Cycas
simplicipinna
(T.
Smitinand)
K.
Hill.
(Cycadaceae)
is
an
endangered
species
in
China.
There
were
seven
populations
and
118
individuals
that
we
could
collect
genotyped
this
study.
Here,
assessed
the
genetic
diversity,
structure
demographic
history
of
species.
Analyses
data
DNA
sequences
(two
maternally
inherited
intergenic
spacers
chloroplast,
cpDNA
one
biparentally
internal
transcribed
spacer
region
ITS4-ITS5,
nrDNA)
sixteen
microsatellite
loci
(SSR)
conducted
Of
samples,
86
from
used
for
sequencing
115
six
We
found
high
diversity
at
level,
low
within
each
differentiation
among
populations.
was
a
clear
C.
simplicipinna.
A
inferred
indicates
experienced
recent
population
contraction
without
retreating
to
common
refugium
during
last
glacial
period.
The
results
derived
SSR
also
showed
underwent
past
effective
contraction,
likely
Pleistocene.
Some
features
such
as
having
populations,
provide
guidelines
protecting
extinction.
Furthermore,
with
dynamics
our
study
would
help
insights
other
effectively.
Frontiers in Ecology and Evolution,
Год журнала:
2020,
Номер
8
Опубликована: Май 15, 2020
The
Qinghai-Tibet
Plateau
sensu
lato
(QTP
s.l.)
harbors
an
exceptionally
high
biodiversity,
especially
at
its
southeastern
margin:
this
area
encompasses
the
Hengduan
Mountains
and
eastern
Himalayas,
which
have
been
listed
as
biodiversity
hotspots.
To
contrary,
plateau
interior
(namely
stricto,
QTP
s.s.)
is
relatively
species-poor
because
of
particularly
harsh
climate.
With
contrasting
geological
histories
environmental
conditions
Mountains,
Himalayas
s.s.,
it
would
be
expected
that
floristic
compositions
diversity
patterns
these
three
regions
differ
between
each
other.
compare
regions,
we
assembled
data
on
seed
plant's
distribution
in
based
county-level
mapping
from
published
monographs
online
databases,
then
analyzed
their
features
species
(horizontal
elevational).
We
found
hosted
most
plant
(8,439),
expected.
highest
percentage
shrub
(22.88%)
tree
(9.80%)
were
whereas
herbaceous
(81.50%)
more
prominent
s.s..
also
had
species-rich
genera
(10)
with
than
50%
total
China.
Also,
temperate
dominated
across
a
(77.61%)
within
Across
s.l.,
gradually
decreased
part
to
northwest,
plants
distributed
southern
margin
East
Himalayas.
Along
elevational
gradients,
richness
all
demonstrated
hump-shape
curve,
but
elevation
zone
differed
for
type
life-form
regions.
Our
study
sets
base
exploring
origin
evolution
mountain
taxa,
well
provides
snapshot
current
distribution,
will
certainly
modified
by
climate
change.
Journal of Biogeography,
Год журнала:
2020,
Номер
47(6), С. 1272 - 1285
Опубликована: Фев. 19, 2020
Abstract
Aim
We
explore
the
phylogeography
of
Himalayan
wolves
using
multiple
genetic
markers
applied
on
a
landscape‐scale
dataset
and
relate
our
findings
to
biogeographic
history
region.
Location
Himalayas
Nepal,
Tibetan
Plateau
China
mountain
ranges
Central
Asia.
Taxon
wolf
(also
called
wolf),
Canis
lupus
chanco
.
Methods
present
large‐scale,
non‐invasive
study
from
across
their
estimated
range.
analysed
280
scat
samples
western
China,
Kyrgyzstan
Tajikistan
at
two
mtDNA
loci,
17
microsatellite
four
non‐synonymous
SNPs
in
three
nuclear
genes
related
hypoxia
pathway,
ZF
both
sex
chromosomes.
Results
Our
results
corroborate
previous
studies
showing
that
forms
distinct
lineage
adapted
high
altitudes
excess
4,000
m
elevation.
found
correlation
between
adaptation
divergent
haplotype
Qinghai,
Autonomous
Region
Nepalese
Himalayas.
identified
region
admixture
grey
boundary
distributions,
where
elevation
gradually
drops.
