arXiv (Cornell University),
Journal Year:
2021,
Volume and Issue:
unknown
Published: Jan. 11, 2021
The
use
of
Shiny
in
research
publications
is
investigated.
From
the
appearance
this
popular
web
application
framework
for
R
through
to
2018,
it
has
been
utilised
many
diverse
areas.
While
can
be
shown
that
complexity
applications
limited
by
background
architecture,
and
real
security
concerns
exist
novice
app
developers,
collaborative
benefits
are
worth
attention
from
wider
community.
simplifies
complex
methodologies
users
different
specialities,
at
level
proficiency
appropriate
end
user.
This
enables
a
community
interact
efficiently,
utilising
cutting-edge
methodologies.
literature
reviewed
demonstrates
put
into
practice
without
necessity
investment
professional
training.
It
would
appear
opens
up
concurrent
communication
between
those
who
analyse
data
other
disciplines,
thereby
potentially
enriching
technology.
Journal of Experimental Biology,
Journal Year:
2020,
Volume and Issue:
unknown
Published: Jan. 1, 2020
Climatic
warming
is
predicted
to
increase
the
frequency
of
extreme
weather
events,
which
may
reduce
an
individual's
capacity
for
sustained
activity
because
thermal
limits.
We
tested
whether
risk
overheating
limit
parental
provisioning
aerial
insectivorous
bird
in
population
decline.
For
many
seasonally
breeding
birds,
parents
are
thought
operate
close
energetic
ceiling
during
2-3
week
chick-rearing
period.
The
factors
determining
remain
unknown,
although
it
be
set
by
dissipate
body
heat
(the
dissipation
limitation
hypothesis).
Over
two
seasons
we
experimentally
trimmed
ventral
feathers
female
tree
swallows
(Tachycineta
bicolor)
provide
a
window.
then
monitored
maternal
and
paternal
rates,
nestling
growth
rates
fledging
success.
found
effect
our
experimental
treatment
was
context
dependent.
Females
with
enhanced
fed
their
nestlings
at
higher
than
controls
when
conditions
were
hot,
but
reverse
true
under
cool
conditions.
Control
females
mates
both
reduced
foraging
hot
In
contrast,
male
partners
maintained
constant
feeding
rate
across
temperatures,
suggesting
attempts
match
partners.
On
average,
heavier
controls,
did
not
have
probability
fledging.
suggest
that
removal
constraint
allowed
additionally
provided
advantage
via
increased
transfer
brooding.
Our
data
support
hypothesis
depending
on
temperature,
can
influence
reproductive
success
insectivores.
Journal of Experimental Biology,
Journal Year:
2024,
Volume and Issue:
227(13)
Published: June 10, 2024
Scholander-Irving
curves
describe
the
relationship
between
ambient
temperature
and
metabolic
rate
are
fundamental
to
understanding
energetic
demands
of
homeothermy.
However,
typically
measured
in
dry
air,
which
is
not
representative
humidity
many
organisms
experience
nature.
Consequently,
it
unclear
(1)
whether
(especially
below
thermoneutrality)
altered
by
humidity,
given
effects
on
thermal
properties
(2)
physiological
responses
associated
with
lab
reflect
organismal
performance
humid
field
conditions.
We
used
laboratory
experiments
biophysical
models
test
thermoregulatory
physiology
tree
swallows
(Tachycineta
bicolor).
also
tested
under
conditions
were
correlated
body
temperatures
nestling
provisioning
rates.
found
that
reduced
rates
evaporative
water
loss
but
did
have
large
or
rate,
suggesting
can
decouple
cooling,
rate.
Although
effect
was
small,
our
indicated
costs
thermoregulation
∼8%
greater
simulations
from
birds
compared
Finally,
we
mixed
evidence
nest
field.
Our
results
help
clarify
endotherm
thermoregulation,
may
forecast
environmental
change.
Ringing & Migration,
Journal Year:
2019,
Volume and Issue:
34(1), P. 25 - 32
Published: Jan. 2, 2019
Radio-frequency
identification
(RFID)
is
an
increasingly
popular
wireless
technology
that
allows
researchers
to
monitor
wild
bird
populations
from
fixed
locations
in
the
field.
I
have
developed
RFID-equipped
birdfeeder
based
on
Raspberry
Pi
Zero
W,
a
low-cost
single-board
computer,
collects
continuous
visitation
data
birds
marked
with
passive
integrated
transponder
(PIT)
tags.
Each
has
perch
antenna
connected
RFID-reader
board
powered
by
portable
battery.
When
tagged
lands
eat
feeder,
its
unique
code
stored
date
and
time
Pi.
These
birdfeeders
require
only
basic
soldering
coding
skills
assemble,
can
easily
be
outfitted
additional
hardware
like
video
cameras
microphones.
outline
process
of
assembling
setting
up
operating
system
for
birdfeeders.
Then,
describe
example
implementation
track
House
Finches
Haemorhous
mexicanus
campus
Queens
College
New
York
City.
Ecology and Evolution,
Journal Year:
2017,
Volume and Issue:
7(19), P. 7884 - 7896
Published: Aug. 30, 2017
Abstract
Radio
frequency
identification
(
RFID
)
provides
a
simple
and
inexpensive
approach
for
examining
the
movements
of
tagged
animals,
which
can
provide
information
on
species
behavior
ecology,
such
as
habitat/resource
use
social
interactions.
