Decoding Chemotherapy Resistance of Undifferentiated Pleomorphic Sarcoma at the Single Cell Resolution: A Case Report DOI Open Access
Timur I. Fetisov, Maxim E. Menyailo, Alexander V. Ikonnikov

et al.

Journal of Clinical Medicine, Journal Year: 2024, Volume and Issue: 13(23), P. 7176 - 7176

Published: Nov. 26, 2024

Undifferentiated pleomorphic sarcoma (UPS) is a highly malignant mesenchymal tumor that ranks as one of the most common types soft tissue sarcoma. Even though chemotherapy increases 5-year survival rate in UPS, high heterogeneity frequently leads to resistance and consequently recurrences. In this study, we characterized cell composition transcriptional profile UPS with at single resolution.

Language: Английский

USP26 suppresses type I interferon signaling by targeting TRAF3 for deubiquitination DOI Creative Commons

Cheng-Lan Sheng,

Bang-Dong Jiang,

Chunqiu Zhang

et al.

PLoS ONE, Journal Year: 2024, Volume and Issue: 19(7), P. e0307776 - e0307776

Published: July 26, 2024

Deubiquitinating enzymes (DUBs) play a pivotal role in regulating the antiviral immune response by targeting members of RLR signaling pathway. As member pathway, TRAF3 is essential for activating MAVS/TBK-1/IRF3 pathway to viral infection. Despite its importance, function DUBs TRAF3-mediated poorly understood. Ubiquitin-specific protease 26 (USP26) regulates modulate response. The results demonstrate that EV71 infection upregulates expression USP26. Knockdown USP26 significantly enhances EV71-induced IFN-β and downstream interferon-stimulated genes (ISGs). Deficiency not only inhibits replication but also weakens host's resistance physically interacts with reduces K63-linked polyubiquitination TRAF3, thereby promoting pIRF3-mediated signaling. Conversely, knockdown leads an increase TRAF3. These findings unequivocally establish contribute understanding deubiquitination-mediated regulation innate responses.

Language: Английский

Citations

0

Peptidomic analysis reveals novel peptide PDLC promotes cell proliferation in hepatocellular carcinoma via Ras/Raf/MEK/ERK pathway DOI Creative Commons
Bo Han,

Daqing Cheng,

Huizhao Luo

et al.

Scientific Reports, Journal Year: 2024, Volume and Issue: 14(1)

Published: Aug. 13, 2024

Hepatocellular carcinoma (HCC) still presents poor prognosis with low overall survival rates and limited therapeutic options available. Recently, attention has been drawn to peptidomic analysis, an emerging field of proteomics for the exploration new potential peptide drugs treatment various diseases. However, research on function HCC peptides is lacking. Here, we analyzed spectrum in tissues using techniques explored potentially beneficial involved HCC. Changes profiles were examined liquid chromatography-mass spectrometry (LC–MS/MS). Analyze physicochemical properties differently expressed bioinformatics. The effect candidate functional cell growth migration was evaluated CCK-8, colony formation, transwell assays. Transcriptome sequencing analysis western blot employed delve into mode action Peptidomic tissue yielded a total 8683 peptides, which 452 exhibited up-regulation 362 showed down-regulation. that differentially expressed, according bioinformatic closely linked carbon metabolism mitochondrial inner membrane. validation identified novel peptide, PDLC (peptide derived from liver cancer), found dramatically boost proliferation through Ras/Raf/MEK/ERK signaling cascade. Our defined peptide's pattern expression PDLC, encouraging progression, offering entirely target disease.

Language: Английский

Citations

0

Unveiling the Mechanism of Compound Ku-Shen Injection in Liver Cancer Treatment through an Ingredient–Target Network Analysis DOI Open Access

Wenkui Zou,

Jiazhen Liu,

Zexing Wei

et al.

Genes, Journal Year: 2024, Volume and Issue: 15(10), P. 1278 - 1278

Published: Sept. 29, 2024

Compound Ku-Shen Injection (CKI) is a traditional Chinese medicine preparation derived from and Bai-Tu-Ling, commonly used in the adjunctive treatment of advanced cancers, including liver cancer. However, underlying mechanisms CKI's effectiveness cancer are not well defined.

Language: Английский

Citations

0

Integrative transcriptome analysis reveals Serpine2 promotes glomerular mesangial cell proliferation and extracellular matrix accumulation via activating ERK1/2 signalling pathway in diabetic nephropathy DOI
Ting Zheng,

Ruhao Yang,

Xin Li

et al.

Diabetes Obesity and Metabolism, Journal Year: 2024, Volume and Issue: 27(2), P. 750 - 766

Published: Nov. 18, 2024

Abstract Background Diabetic nephropathy (DN) is one of the main causes end‐stage renal disease (ESRD), but its mechanism has not been clearly studied. We utilized integrative transcriptome analysis to explore pathogenesis DN. Methods conducted an by combining bulk dataset and single‐cell dataset. Through this approach, we identified that Serpine2 may regulate ‘collagen‐containing extracellular matrix’ pathway involved in Subsequently, established DN animal cell models using db/db mice mesangial cells (MCs) validate role In model, detected expression level western blotting (WB) immunofluorescence (IF) assays. To further clarify molecular DN, knocked down observed effects on MCs proliferation matrix (ECM) accumulation. Results Our highlighted a pivotal for disease's initiation. Next, through Cytoscape differentially expressed genes (DEGs) MCs, following 10 hub genes: Acta2, Angpt2, Ccn1, Col4a1, Col4a2, Col8a1, Kdr, Thbs1, Tpm4 Serpine2. Kdr were also significantly DEGs glomeruli. Additionally, our integrated gene set enrichment RNA revealed was key progression. crucial regulating pathway. Therefore, speculated regulation important mechanism. Importantly, WB IF staining confirmed upregulated diabetic mice. Knockdown cultured alleviated high‐glucose‐induced excessive ECM Finally, found ERK agonist Ro 67‐7476 eliminated effect siRNA. Conclusions summary, regulates synthesis activation ERK1/2 pathway, which These findings offer fresh perspectives mechanisms glomerulosclerosis provide new targets treating

Language: Английский

Citations

0

Decoding Chemotherapy Resistance of Undifferentiated Pleomorphic Sarcoma at the Single Cell Resolution: A Case Report DOI Open Access
Timur I. Fetisov, Maxim E. Menyailo, Alexander V. Ikonnikov

et al.

Journal of Clinical Medicine, Journal Year: 2024, Volume and Issue: 13(23), P. 7176 - 7176

Published: Nov. 26, 2024

Undifferentiated pleomorphic sarcoma (UPS) is a highly malignant mesenchymal tumor that ranks as one of the most common types soft tissue sarcoma. Even though chemotherapy increases 5-year survival rate in UPS, high heterogeneity frequently leads to resistance and consequently recurrences. In this study, we characterized cell composition transcriptional profile UPS with at single resolution.

Language: Английский

Citations

0