Advances, challenges, and opportunities for food safety analysis in the isothermal nucleic acid amplification/CRISPR-Cas12a era DOI

Pengpeng Xue,

Yubo Peng, Renjing Wang

и другие.

Critical Reviews in Food Science and Nutrition, Год журнала: 2024, Номер unknown, С. 1 - 16

Опубликована: Апрель 24, 2024

Global food safety stands out as a prominent public concern, affecting populations worldwide. The recurrent challenge of incidents reveals the need for robust inspection framework. In recent years, integration isothermal nucleic acid amplification with CRISPR-Cas12a techniques has emerged promising tool molecular detection hazards, presenting next generation biosensing detection. This paper provides comprehensive review current state research on synergistic application and technology in field safety. innovative combination not only enriches analytical tools, but also improving assay performance such sensitivity specificity, addressing limitations traditional methods. summarized various methodologies by diverse concerns, including pathogenic bacterium, viruses, mycotoxins, adulteration, genetically modified foods. Each section elucidates specific strategies employed highlights advantages conferred. Furthermore, discussed challenges faced this context safety, offering insightful discussions potential solutions future prospects.

Язык: Английский

Argonaute-triggered visual and rebuilding-free foodborne pathogenic bacteria detection DOI
Yaru Li,

Jun Kou,

Han Xiao

и другие.

Journal of Hazardous Materials, Год журнала: 2023, Номер 454, С. 131485 - 131485

Опубликована: Апрель 25, 2023

Язык: Английский

Процитировано

64

Programmable Entropy-Driven Circuit-Cascaded Self-Feedback DNAzyme Network for Ultra-Sensitive Fluorescence and Photoelectrochemical Dual-Mode Biosensing DOI

Defu Qian,

Jingling Zhang,

Guoshuai Sun

и другие.

Analytical Chemistry, Год журнала: 2024, Номер 96(18), С. 7274 - 7280

Опубликована: Апрель 24, 2024

Inspired by natural DNA networks, programmable artificial networks have become an attractive tool for developing high-performance biosensors. However, there is still a lot of room expansion in terms sensitivity, atom economy, and result self-validation current microRNA sensors. In this protocol, miRNA-122 as target model, ultrasensitive fluorescence (FL) photoelectrochemical (PEC) dual-mode biosensing platform developed using entropy-driven circuit (EDC) cascaded self-feedback DNAzyme network. The well-designed EDC realizes full utilization the strands improves atomic economy signal amplification system. unique rational design double-CdSe quantum-dot-released substrate network significantly avoids high background signals enhances sensitivity specificity. Also, enzyme-free, effectively risk leakage accuracy sensor. Moreover, introduction superparamagnetic Fe

Язык: Английский

Процитировано

25

CRISPR/Cas12a-based biosensors for environmental monitoring and diagnostics DOI Creative Commons
Atif Khurshid Wani, Nahid Akhtar, Tahir ul Gani Mir

и другие.

Environmental Technology & Innovation, Год журнала: 2024, Номер 34, С. 103625 - 103625

Опубликована: Апрель 4, 2024

Contaminants, such as nucleic acids or toxic small molecules, threaten both human health and ecosystems when they infiltrate the environment. The precise highly sensitive identification of contaminants holds paramount importance across diverse domains, including safeguarding food integrity, facilitating clinical diagnostics, monitoring environmental conditions. Traditional methodologies, encompassing spectroscopy, chromatography, sequencing, metagenomics, have conventionally served pivotal roles in detection processes. Nevertheless, these methods encountered recurring challenges related to sensitivity, specificity, portability. This review focuses on groundbreaking CRISPR/Cas12-based biosensors. These biosensors leverage incredible precision programmability CRISPR/Cas system recognize specific targets. Here, we comprehensively assess fundamental mechanisms that enable detection, ranging from guide RNA design collateral cleavage. versatility CRISPR/Cas12 becomes evident through their applications. applications encompass medical safety, monitoring. transition conventional ultimately represents a significant milestone contaminant detection. By incorporating molecular biology, nanotechnology, bioinformatics, potential reshape landscape water CRIPSR-Cas diagnostics is transformative technology paves way for safer healthier future environment life.

Язык: Английский

Процитировано

23

Challenges and perspectives of CRISPR-based technology for diagnostic applications DOI Creative Commons

Stefano Del Giovane,

Neda Bagheri, Andrea C. Di Pede

и другие.

