Targeting Chromatin-Remodeling Factors in Cancer Cells: Promising Molecules in Cancer Therapy DOI Open Access

Fang-Lin Zhang,

Da‐Qiang Li

International Journal of Molecular Sciences, Год журнала: 2022, Номер 23(21), С. 12815 - 12815

Опубликована: Окт. 24, 2022

ATP-dependent chromatin-remodeling complexes can reorganize and remodel chromatin thereby act as important regulator in various cellular processes. Based on considerable studies over the past two decades, it has been confirmed that abnormal function of remodeling plays a pivotal role genome reprogramming for oncogenesis cancer development and/or resistance to therapy. Recently, exciting progress made identification genetic alteration genes encoding associated with tumorigenesis, well our understanding mechanisms biology. Here, we present preclinical evidence explaining signaling involving misregulation-induced processes, including DNA damage signaling, metastasis, angiogenesis, immune etc. However, even though cumulative this field provides promising emerging molecules therapeutic explorations cancer, more research is needed assess clinical roles these targets.

Язык: Английский

Mechanisms of lncRNA biogenesis as revealed by nascent transcriptomics DOI
Takayuki Nojima, Nicholas Proudfoot

Nature Reviews Molecular Cell Biology, Год журнала: 2022, Номер 23(6), С. 389 - 406

Опубликована: Янв. 25, 2022

Язык: Английский

Процитировано

289

Sources, resolution and physiological relevance of R-loops and RNA–DNA hybrids DOI
Eva Petermann, Li Lan, Lee Zou

и другие.

Nature Reviews Molecular Cell Biology, Год журнала: 2022, Номер 23(8), С. 521 - 540

Опубликована: Апрель 22, 2022

Язык: Английский

Процитировано

232

Walking a tightrope: The complex balancing act of R-loops in genome stability DOI Creative Commons
Joshua R. Brickner, Jada L. Garzon, Karlene A. Cimprich

и другие.

Molecular Cell, Год журнала: 2022, Номер 82(12), С. 2267 - 2297

Опубликована: Май 3, 2022

Язык: Английский

Процитировано

150

R-loop proximity proteomics identifies a role of DDX41 in transcription-associated genomic instability DOI Creative Commons
Thorsten Mosler, Francesca Conte, Gabriel M. C. Longo

и другие.

Nature Communications, Год журнала: 2021, Номер 12(1)

Опубликована: Дек. 16, 2021

Transcription poses a threat to genomic stability through the formation of R-loops that can obstruct progression replication forks. are three-stranded nucleic acid structures formed by an RNA-DNA hybrid with displaced non-template DNA strand. We developed Proximity Proteomics map R-loop proximal proteome human cells using quantitative mass spectrometry. implicate different cellular proteins in regulation and identify role tumor suppressor DDX41 opposing double strand break accumulation promoters. is enriched promoter regions vivo, unwind hybrids vitro. upon loss accompanied stress, increase breaks transcriptome changes associated inflammatory response. Germline loss-of-function mutations lead predisposition acute myeloid leukemia adulthood. propose instability-associated response may contribute development familial AML mutated DDX41.

Язык: Английский

Процитировано

115

ARID1A suppresses R-loop-mediated STING-type I interferon pathway activation of anti-tumor immunity DOI

Matthew B. Maxwell,

Marianne S. Hom, Jawoon Yi

и другие.

Cell, Год журнала: 2024, Номер 187(13), С. 3390 - 3408.e19

Опубликована: Май 15, 2024

Язык: Английский

Процитировано

30

The ARID1A-METTL3-m6A axis ensures effective RNase H1-mediated resolution of R-loops and genome stability DOI Creative Commons
Jun Zhang, Feng Chen, Ming Tang

и другие.

Cell Reports, Год журнала: 2024, Номер 43(2), С. 113779 - 113779

Опубликована: Фев. 1, 2024

R-loops are three-stranded structures that can pose threats to genome stability. RNase H1 precisely recognizes drive their resolution within the genome, but underlying mechanism is unclear. Here, we report ARID1A with high affinity in an ATM-dependent manner. recruits METTL3 and METTL14 R-loop, leading m6A methylation of R-loop RNA. This modification facilitates recruitment driving its promoting DNA end resection at DSBs, thereby ensuring Depletion ARID1A, METTL3, or leads accumulation reduced cell survival upon exposure cytotoxic agents. Therefore, function a coordinated, temporal order DSB sites recruit ensure efficient resolution. Given association levels resistance genotoxic therapies patients, these findings open avenues for exploring potential therapeutic strategies cancers abnormalities.