Main
Conclusion
Based
markers,
reciprocally
monophyletic
with
unique
altitude.
propose
divergence
is
past
uplift
region,
maintains
its
high‐altitude
niche,
part,
by
means
hypoxia.
conclude
merits
taxonomic
recognition
designation
as
an
evolutionary
significant
unit
(ESU).
Ecology and Evolution,
Год журнала:
2014,
Номер
4(4), С. 311 - 328
Опубликована: Янв. 10, 2014
We
investigate
the
genetic
variation
between
populations
of
American
sweetgum
(Liquidambar
styraciflua),
a
tree
species
with
disjunct
distribution
northeastern
Texas
and
Mexico,
by
analyzing
sequences
two
chloroplast
DNA
plastid
regions
in
Mesoamerica.
Our
results
revealed
phylogeographical
structure,
private
haplotypes
distributed
unique
environmental
space
at
either
side
Trans-Mexican
Volcanic
Belt,
split
absence
gene
flow
dating
back
ca.
4.2-1.4
million
years
ago
(MYA).
Species
modeling
fit
model
refugia
along
Gulf
Atlantic
coasts
but
present
ranges
US
Mesoamerican
persisted
during
glacial/interglacial
cycles.
Divergence
(ca.
8.4-2.8
MYA)
L.
styraciflua
asymmetrical
patterns
support
hypothesis
long-distance
dispersal
Pliocene,
fragmentation
since
most
recent
glacial
advance
(120,000
BP)
according
to
coalescent
simulations
high
effective
migration
rates
from
Mesoamerica
USA
close
zero
opposite
direction.
findings
implicate
Belt
as
porous
barrier
driving
divergence
styraciflua,
corresponding
niche
differences,
Pliocene
Quaternary
volcanic
arc
episode
3.6
MYA,
origin
USA.
Abstract
Examining
how
historical
and
contemporary
geographic
environmental
factors
contribute
to
genetic
divergence
at
different
evolutionary
scales
is
a
central
yet
largely
unexplored
question
in
ecology
evolution.
Here,
we
examine
this
key
by
investigating
across
epochs
have
driven
deeper
(phylogeographic)
shallower
(landscape
genetic)
the
Chinese
Tertiary
relict
tree
Emmenopterys
henryi
.
We
found
that
geography
played
predominant
role
all
levels
–
phylogeographic
clades
are
broadly
geographically
structured,
deepest
of
associated
with
major
geological
or
pre-Quaternary
climatic
events
isolation
distance
(IBD)
primarily
explained
population
structure.
However,
clearly
also
important
fluctuations
since
Last
Interglacial
(LIG)
likely
contributed
structure
(in
our
AFLP
dataset)
was
partly
environment
(IBE),
which
may
resulted
from
natural
selection
environments
divergent
climates.
Thus,
shaped
patterns
E.
,
and,
fact,
changes
landscape
through
time
been
critical
factors.
Cycas
simplicipinna
(T.
Smitinand)
K.
Hill.
(Cycadaceae)
is
an
endangered
species
in
China.
There
were
seven
populations
and
118
individuals
that
we
could
collect
genotyped
this
study.
Here,
assessed
the
genetic
diversity,
structure
demographic
history
of
species.
Analyses
data
DNA
sequences
(two
maternally
inherited
intergenic
spacers
chloroplast,
cpDNA
one
biparentally
internal
transcribed
spacer
region
ITS4-ITS5,
nrDNA)
sixteen
microsatellite
loci
(SSR)
conducted
Of
samples,
86
from
used
for
sequencing
115
six
We
found
high
diversity
at
level,
low
within
each
differentiation
among
populations.
was
a
clear
C.
simplicipinna.
A
inferred
indicates
experienced
recent
population
contraction
without
retreating
to
common
refugium
during
last
glacial
period.
The
results
derived
SSR
also
showed
underwent
past
effective
contraction,
likely
Pleistocene.
Some
features
such
as
having
populations,
provide
guidelines
protecting
extinction.
Furthermore,
with
dynamics
our
study
would
help
insights
other
effectively.