bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2023,
Номер
unknown
Опубликована: Март 7, 2023
Abstract
Severe
defects
in
cell
size
are
a
nearly
universal
feature
of
cancer
cells.
However,
the
underlying
causes
unknown.
A
previous
study
suggested
that
hyperactive
mutant
yeast
Ras
(
ras2
G19V
)
is
analogous
to
human
oncogene
defects,
which
could
provide
clues
how
oncogenes
influence
size.
mechanisms
by
influences
Here,
we
found
inhibits
critical
step
cycle
entry,
an
early
G1
phase
cyclin
induces
transcription
late
cyclins.
Thus,
drives
overexpression
Cln3,
yet
Cln3
fails
induce
normal
cyclins,
leading
delayed
entry
and
increased
cyclins
via
poorly
understood
inactivates
Whi5
transcriptional
repressor.
Previous
studies
relays
signals
protein
kinase
(PKA)
yeast;
however,
appears
expression
novel
PKA-independent
signaling
mechanisms.
Together,
data
define
new
yeast.
Expression
also
strongly
influenced
mammalian
remain
unclear.
Therefore,
further
analysis
lead
discovery
conserved
family
members
control
PLoS Biology,
Год журнала:
2024,
Номер
22(1), С. e3002453 - e3002453
Опубликована: Янв. 5, 2024
To
achieve
a
stable
size
distribution
over
multiple
generations,
proliferating
cells
require
means
of
counteracting
stochastic
noise
in
the
rate
growth,
time
spent
various
phases
cell
cycle,
and
imprecision
placement
plane
division.
In
most
widely
accepted
model,
is
thought
to
be
regulated
at
G1/S
transition,
such
that
smaller
than
critical
pause
end
G1
phase
until
they
have
accumulated
mass
predetermined
threshold,
which
point
proceed
through
rest
cycle.
However,
based
solely
on
specific
checkpoint
G1/S,
cannot
readily
explain
why
with
deficient
control
mechanisms
are
still
able
maintain
very
distribution.
Furthermore,
model
would
not
easily
account
for
variation
during
subsequent
anticipated
G1/S.
address
questions,
we
applied
computationally
enhanced
quantitative
microscopy
(ceQPM)
populations
cultured
human
lines,
enables
highly
accurate
measurement
dry
individual
throughout
From
these
measurements,
evaluated
factors
contribute
maintaining
homeostasis
any
Our
findings
reveal
accurately
maintained,
despite
disruptions
normal
machinery
or
perturbations
growth.
Control
generally
confined
regulation
length.
Instead
imposed
lines
examined,
find
coefficient
(CV)
population
begins
decline
well
before
transition
continues
S
G2
phases.
Among
different
types
tested,
detailed
response
growth
differs.
general,
when
it
falls
below
exponential
natural
increase
CV
effectively
constrained.
We
both
mass-dependent
cycle
modulation
reducing
within
population.
Through
interplay
coordination
2
processes,
emerges.
Such
previously
unappreciated
general
principles
cells.
These
same
regulatory
processes
might
also
operative
terminally
differentiated
Further
dynamical
studies
should
lead
better
understanding
underlying
molecular
control.
Physiological Reviews,
Год журнала:
2024,
Номер
104(4), С. 1679 - 1717
Опубликована: Июнь 20, 2024
Depending
on
cell
type,
environmental
inputs,
and
disease,
the
cells
in
human
body
can
have
widely
different
sizes.
In
recent
years,
it
has
become
clear
that
size
is
a
major
regulator
of
function.
However,
we
are
only
beginning
to
understand
how
optimization
function
determines
given
cell’s
optimal
size.
Here,
review
currently
known
control
strategies
eukaryotic
intricate
link
intracellular
biomolecular
scaling,
organelle
homeostasis,
cycle
progression.
We
detail
size-dependent
regulation
early
development
impact
differentiation.