TrAC Trends in Analytical Chemistry, Год журнала: 2024, Номер 172, С. 117594 - 117594

Опубликована: Фев. 8, 2024

The precision and versatility of CRISPR-based techniques, combined with the advantages nucleic acid-based nanotechnology, hold great promise in transforming landscape molecular diagnostics. While significant progress has been made, current platforms primarly focus on acid detection. To expand applicability fully leverage offered by diagnostics, ongoing efforts explore strategies to develop CRISPR sensors capable detecting a diverse range analytes beyond acids. In addition, challenges still persist adaptation for point-of-care (POC) applications, involving concerns such as portability automation, well complexities associated multiplexing. Here, we provide detailed classification comprehensive discussion facilitating conversion non-nucleic target binding into CRISPR-powered outputs an emphasis their corresponding design principles. Furthermore, second part review outlines potential solutions seamlessly integrating these user-friendly rapid tests specifically tailored (POC).

Язык: Английский

Процитировано

19

CRISPR/Cas System: The Accelerator for the Development of Non-nucleic Acid Target Detection in Food Safety DOI
Yaru Li,

Zhiying Zhao,

Yajie Liu

и другие.

Journal of Agricultural and Food Chemistry, Год журнала: 2023, Номер 71(37), С. 13577 - 13594

Опубликована: Сен. 1, 2023

Non-nucleic acid targets have posed a serious challenge to food safety. The detection of non-nucleic can enable us monitor contamination in timely manner. In recent years, the CRISPR/Cas system has been extensively explored biosensing. However, there is lack summary CRISPR/Cas-powered tailored involved This review comprehensively summarizes advances on construction and promising applications field safety related targets. current challenges futuristic perspectives are also proposed accordingly. rapidly evolving provided powerful propellant for target via integration with aptamer and/or DNAzyme. Compared traditional analytical methods, conceptually novel, essentially eliminates dependence large instruments, demonstrates capability rapid, accurate, sensitive, on-site testing.

Язык: Английский

Процитировано

35

Nanomaterials-assisted CRISPR/Cas detection for food safety: Advances, challenges and future prospects DOI

Zhiying Zhao,

Minghui Lu, Nan Wang

и другие.

TrAC Trends in Analytical Chemistry, Год журнала: 2023, Номер 167, С. 117269 - 117269

Опубликована: Сен. 7, 2023

Язык: Английский

Процитировано

32

Argonaute-DNAzyme tandem biosensing for highly sensitive and simultaneous dual-gene detection of methicillin-resistant Staphylococcus aureus DOI
Yaru Li, Xiaoqin Tang,

Nan Wang

и другие.

Biosensors and Bioelectronics, Год журнала: 2023, Номер 244, С. 115758 - 115758

Опубликована: Окт. 26, 2023

Язык: Английский

Процитировано

32

CRISPR/Cas-based nanobiosensors: A reinforced approach for specific and sensitive recognition of mycotoxins DOI

Ma Haowei,

Shadi Ebrahimi, Sofiène Mansouri

и другие.

Food Bioscience, Год журнала: 2023, Номер 56, С. 103110 - 103110

Опубликована: Сен. 9, 2023

Язык: Английский

Процитировано

31

A CRISPR/dCas9‐enabled, on‐site, visual, and bimodal biosensing strategy for ultrasensitive and self‐validating detection of foodborne pathogenic bacteria DOI Creative Commons
Yaru Li,

Jiali Qiao,

Zhiying Zhao

и другие.

Food Frontiers, Год журнала: 2023, Номер 4(4), С. 2070 - 2080

Опубликована: Июнь 27, 2023

Abstract It is imperative to develop practicable pathogenic bacteria detection methods. We devised a biosensor for the ultrasensitive of Salmonella typhimurium ( S. typhi ), termed as SCOUT‐dCas9 (ultrasensitive, cross‐validating, on‐site, and dUal‐mode test using CRISPR/dCas9). Simply, species‐specific invA gene was amplified loop‐mediated isothermal amplification with biotinylated primer, which can be specifically “pulled down” by “antibody‐like” dCas9‐single guide RNA form ternary complex. SYBR Green I streptavidin‐modified alkaline phosphatase were used functionalize them generate fluorescent colorimetric signals, respectively. With this strategy, target could dexterously converted into bimodal signals that cross‐validated afford more reliable results. For both modes, able detect low 1 CFU/mL dynamic range from 10 9 CFU/mL. Lastly, had satisfactory selectivity capable detecting ‐contaminated real food samples. provides robust platform bacterial detection.

Язык: Английский

Процитировано

26

Tandem CRISPR nucleases-based lateral flow assay for amplification-free miRNA detection via the designed “locked RNA/DNA” as fuels DOI

Benshun Tian,

Yuxin Wang, Wuyue Tang

и другие.

Talanta, Год журнала: 2023, Номер 266, С. 124995 - 124995

Опубликована: Июль 28, 2023

Язык: Английский

Процитировано

26