nutrients
and
disseminates
through
airborne
conidia
in
nature.
Bacillus
amyloliquefaciens
strain
GD4a,
a
beneficial
bacterium
isolated
from
switchgrass,
shows
great
potential
managing
GMD
plants.
However,
precise
mechanism
by
which
GD4a
confers
benefits
remains
elusive.
In
this
study,
an
A.
thaliana-B.
cinerea-B.
multiple-scale
interaction
model
was
used
explore
how
bacteria
play
essential
roles
plant
growth
promotion,
pathogen
suppression,
immunity
boosting.
Arabidopsis
Col-0
wild-type
served
as
testing
ground
assess
GD4a’s
efficacy.
Additionally,
bacterial
enzyme
activity
targeted
metabolite
tests
were
conducted
validate
for
enhancing
suppressing
pathogens
diseases.
subjected
co-incubation
with
various
bacterial,
fungal,
oomycete
evaluate
its
antagonistic
effectiveness
vitro.
vivo
inoculation
assays
also
carried
out
investigate
role
regulating
host
immunity.
Bacterial
extracellular
exudate
(BEE)
extracted,
purified,
untargeted
metabolomics
analysis.
Benzocaine
(BEN)
analysis
selected
further
study
function
related
mechanisms
mutant
qRT-PCR
Finally,
comprehensive
formulated
summarize
applying
agricultural
systems.
Our
demonstrates
efficacy
growth,
diseases,
bolstering
Importantly,
produces
functional
that
significantly
disrupts
pathogenicity
B.
cinerea
inhibiting
fungal
conidium
germination
hypha
formation.
our
identifies
benzocaine
novel
small
molecule
triggers
basal
defense,
ISR,
SAR
responses
can
effectively
promote
suppress
disease,
boost
BEE
production
diverse
gene
expression.
Abstract
Background
Despite
more
than
50
years
of
research,
no
robust
evidence
suggests
that
inoculation
cereals
and
other
non-legumes
with
free-living
and/or
endophytic
bacteria
leads
to
fixation
agronomically
significant
quantities
dinitrogen
gas
(N
2
)
from
the
atmosphere.
A
plethora
new
products
claims
increase
growth
yields
major
crops
through
stimulating
N
-fixation
by
inoculating
bacteria.
Scope
We
review
literature
on
in
rhizosphere
as
endophytes
non-legume
plants.
find
unequivocal
these
fix
agriculturally
amounts
atmosphere
non-legumes.
Research
since
1930s
has
followed
repeated,
overlapping
cycles
have
concluded
plant-growth-promoting
hormones
were
primary
reason
for
crop
response
microbial
inoculants.
Conclusion
contend
regulations
are
required
prevent
sale
inoculant
unsubstantiated
spurious
claims.
Such
should
require
is
provided
independently
verified,
that:
(i)
bacterium
can
(i.e.
it
possesses
all
genes
make
nitrogenase),
(ii)
a
clear
mechanism
protect
nitrogenase
poisoning
free
oxygen,
(iii)
present
sufficient
numbers
throughout
cycle
plant,
(iv)
enhanced
respiration
be
detected
putative
-fixing
tissues,
(v)
growing
an
N-free
medium
prolific
accumulation
nitrogen,
(vi)
one
method
used
confirm
quantitatively
inputs
field.
Environmental Science & Technology,
Год журнала:
2023,
Номер
58(1), С. 160 - 170
Опубликована: Дек. 26, 2023
Pesticides
and
antibiotics
are
believed
to
increase
the
incidence
of
antibiotic
resistance
genes
(ARGs)
virulence
factor
(VFGs),
constituting
a
serious
threat
global
health.
However,
impact
this
combined
pollution
on
microbiome
that
related
ARGs
VFGs
soil–plant–animal
systems
remain
unknown.
In
study,
60-day
microcosm
experiment
was
conducted
reveal
effects
zinc
thiazole
(ZT)
oxytetracycline
(OTC)
microbial
communities,
resistomes,
factors
in
soil,
earthworm
gut,
phyllosphere
samples
using
metagenomics.
ZT
exposure
perturbed
communities
nutrient
metabolism
increased
abundance
gut.
Combined
changed
profiles
by
decreasing
diversity
phyllosphere.
Host-tracking
analysis
identified
some
genera,
such
as
Citrobacter
Aeromonas,
frequent
hosts
Notably,
co-occurrence
patterns
MGEs
were
observed
metagenome-assembled
contigs.
