Sources of airborne microorganisms in the built environment DOI Creative Commons
Aaron J. Prussin, Linsey C. Marr

Microbiome, Год журнала: 2015, Номер 3(1)

Опубликована: Дек. 1, 2015

Each day people are exposed to millions of bioaerosols, including whole microorganisms, which can have both beneficial and detrimental effects. The next chapter in understanding the airborne microbiome built environment is characterizing various sources microorganisms relative contribution each. We identified following eight major categories bacteria, viruses, fungi environment: humans; pets; plants; plumbing systems; heating, ventilation, air-conditioning mold; dust resuspension; outdoor environment. Certain species associated with certain sources, but full potential source characterization apportionment has not yet been realized. Ideally, future studies will quantify detailed emission rates from each identify indoor air microbiome. This information could then be used probe fundamental relationships between specific human health, design interventions improve building health or even provide evidence for forensic investigations.

Язык: Английский

The human skin microbiome DOI Open Access
Allyson L. Byrd, Yasmine Belkaid, Julia A. Segre

и другие.

Nature Reviews Microbiology, Год журнала: 2018, Номер 16(3), С. 143 - 155

Опубликована: Янв. 15, 2018

Язык: Английский

Процитировано

2073

The healthy human microbiome DOI Creative Commons
Jason Lloyd‐Price, Galeb Abu-Ali, Curtis Huttenhower

и другие.

Genome Medicine, Год журнала: 2016, Номер 8(1)

Опубликована: Апрель 27, 2016

Humans are virtually identical in their genetic makeup, yet the small differences our DNA give rise to tremendous phenotypic diversity across human population. By contrast, metagenome of microbiome—the total content microbes inhabiting bodies—is quite a bit more variable, with only third its constituent genes found majority healthy individuals. Understanding this variability “healthy microbiome” has thus been major challenge microbiome research, dating back at least 1960s, continuing through Human Microbiome Project and beyond. Cataloguing necessary sufficient sets features that support health, normal ranges these populations, is an essential first step identifying correcting microbial configurations implicated disease. Toward goal, several population-scale studies have documented both taxonomic compositions functional potentials normally observed microbiomes along possible driving factors such as geography, diet, lifestyle. Here, we review definitions ‘healthy microbiome’ emerged, current understanding diversity, gaps characterization molecular function development ecological therapies be addressed future.

Язык: Английский

Процитировано

1561

Gut microbiota and IBD: causation or correlation? DOI
Josephine Ni, Gary D. Wu, Lindsey Albenberg

и другие.

Nature Reviews Gastroenterology & Hepatology, Год журнала: 2017, Номер 14(10), С. 573 - 584

Опубликована: Июль 19, 2017

Язык: Английский

Процитировано

1400

Multiorganismal Insects: Diversity and Function of Resident Microorganisms DOI Open Access
Angela E. Douglas

Annual Review of Entomology, Год журнала: 2014, Номер 60(1), С. 17 - 34

Опубликована: Окт. 23, 2014

All insects are colonized by microorganisms on the insect exoskeleton, in gut and hemocoel, within cells. The microbiota is generally different from external environment, including ingested food. Specifically, certain microbial taxa favored conditions resources habitat, their tolerance of immunity, specific mechanisms for transmission. resident can promote fitness contributing to nutrition, especially providing essential amino acids, B vitamins, and, fungal partners, sterols. Some protect hosts against pathogens, parasitoids, other parasites synthesizing toxins or modifying immune system. Priorities future research include elucidation contributions detoxification, plant allelochemicals phytophagous insects, resistance pathogens; as well role among-insect communication; potential value manipulation control pests.

Язык: Английский

Процитировано

1087

Biogeography and individuality shape function in the human skin metagenome DOI
Julia Oh, Allyson L. Byrd, Clay Deming

и другие.

Nature, Год журнала: 2014, Номер 514(7520), С. 59 - 64

Опубликована: Сен. 30, 2014

Язык: Английский

Процитировано

992

New evidences on the altered gut microbiota in autism spectrum disorders DOI Creative Commons
Francesco Strati, Duccio Cavalieri, Davide Albanese

и другие.

