Xanthine oxidase-lactoperoxidase system: Dose-dependent antibacterial effects and global gene expression changes in infant oral microbiota DOI Creative Commons

Ida Schnack Eg Gadegaard,

Mathias Helmer Eskildsen,

Stine Karstenskov Østergaard

et al.

Food Research International, Journal Year: 2024, Volume and Issue: 201, P. 115596 - 115596

Published: Dec. 30, 2024

Language: Английский

Characterization of bioaerosol exposures in wastewater treatment plant workers and serum levels of lung and inflammatory markers DOI Creative Commons
Signe Agnete Møller, Margit W. Frederiksen, Pil U. Rasmussen

et al.

Journal of Hazardous Materials, Journal Year: 2025, Volume and Issue: 487, P. 137254 - 137254

Published: Jan. 16, 2025

Language: Английский

Citations

1
Dynamics of nitrogen-transforming microbial populations in wastewater treatment during recirculation of hydrothermal liquefaction process-water. DOI
Patrick Skov Schacksen, Williane Vieira Macêdo, Sandeep Rellegadla

et al.

Water Research, Journal Year: 2025, Volume and Issue: unknown, P. 123254 - 123254

Published: Feb. 1, 2025

Language: Английский

Citations

0
Pike: OTU-Level Analysis for Oxford Nanopore Amplicon Metagenomics DOI Open Access
Danil V. Krivonos, Dmitry E. Fedorov, Dmitry N. Konanov

et al.

International Journal of Molecular Sciences, Journal Year: 2025, Volume and Issue: 26(9), P. 4168 - 4168

Published: April 28, 2025

The Oxford Nanopore platform and nanopore sequencing are gaining increasing popularity in modern metagenomic research. However, there is a limited set of dedicated tools for analyzing this type data. used amplicon data analysis often provide only taxonomy annotation without OTU sequence assembly. Conversely, that facilitate assembly constrained their to long reads, such as the V1-V9 regions 16S rRNA bacterial community studies or full-length ITS cluster (ITS1-5.8S-ITS2) fungal studies. In other cases, researchers propose own solutions tools. paper, we present Pike, novel tool Pike allows size limitations de novo sequences. our research, created mock communities fungi bacteria, which then demonstrate efficiency algorithm. Furthermore, validated algorithm using externally available We also compared approach with similar ones show its applicability.

Language: Английский

Citations

0
Modulating the gut microbiota in Crohn’s disease: a pilot study on the impact of a plant-based diet with DNA-based monitoring DOI Creative Commons

Stine Karstenskov Østergaard,

Zeynep Çetin,

Henrik Højgaard Rasmussen

et al.

Frontiers in Nutrition, Journal Year: 2024, Volume and Issue: 11

Published: Oct. 31, 2024

Crohn's Disease (CD) is characterized by chronic intestinal inflammation and dysbiosis. This study aimed to investigate the effects of a plant-based diet (PBD) on gut microbiota composition in CD patients assess utility

Language: Английский

Citations

0
Xanthine oxidase-lactoperoxidase system: Dose-dependent antibacterial effects and global gene expression changes in infant oral microbiota DOI Creative Commons

Ida Schnack Eg Gadegaard,

Mathias Helmer Eskildsen,

Stine Karstenskov Østergaard

et al.

Food Research International, Journal Year: 2024, Volume and Issue: 201, P. 115596 - 115596

Published: Dec. 30, 2024

Language: Английский

Citations

0