Given
importance
for
normal
cellular
physiology,
must
account
changing
conditions.
describe
sense
stimuli,
such
as
nutrient
availability,
accordingly
adapt
their
by
regulating
growth
Moreover,
discuss
correlation
pathological
states
with
misregulation
long
time
this
was
considered
downstream
consequence
dysfunction.
newer
studies
reveal
reversed
causality,
misregulated
leading
pathophysiological
phenotypes
senescence
aging.
summary,
highlight
important
roles
dysfunction,
which
could
implications
both
diagnostics
treatment
clinic.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Апрель 11, 2024
Cell
growth
and
division
must
be
coordinated
to
maintain
a
stable
cell
size,
but
how
this
coordination
is
implemented
in
multicellular
tissues
remains
unclear.
In
unicellular
eukaryotes,
autonomous
size
control
mechanisms
couple
with
little
extracellular
input.
However,
we
do
not
know
if
operate
the
same
way
or
whether
cycle
progression
are
separately
controlled
by
cell-extrinsic
signals.
Here,
address
question
tracking
single
epidermal
stem
cells
growing
adult
mice.
We
find
that
cell-autonomous
mechanism,
dependent
on
RB
pathway,
sets
timing
of
S
phase
entry
based
cell's
current
size.
Cell-extrinsic
variations
cellular
microenvironment
affect
rates
coupling.
Our
work
reassesses
long-standing
models
regulation
within
complex
metazoan
identifies
as
critical
mechanism
regulating
divisions
Along
with
differences
in
life
histories,
metazoans
have
also
evolved
vast
cellularity,
involving
changes
the
molecular
pathways
controlling
cell
cycle.
The
extent
to
which
signalling
network
systemically
determines
cellular
composition
throughout
body
and
whether
tissue
cellularity
is
organized
locally
match
tissue-specific
functions
are
unclear.
We
cultured
genetic
lines
of
Drosophila
melanogaster
on
food
without
rapamycin
manipulate
activity
target
(TOR)/insulin
evaluate
cell-size
five
types
adult
cells:
wing
leg
epidermal
cells,
ommatidial
indirect
flight
muscle
cells
Malpighian
tubule
epithelial
cells.
Rapamycin
blocks
TOR
multiprotein
complex
1,
reducing
growth,
but
this
effect
has
been
studied
single
types.
As
adults,
rapamycin-treated
flies
had
smaller
bodies
consistently
all
tissues.
Regardless,
females
eclosed
larger
tissues
than
males.
Thus,
sex
were
associated
orchestration
size
body,
leading
size.
postulate
that
TOR/insulin
their
effects
should
be
considered
when
investigating
origin
ecological
evolutionary
patterns
histories.
International Journal of Molecular Sciences,
Год журнала:
2024,
Номер
25(2), С. 884 - 884
Опубликована: Янв. 10, 2024
This
brief
review
explores
the
role
of
intracellular
K+
during
transition
cells
from
quiescence
to
proliferation
and
induction
apoptosis.
We
focus
on
relationship
between
growth
rates
different
cells,
including
transformed
in
culture
as
well
human
quiescent
T
mesenchymal
stem
analyze
concomitant
changes
water
content
both
proliferating
apoptotic
cells.
Evidence
is
discussed
indicating
that
initiation
cell
apoptosis
occur
parallel
with
therefore
do
not
lead
significant
concentration.
conclude
K+,
a
dominant
ion,
involved
regulation
volume
transit
quiescence,
dividing
higher
than
or
differentiated
which
can
be
considered
hallmark
transformation.
Royal Society Open Science,
Год журнала:
2023,
Номер
10(6)
Опубликована: Июнь 1, 2023
The
intrinsic
sources
of
mortality
relate
to
the
ability
meet
metabolic
demands
tissue
maintenance
and
repair,
ultimately
shaping
ageing
patterns.
Anti-ageing
mechanisms
compete
for
resources
with
other
functions,
including
those
involved
in
maintaining
functional
plasma
membranes.
Consequently,
organisms
smaller
cells
more
membranes
should
devote
membrane
maintenance,
leading
accelerated
ageing.
To
investigate
this
unexplored
trade-off,
we
reared
Drosophila
melanogaster
larvae
on
food
or
without
rapamycin
(a
TOR
pathway
inhibitor)
produce
small-
large-celled
adult
flies,
respectively,
measured
their
rates.
Males
showed
higher
than
females.
As
expected,
small-celled
flies
(rapamycin)
counterparts
(control),
but
only
early
adulthood.
Contrary
predictions,
median
lifespan
was
similar
between
groups.
