Red-Emitting Pyrrolyl Squaraine Molecular Rotor Reports Variations of Plasma Membrane and Vesicular Viscosity in Fluorescence Lifetime Imaging DOI
Sonia Pfister, Julie Lesieur,

Pierre Bourdoncle

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: 96(31), P. 12784 - 12793

Published: July 27, 2024

The viscosity that ensures the controlled diffusion of biomolecules in cells is a crucial biophysical parameter. Consequently, fluorescent probes capable reporting variations are valuable tools bioimaging. In this field, red-shifted essential, as widely used and gold standard probe remains green-emitting molecular rotors based on BODIPY. Here, we demonstrate pyrrolyl squaraines, red-emissive fluorophores, exhibit high sensitivity over wide range from 30 to 4890 mPa·s. Upon alkylation pyrrole moieties, improve their through an enhanced twisted intramolecular charge transfer phenomenon. We utilized scaffold develop plasma membrane probe, pSQ-PM, efficiently stains fluorogenic manner. Using fluorescence lifetime imaging, pSQ-PM enabled efficient sensing under various conditions different cell lines (HeLa, U2OS, NIH/3T3). Moreover, upon incubation, stained intracellular vesicles suggested lysosomal membranes displayed fluidity.

Language: Английский

Exploration of Novel Meso-C═N-BODIPY-Based AIE Fluorescent Rotors with Large Stokes Shifts for Organelle-Viscosity Imaging DOI

Qing-Hui Wan,

Gulziba Anwar,

Yuxin Tang

et al.

Analytical Chemistry, Journal Year: 2024, Volume and Issue: 96(14), P. 5437 - 5445

Published: March 26, 2024

The research on fluorescent rotors for viscosity has attracted extensive interest to better comprehend the close relationships of microviscosity variations with related diseases. Although scientists have made great efforts, probes cellular both aggregation-induced emissions (AIEs) and large Stokes shifts improve sensing properties rarely been reported. Herein, we first report four new meso-C═N-substituted BODIPY-based shifts, investigate their viscosity/AIE characteristics, perform imaging in subcellular organelles. Interestingly, meso-C═N-phenyl group-substituted probe 6 showed an obvious 594 nm fluorescence enhancement glycerol a moderate 650 red AIE emission water. Further, attaching CF3 phenyl group, similar phenomenon was observed 7 red-shifted emissions, attributed introduction which plays key role shifts. Comparatively, phenyl-group-free probes, meso-C═N-trifluoroethyl group thiazole-substituted (8 9) exhibited good viscosity-responsive properties, while no due absence groups. For experiments, 9 lysosomal mitochondrial targeting respectively, were further successfully used through preincubation monensin lipopolysaccharide (LPS), indicating that C═N polar groups potentially work as rotatable moieties organelle-targeting groups, difference might be ascribed increased charges thiazole. Therefore, this study, investigated structural meso-C═N respect subcellular-targeting ability, viscosity, serving imaging.

Language: Английский

Citations

8

Thioflavin T─a Reporter of Microviscosity in Protein Aggregation Process: The Study Case of α-Synuclein DOI Creative Commons
Konstantin Rusakov, Aadil El-Turabi, Lasse Reimer

et al.

The Journal of Physical Chemistry Letters, Journal Year: 2024, Volume and Issue: 15(25), P. 6685 - 6690

Published: June 20, 2024

Thioflavin T (ThT) informed microviscosity changes can be used to monitor protein aggregation. Steady-state, time-resolved and lasing spectroscopy were detect transient states in α-synuclein - a associated with Parkinson's disease. The major focus was on the nucleation phase, where conventional ThT fluorescence assay lacks appropriate sensitivity early stage oligomers. Instead, threshold parameters, particular, sensitive detecting Through spectroscopy, change correlating stages of aggregation observed at two wavelengths 405 440 nm. are free dye molecules β-sheet bound molecules. This provides perspective elucidating formed aggregation, critical aspect understanding pathogenesis neurodegenerative diseases. insights from presented study shows potential using as tool studying dynamics.

Language: Английский

Citations

5

Construction of cationic meso-thiazolium-BODIPY AIE fluorescent probes for viscosity imaging in dual organelles DOI
Yuxin Tang,

Yingmei Cao,

Wen‐Jing Shi

et al.

Chemical Communications, Journal Year: 2024, Volume and Issue: 60(67), P. 8864 - 8867

Published: Jan. 1, 2024

Two new cationic

Language: Английский

Citations

3

Locally-Activated Chemogenetic pH Probes for Monitoring Protein Exocytosis DOI Creative Commons

Justine Coïs,

Marie-laure Niepon,

Manon Wittwer

et al.

Published: April 12, 2024

Genetically encoded biosensors based on fluorescent proteins are valuable tools for imaging biological processes with high selectivity. In particular, pH-sensitive such as the GFP-derived superecliptic pHluorin (SEP) or pHuji allow tracking of protein trafficking through acidic and neutral compartments. Recently, chemogenetic indicators combining synthetic fluorophores genetically self-labeling tags (SLP-tag) offer a versatile alternative that combines diversity chemical probes selectivity genetic-encoding. Here, we describe novel fluorogenic pH sensor consisting cell-permeable molecular indicator called pHluo-Halo-1 whose fluorescence can be locally activated in cells by reaction SLP-tag HaloTag ensuring signal wash-free experiments. pHluo-Halo display good sensitivity suitable pKa 5.9 to monitor variations. This hybrid probe was applied follow exocytosis CD63-HaloTag fusion enabling visualization exosomes released from vesicles into extracellular media using TIRF microscopy. platform is expected powerful tool elucidating dynamics regulatory mechanisms living cells.