More
importantly,
markedly
potentially
drug-resistant
pathogens
Acinetobacter
soli
junii
Overall,
study
expands
our
current
understanding
spread
under
pollutant-induced
stress
associated
health
risks.
Current Research in Microbial Sciences,
Год журнала:
2024,
Номер
6, С. 100236 - 100236
Опубликована: Янв. 1, 2024
Plants
have
a
microbiome,
diverse
community
of
microorganisms,
including
bacteria,
fungi,
and
viruses,
living
inside
on
their
tissues.
Versatile
endophytic
microorganisms
inhabited
in
every
plant
part
without
causing
disease
develop
microbiome
or
endo-microbiome.
Plant
endo-microbiome
are
drawn
by
the
nutrient
rich
micro-environment,
turn
some
microbes
mutualistically
endorse
protect
from
adverse
environmental
stresses.
interact
within
well-designed
host
equilibrium
containing
xylem,
phloem,
nutrients,
phytohormones,
metabolites
shift
according
to
nutritional
change.
regulate
respond
variations,
pathogens,
herbivores
producing
stress
regulators,
organic
acids,
secondary
metabolites,
hormones
as
well
unknown
substances
signalling
molecules.
Endomicrobiome
efficiently
synthesizes
multiple
bioactive
compounds,
phytohormones
with
high
competence.
The
technological
innovation
next
generation
genomics
biology
high-throughput
multiomics
techniques
stepping
stones
illumination
critical
communities
functional
characterization
that
aid
improving
physiology,
biochemistry
immunity
interplay
for
best
crop
productivity.
This
review
article
contains
deeper
insight
endomicrobiome
related
research
work
last
years,
recruitment,
niche
development,
dynamics,
removal
mechanisms,
services
health
architecture
communication,
resilient
future
crop.
Global Change Biology,
Год журнала:
2024,
Номер
30(3)
Опубликована: Март 1, 2024
Abstract
Symbiotic
nitrogen
(N)
fixation
(SNF),
replenishing
bioavailable
N
for
terrestrial
ecosystems,
exerts
decisive
roles
in
cycling
and
gross
primary
production.
Nevertheless,
it
remains
unclear
what
determines
the
variability
of
SNF
rate,
which
retards
accurate
prediction
global
earth
system
models.
This
study
synthesized
1230
isotopic
observations
to
elucidate
governing
factors
underlying
rate.
The
rates
varied
significantly
from
3.69
12.54
g
m
−2
year
−1
across
host
plant
taxa.
traits
(e.g.
biomass
characteristics
taxa)
far
outweighed
soil
properties
climatic
explaining
variations
accounting
79.0%
total
relative
importance.
Furthermore,
annual
yield
contributed
more
than
half
uptake
plants,
was
consistent
different
ecosystem
types.
highlights
that
biotic
factors,
especially
taxa),
play
overriding
determining
rate
compared
with
properties.
suite
parameters
lends
support
improve
module
models
can
provide
confidence
predicting
changes
ecosystems.
Frontiers in Microbiology,
Год журнала:
2025,
Номер
15
Опубликована: Янв. 8, 2025
Heterobasidion
annosum
species
complex
has
been
regarded
as
the
most
destructive
disease
agent
of
conifer
trees
in
boreal
forests.
Tree
microbiome
can
regulate
plant-pathogen
interactions
by
influencing
both
host
resistance
and
pathogen
virulence.
Such
information
would
help
to
improve
future
health
forests
explore
strategies
enhance
ecosystem
stability.
In
this
study,
using
next-generation
sequencing
technology,
we
investigated
microbial
community
different
tree
regions
(needles,
upper
stem,
lower
stem)
Norway
spruce
with
without
wood
decay
symptoms.
The
primary
purpose
was
uncover
signature
characteristic
harbored
asymptomatic
compared
diseased
trees.
Additionally,
study
inter-kingdom
intra-kingdom
(bacteria
fungi)
symptomatic
versus
results
showed
that
richness
(Chao1)
fungi
bacteria
were
higher
than
(P
<
0.05).
Compared
trees,
a
abundance
Actinobacteriota,
bacterial
genera
Methylocella,
Conexibacter,
Jatrophihabitans,
fungal
Mollisia.
Fungal
communities
from
same
anatomic
region
differed
between
Bacterial
two
stem
also
distinct
possessed
less
stable
network
more
positive
correlations
at
level,
distribution
correlation
numbers
even
network.
conclusion,
attack
decreased
shifted
structure
functional
varying
degrees.
enlarged
became
unstable
level
due
infection.