Rapamycin
administered
adults
prolongs
life;
thus,
known
direct
physiological
effects
cannot
explain
our
results.
Instead,
invoke
indirect
rapamycin,
manifested
as
reduced
cell
size,
a
driver
increased
mortality.
We
conclude
that
size
differences
associated
burdens
costs
may
be
important
overlooked
factors
influencing
patterns
nature.
bioRxiv (Cold Spring Harbor Laboratory),
Год журнала:
2024,
Номер
unknown
Опубликована: Май 28, 2024
High
dimensional
mass
cytometry
is
confounded
by
unwanted
covariance
due
to
variations
in
cell
size
and
staining
efficiency,
making
analysis
interpretation
challenging.
We
present
RUCova,
a
novel
method
designed
address
confounding
factors
data.
RUCova
removes
using
multivariate
linear
regression
on
Surrogates
of
Unwanted
Covariance
(SUCs),
Principal
Component
Analysis
(PCA).
exemplify
the
use
show
that
it
effectively
while
preserving
genuine
biological
signals.
Our
results
demonstrate
efficacy
elucidating
complex
data
patterns,
facilitating
identification
activated
signalling
pathways,
improving
classification
important
populations.
By
providing
robust
framework
for
normalization
interpretation,
enhances
accuracy
reliability
analyses,
contributing
advancements
our
understanding
cellular
biology
disease
mechanisms.
The
R
package
available
https://github.com/molsysbio/RUCova
.
Detailed
documentation,
data,
code
required
reproduce
are
https://doi.org/10.5281/zenodo.10913464
Supplementary
material:
Available
at
bioRxiv.
Pyruvate
occupies
a
central
node
in
carbohydrate
metabolism
such
that
how
it
is
produced
and
consumed
can
optimize
cell
for
energy
production
or
biosynthetic
capacity.
This
has
been
primarily
studied
proliferating
cells,
but
observations
from
the
post-mitotic
Drosophila
fat
body
led
us
to
hypothesize
pyruvate
fate
might
dictate
rapid
growth
observed
this
organ
during
development.
Indeed,
we
demonstrate
augmented
mitochondrial
import
prevented
cells
vivo
as
well
cultured
mammalian
hepatocytes
human
hepatocyte-derived
vitro
.
effect
on
size
was
caused
by
an
increase
NADH/NAD
+
ratio,
which
rewired
toward
gluconeogenesis
suppressed
biomass-supporting
glycolytic
pathway.
Amino
acid
synthesis
decreased,
resulting
loss
of
protein
growth.
Surprisingly,
all
occurred
face
activated
pro-growth
signaling
pathways,
including
mTORC1,
Myc,
PI3K/Akt.
These
highlight
evolutionarily
conserved
role
setting
balance
between
extraction
biomass
specialized
cells.
Journal of Insect Physiology,
Год журнала:
2023,
Номер
150, С. 104559 - 104559
Опубликована: Авг. 26, 2023
Spatio-temporal
gradients
in
thermal
and
oxygen
conditions
trigger
evolutionary
developmental
responses
ectotherms'
body
size
cell
size,
which
are
commonly
interpreted
as
adaptive.
However,
the
evidence
for
cell-size
is
fragmentary,
typically
assessed
single
tissues.
In
a
laboratory
experiment,
we
raised
genotypes
of
Drosophila
melanogaster
at
all
combinations
two
temperatures
(16
°C
or
25
°C)
levels
(10%
22%)
measured
sizes
cells
different
For
each
sex,
epidermal
wing
leg
ommatidial
an
eye.
males,
also
epithelial
Malpighian
tubule
muscle
flight
muscle.
On
average,
females
emerged
larger
than
did
having
Flies
either
sex
smaller
when
under
warm
hypoxic
conditions.
Development
resulted
most
hypoxia
some
tissues,
especially
among
females.
Altogether,
our
results
show
shifts
adult
coupled
with
systemic
orchestration
throughout
fly.
The
nature
these
patterns
supports
model
ectotherm
adjusts
its
life-history
traits
cellular
composition
to
prevent
severe
level.
revealed
inconsistencies
linked
type,
environmental
parameters,
suggest
caution
translating
information
obtained
type
organism
whole.