Optimization of highly efficient exogenous-DNA-free Cas9-ribonucleoprotein mediated gene editing in disease susceptibility loci in wheat (Triticum aestivum L.) DOI Creative Commons

Snigdha Poddar,

Jaclyn Tanaka, Katherine L. D. Running

и другие.

Frontiers in Plant Science, Год журнала: 2023, Номер 13

Опубликована: Янв. 10, 2023

The advancement of precision engineering for crop trait improvement is important in the face rapid population growth, climate change, and disease. To this end, targeted double-stranded break technology using RNA-guided Cas9 has been adopted widely genome editing plants. Agrobacterium or particle bombardment-based delivery plasmids encoding guide RNA (gRNA) common, but requires optimization expression often results random integration plasmid DNA into plant genome. Recent advances have described gene by gRNA as pre-assembled ribonucleoproteins (RNPs) various tissues, with moderate efficiency resulting regenerated In report we describe significant improvements to Cas9-RNP mediated wheat. We demonstrate that assays protoplasts are a fast effective tool rational selection optimal gRNAs regenerable immature embryos (IEs), high temperature treatment enhances rates both tissue types. also show Cas9-mediated persists at least 14 days gold bombarded wheat IEs. edited plants work recovered absence exogenous selection. With method, produce knockouts set three homoeologous genes two pathogenic effector susceptibility genes, insensitivity corresponding necrotrophic effectors produced Parastagonospora nodorum. establishment highly efficient, DNA-free holds promise accelerated diversity production an expansive array crops.

Язык: Английский

CRISPR/Cas genome editing in soybean: Challenges and new insights to overcome existing bottlenecks DOI Creative Commons

Nayara S. Freitas-Alves,

Clídia E. Moreira-Pinto,

Fabiano T. P. K. Távora

и другие.

Journal of Advanced Research, Год журнала: 2024, Номер unknown

Опубликована: Авг. 1, 2024

Soybean is a worldwide-cultivated crop due to its applications in the food, feed, and biodiesel industries. Genome editing soybean began with ZFN TALEN technologies; however, CRISPR/Cas has emerged shortly became preferable approach for genome manipulation since it more precise, easy handle, cost-effective. Recent reports have focused on conventional Cas9 nuclease, nickase (nCas9) derived base editors, Cas12a (formally Cpf1) as most commonly used editors soybean. Nonetheless, several challenges complex plant genetic engineering pipeline need be overcome effectively edit of an elite cultivar. These include (1) optimizing CRISPR cassette design (i.e., gRNA Cas promoters, testing, number gRNAs, binary vector), (2) improving transformation frequency, (3) increasing efficiency ratio targeted cells, (4) production.

Язык: Английский

Процитировано

7

An efficient mRNA delivery system for genome editing in plants DOI Creative Commons

Fengti Qiu,

Chenxiao Xue,

Jin‐Xing Liu

и другие.

Plant Biotechnology Journal, Год журнала: 2025, Номер unknown

Опубликована: Фев. 10, 2025

Summary Transgene‐free genome editing is important for crop improvement as it reduces unanticipated genomic changes. While mRNA delivery systems offer a powerful method achieving transgene‐free editing, they remain inefficient and challenging in plants. Here we describe an efficient system plants with substantially improved efficiency. By optimizing the 5′ untranslated regions (5′UTRs) poly(A) tails of vitro ‐transcribed (IVT) mRNAs coating protamine during particle bombardment, have developed optimized termed v2_TMV/DEN2. This enhanced efficiencies knock‐out, A‐to‐G C‐to‐T base by average 4.7‐, 3.4‐ 2.5‐fold at various endogenous sites compared plasmid‐based transient via bombardment rice suspension cells wheat immature embryos 48 h post‐transformation. Furthermore, obtained edited 5.0–180.8% 26.1–26.2% using v2_TMV/DEN2 wheat, respectively, 0.0–43.2% 4.7–10.4% plasmids. Our study provides convenient

Язык: Английский

Процитировано

1

Advances in gene editing without residual transgenes in plants DOI Open Access
Yubing He, Michael Mudgett, Yunde Zhao

и другие.

PLANT PHYSIOLOGY, Год журнала: 2021, Номер 188(4), С. 1757 - 1768

Опубликована: Дек. 7, 2021

Abstract Transgene residuals in edited plants affect genetic analysis, pose off-target risks, and cause regulatory concerns. Several strategies have been developed to efficiently edit target genes without leaving any transgenes plants. Some approaches directly address this issue by editing plant genomes with DNA-free reagents. On the other hand, DNA-based techniques require another step for ensuring are transgene-free. Fluorescent markers, pigments, chemical treatments all employed as tools distinguish transgenic from transgene-free quickly easily. Moreover, suicide used trigger self-elimination of plants, greatly improving efficiency isolating desired Transgenes can also be excised using site-specific recombination, transposition or gene nucleases, providing a strategy asexually produced Finally, haploid induction coupled may make it feasible that recalcitrant transformation. Here, we evaluate strengths weaknesses recently obtaining transgene residuals.

Язык: Английский

Процитировано

35

Establishment of an efficient transformation system and its application in regulatory mechanism analysis of biological macromolecules in tea plants DOI
Haijie Ma,

Ningge Liu,

Xuepeng Sun

и другие.

International Journal of Biological Macromolecules, Год журнала: 2023, Номер 244, С. 125372 - 125372

Опубликована: Июнь 15, 2023

Язык: Английский

Процитировано

16

Optimization of highly efficient exogenous-DNA-free Cas9-ribonucleoprotein mediated gene editing in disease susceptibility loci in wheat (Triticum aestivum L.) DOI Creative Commons

Snigdha Poddar,

Jaclyn Tanaka, Katherine L. D. Running

и другие.

Frontiers in Plant Science, Год журнала: 2023, Номер 13

Опубликована: Янв. 10, 2023

The advancement of precision engineering for crop trait improvement is important in the face rapid population growth, climate change, and disease. To this end, targeted double-stranded break technology using RNA-guided Cas9 has been adopted widely genome editing plants. Agrobacterium or particle bombardment-based delivery plasmids encoding guide RNA (gRNA) common, but requires optimization expression often results random integration plasmid DNA into plant genome. Recent advances have described gene by gRNA as pre-assembled ribonucleoproteins (RNPs) various tissues, with moderate efficiency resulting regenerated In report we describe significant improvements to Cas9-RNP mediated wheat. We demonstrate that assays protoplasts are a fast effective tool rational selection optimal gRNAs regenerable immature embryos (IEs), high temperature treatment enhances rates both tissue types. also show Cas9-mediated persists at least 14 days gold bombarded wheat IEs. edited plants work recovered absence exogenous selection. With method, produce knockouts set three homoeologous genes two pathogenic effector susceptibility genes, insensitivity corresponding necrotrophic effectors produced Parastagonospora nodorum. establishment highly efficient, DNA-free holds promise accelerated diversity production an expansive array crops.

Язык: Английский

Процитировано

14