Language: Английский

Citations

2

Photodynamic therapy with Photoditazine increases microviscosity of cancer cells membrane in cellulo and in vivo DOI
Liubov E. Shimolina,

Aleksandra E. Khlynova,

Aleksander A. Gulin

et al.

Journal of Photochemistry and Photobiology B Biology, Journal Year: 2024, Volume and Issue: 259, P. 113007 - 113007

Published: Aug. 8, 2024

Language: Английский

Citations

2

Locally-Activated Chemogenetic pH Probes for Monitoring Protein Exocytosis DOI Creative Commons

Justine Coïs,

Marie-laure Niepon,

Manon Wittwer

et al.

Published: April 8, 2024

Genetically encoded biosensors based on fluorescent proteins are valuable tools for imaging biological processes with high selectivity. In particular, pH-sensitive such as the GFP-derived superecliptic pHluorin (SEP) or pHuji allow tracking of protein trafficking through acidic and neutral compartments. Recently, chemogenetic indicators combining synthetic fluorophores genetically self-labeling tags (SLP-tag) offer a versatile alternative that combines diversity chemical probes selectivity genetic-encoding. Here, we describe novel fluorogenic pH sensor consisting cell-permeable molecular indicator called pHluo-Halo-1 whose fluorescence can be locally activated in cells by reaction SLP-tag HaloTag ensuring signal wash-free experiments. pHluo-Halo display good sensitivity suitable pKa 5.9 to monitor variations. This hybrid probe was applied follow exocytosis CD63-HaloTag fusion enabling visualization exosomes released from vesicles into extracellular media using TIRF microscopy. platform is expected powerful tool elucidating dynamics regulatory mechanisms living cells.

Language: Английский

Citations

1

Fluorescent Membrane Probes Obey the Israelachvili Rules DOI Creative Commons

Felix Bayard,

Stefan Matile

Helvetica Chimica Acta, Journal Year: 2024, Volume and Issue: 107(7)

Published: May 9, 2024

Abstract When developing fluorescent membrane probes, we naturally tend to focus on the fluorophore itself. In this study, show that sometimes it can be beneficial shift attention from center periphery, maximize multiple interfacing with complex changing environments. Palmitylation for hydrophobic and glutamate dendrons hydrophilic are combined improve performance of flipper probes. We increase in membranes, solubility water is important, water, hydrophobicity probe. These seemingly paradoxical measures taken satisfy Israelachvili rules. They state only inverted cone amphiphiles form soluble micelles while shaped precipitate into hexagonal 1 supramolecular polymers, intermediate cylindrical behavior dominated by bilayers lamellar precipitates. The normal obtained prevent precipitation prepare efficient transfer lipid bilayer membranes. results flippers break all records set 2016 original regard effective brightness, responsiveness order, anchoring disordered partitioning membranes high stable labeling interest. lessons learned confirm obvious: rules apply also promise literally bright perspectives

Language: Английский

Citations

1

Fast Recombination of Free Radicals in Solution and Microviscosity DOI Creative Commons
I. V. Khudyakov

Physchem, Journal Year: 2024, Volume and Issue: 4(2), P. 157 - 166

Published: May 27, 2024

Rates of fast reactions are inversely proportional to the solvent viscosity (η). However, a quantitative study demonstrates that dynamic η is often crude reflection viscous drug exerted on molecule or radical. This paper aims present an accurate dependence rates bi- and monomolecular upon media. Different correction coefficients fmicro discussed, which should lead rate ∝ (fmicroη)−1. Microviscosity viscosity, leading expected shear viscosity. In many cases, experimentally measured diffusion molecules similar structure reactive radicals correct prediction radicals’ constants recombination. complex non-Newtonian liquids (biological liquids, polymeric solutions) can be using low MW molecular probes. Usually, ηmicro much lower than biological liquids. Cis–trans isomerization bulky groups in described with Kramers’ theory. An example such cyanine dye studied theoretically presented. It demonstrated selected case theory adequately describes cis–trans organic compounds η.

Language: Английский

Citations

0

Using Graph Neural Networks to Predict Positions of the Absorption Maxima of a Number of Dyes DOI
Mikhail M. Lukanov, Alexander A. Ksenofontov

Russian Journal of Physical Chemistry A, Journal Year: 2024, Volume and Issue: 98(14), P. 3342 - 3346

Published: Dec. 1, 2024

Language: Английский

Citations

0

Determining intracellular protein physical microenvironment using fluorescence lifetime imaging microscopy DOI
Xiao Yu, Baoxing Shen,

He Huang

et al.

Trends in Biochemical Sciences, Journal Year: 2024, Volume and Issue: 49(6), P. 557 - 558

Published: May 9, 2024

Language: Английский

Citations

0