Язык: Английский

Процитировано

21

The Role of SWI/SNF Complex in Bladder Cancer DOI Creative Commons

Zhenlain Lei,

Yanfeng Han, John B. Liao

и другие.

Journal of Cellular and Molecular Medicine, Год журнала: 2025, Номер 29(1)

Опубликована: Янв. 1, 2025

ABSTRACT Bladder cancer originates from bladder tissues and is the ninth most common type of worldwide. The SWI/SNF (SWItch/sucrose non‐ fermentable) complex plays a crucial role in regulating various biological processes, such as cell cycle control, DNA damage repair transcription regulation. purpose this article to examine functional studies cancer, highlighting new pathways for creating personalised treatment approaches patients with mutations complex. By acquiring comprehensive understanding mechanisms we can offer more precise effective solutions treat disease.

Язык: Английский

Процитировано

2

Defining R-loop classes and their contributions to genome instability DOI
Daisy Castillo-Guzman, Frédéric Chédin

DNA repair, Год журнала: 2021, Номер 106, С. 103182 - 103182

Опубликована: Июль 17, 2021

Язык: Английский

Процитировано

75

Treating ARID1A mutated cancers by harnessing synthetic lethality and DNA damage response DOI Creative Commons
Jayaprakash Mandal,

Prativa Mandal,

Tian‐Li Wang

и другие.

Journal of Biomedical Science, Год журнала: 2022, Номер 29(1)

Опубликована: Сен. 19, 2022

Abstract Chromatin remodeling is an essential cellular process for organizing chromatin structure into either open or close configuration at specific locations by orchestrating and modifying histone complexes. This task responsible fundamental cell physiology including transcription, DNA replication, methylation, damage repair. Aberrations in this activity have emerged as epigenomic mechanisms cancer development that increase tumor clonal fitness adaptability amidst various selection pressures. Inactivating mutations AT-rich interaction domain 1A ( ARID1A ), a gene encoding large nuclear protein member belonging to the SWI/SNF complex, result its loss of expression. most commonly mutated remodeler gene, exhibiting highest mutation frequency endometrium-related uterine ovarian carcinomas. As suppressor regulating cycle, facilitating repair, controlling expression genes are maintaining differentiation homeostasis non-transformed cells. Thus, deficiency due somatic propels progression dissemination. The recent success PARP inhibitors treating homologous recombination repair-deficient tumors has engendered keen interest developing synthetic lethality-based therapeutic strategies -mutated neoplasms. In review, we summarize advances understanding biology development, with special emphasis on roles We also discuss harness lethal future therapeutics against cancers.

Язык: Английский

Процитировано

56

Epstein-Barr virus BNRF1 destabilizes SMC5/6 cohesin complexes to evade its restriction of replication compartments DOI Creative Commons
Stephanie Pei Tung Yiu, Rui Guo,

Cassie Zerbe

и другие.

Cell Reports, Год журнала: 2022, Номер 38(10), С. 110411 - 110411

Опубликована: Март 1, 2022

Epstein-Barr virus (EBV) persistently infects people worldwide. Delivery of ∼170-kb EBV genomes to nuclei and use nuclear membrane-less replication compartments (RCs) for their lytic cycle amplification necessitate evasion intrinsic antiviral responses. Proteomics analysis indicates that, upon B cell infection or reactivation, depletes the cohesin SMC5/6, which has major roles in chromosome maintenance DNA damage repair. The tegument protein BNRF1 targets SMC5/6 complexes by a ubiquitin proteasome pathway dependent on calpain proteolysis Cullin-7. In absence BNRF1, associates with R-loop structures, including at viral origin replication, interferes RC formation encapsidation. CRISPR identifies restriction components involved entrapment SUMOylation. Our study highlights as an immune sensor factor human herpesvirus implications pathogenesis EBV-associated cancers.

Язык: Английский

Процитировано

52