Microbiome, Год журнала: 2017, Номер 5(1)

Опубликована: Фев. 22, 2017

Autism spectrum disorders (ASDs) are neurodevelopmental conditions characterized by social and behavioural impairments. In addition to neurological symptoms, ASD subjects frequently suffer from gastrointestinal abnormalities, thus implying a role of the gut microbiota in pathophysiology. Here, we bacterial fungal cohort autistic individuals demonstrating presence an altered microbial community structure. A fraction 90% were classified as severe ASDs. We found significant increase Firmicutes/Bacteroidetes ratio due reduction Bacteroidetes relative abundance. At genus level, observed decrease abundance Alistipes, Bilophila, Dialister, Parabacteroides, Veillonella cohort, while Collinsella, Corynebacterium, Dorea, Lactobacillus significantly increased. Constipation has been then associated with different patterns neurotypical subjects, constipated high levels taxa belonging Escherichia/Shigella Clostridium cluster XVIII. also that Candida was more than double yet larger dispersion values, this difference only partially significant. The finding that, besides microbiota, mycobiota contributes alteration intestinal structure ASDs opens possibility for new potential intervention strategies aimed at relief symptoms

Язык: Английский

Процитировано

879

Temporal Stability of the Human Skin Microbiome DOI Creative Commons
Julia Oh, Allyson L. Byrd,

Morgan Park

и другие.

Cell, Год журнала: 2016, Номер 165(4), С. 854 - 866

Опубликована: Май 1, 2016

Язык: Английский

Процитировано

873

The gut mycobiome of the Human Microbiome Project healthy cohort DOI Creative Commons

Andrea K. Nash,

Thomas A. Auchtung,

Matthew C. Wong

и другие.

Microbiome, Год журнала: 2017, Номер 5(1)

Опубликована: Ноя. 25, 2017

Most studies describing the human gut microbiome in healthy and diseased states have emphasized bacterial component, but fungal (i.e., mycobiome) is beginning to gain recognition as a fundamental part of our microbiome. To date, mycobiome primarily been disease centric or small cohorts individuals. contribute existing knowledge mycobiome, we investigated Human Microbiome Project (HMP) cohort by sequencing Internal Transcribed Spacer 2 (ITS2) region well 18S rRNA gene.Three hundred seventeen HMP stool samples were analyzed ITS2 sequencing. Fecal diversity was significantly lower comparison diversity. Yeast dominated samples, comprising eight top 15 most abundant genera. Specifically, communities characterized high prevalence Saccharomyces, Malassezia, Candida, with S. cerevisiae, M. restricta, C. albicans operational taxonomic units (OTUs) present 96.8, 88.3, 80.8% respectively. There degree inter- intra-volunteer variability communities. However, OTUs found 92.2, 78.3, 63.6% volunteers, respectively, all donated over an approximately 1-year period. Metagenomic gene data agreed results; however, provided greater resolution relatively low abundance constituents.Compared communities, yeast including Candida. Both high, revealing that unlike individual's no more similar itself time than another person's. Nonetheless, several species persisted across majority evidence core may exist. membership compared metagenomic data, suggesting it sensitive method for studying samples.

Язык: Английский

Процитировано

794

Mechanisms regulating skin immunity and inflammation DOI Open Access
Manolis Pasparakis, Ingo Haase, Frank O. Nestlé

и другие.

Nature reviews. Immunology, Год журнала: 2014, Номер 14(5), С. 289 - 301

Опубликована: Апрель 11, 2014

Язык: Английский

Процитировано

761

The mycobiota: interactions between commensal fungi and the host immune system DOI
David M. Underhill, Iliyan D. Iliev

Nature reviews. Immunology, Год журнала: 2014, Номер 14(6), С. 405 - 416

Опубликована: Май 23, 2014

Язык: Английский

Процитировано

611