In
addition,
tracking
animal
is
appealing
to
naturalists,
citizen
scientists,
general
public
thus
represents
tool
engagement
in
science
education.
Although
useful
tool,
large
amount
data
collected
using
may
quickly
become
overwhelming.
Here,
we
present
an
R
package
feedr
have
developed
loading,
transforming,
visualizing
time‐stamped,
georeferenced
data,
from
static
logger
stations.
Using
our
package,
be
transformed
raw
visits,
presence
(regular
detections
by
over
time),
between
loggers,
displacements,
activity
patterns.
several
conversion
functions
allow
users
format
other
complementary
packages.
Data
also
visualized
through
or
interactive
maps
animations
time.
To
increase
accessibility,
either
directly,
companion
site:
http://animalnexus.ca
,
online,
user‐friendly,
R‐based
Shiny
Web
application.
This
system
used
professional
scientists
alike
view
study
movements.
We
designed
this
flexible
able
handle
stationary
sources
(e.g.,
hair
traps,
very
high
VHF
telemetry
observations
marked
individuals
colonies
staging
sites),
hope
framework
will
meeting
point
science,
education,
community
awareness
animals.
aim
inspire
while
simultaneously
enabling
robust
scientific
analysis.
Behavioral Ecology,
Journal Year:
2021,
Volume and Issue:
32(4), P. 747 - 755
Published: Feb. 9, 2021
Abstract
Anthropogenic
noise
is
a
ubiquitous
feature
of
the
American
landscape,
and
known
stressor
for
many
bird
species,
leading
to
negative
effects
in
behavior,
physiology,
reproduction,
ultimately
fitness.
While
number
studies
have
examined
how
anthropogenic
affects
avian
fitness,
there
are
few
that
simultaneously
examine
impacts
relationship
between
parental
care
behavior
nestling
We
conducted
Brownian
playbacks
6
h
day
during
nesting
cycle
on
Eastern
Bluebird
(Sialia
sialis)
nest
boxes
investigate
if
experimentally
elevated
affected
body
conditions,
stress
indices.
documented
attendance
by
adult
females
using
radio
frequency
identification
(RFID),
we
assessed
measuring
baseline
corticosterone
levels
telomere
lengths.
Based
RFID
data
collected
individual
brood
cycles,
bluebirds
exposed
had
significantly
higher
feeding
rates
earlier
than
adults
control
group,
but
reduced
later
cycle.
Nestlings
conditions
nestlings
at
11
days
age,
equalized
treatments
14.
found
no
differences
or
lengths
two
treatment
groups.
Our
results
revealed
altered
which
corresponded
with
condition.
However,
absence
indicators
longer-term
offspring
suggests
may
been
short-term
response.
Conservation Biology,
Journal Year:
2019,
Volume and Issue:
33(6), P. 1448 - 1450
Published: March 4, 2019
Please
note:
The
publisher
is
not
responsible
for
the
content
or
functionality
of
any
supporting
information
supplied
by
authors.
Any
queries
(other
than
missing
content)
should
be
directed
to
corresponding
author
article.
Ornithology,
Journal Year:
2018,
Volume and Issue:
135(3), P. 449 - 460
Published: April 18, 2018
Gaps
in
forest
habitat
are
well
documented
to
negatively
impact
the
movements
of
songbirds.
Much
past
research
on
avian
gap-crossing
decisions
has
utilized
playback
experiments.
However,
playbacks
limited
by
short
observation
times
and
often
cannot
be
used
reveal
differences
behaviors
among
individuals.
Here,
we
present
a
novel
approach
utilizing
radio-frequency
identification
(RFID)
investigate
Black-capped
Chickadees
(Poecile
atricapillus).
Using
bird
feeders
outfitted
with
RFID
readers,
were
able
track
movement
patterns
wintering
within
forests
across
gaps.
We
logistic
regression
an
information
theoretic
identify
factors
that
best
predicted
behaviors.
impeded
predictors
gap
size
vegetation
density.
Birds
more
likely
make
crossings
decreasing
when
gaps
contained
matrix
(1–2
m
height).
recommend
primary
way
increase
connectivity
for
birds
fragmented
habitats
is
reduce
distances.
Additionally,
it
may
beneficial
shrubby
or
woody
height
over
1
m,
as
this
also
increases
likelihood
gap-crossing.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2019,
Volume and Issue:
unknown
Published: July 22, 2019
Abstract
Climatic
warming
will
likely
increase
the
frequency
of
extreme
weather
events,
which
may
reduce
an
individual’s
capacity
for
sustained
activity
due
to
thermal
limits.
We
tested
whether
risk
overheating
limit
parental
provisioning
aerial
insectivorous
bird
in
population
decline.
For
many
seasonally
breeding
birds,
parents
are
thought
operate
close
energetic
ceiling
during
2-3
week
chick-rearing
period.
The
factors
determining
remain
unknown,
although
it
be
set
by
dissipate
body
heat
(the
dissipation
limitation
hypothesis).
To
test
this
hypothesis,
over
two
seasons
we
experimentally
trimmed
ventral
feathers
female
tree
swallows
(
Tachycineta
bicolor
)
provide
a
window.
then
monitored
maternal
rates,
nestling
growth
and
fledging
success.
found
effect
our
experimental
treatment
was
context-dependent
varied
with
environmental
conditions.
Females
plumage
fed
their
nestlings
at
higher
rates
than
controls
when
conditions
were
hot
non-windy,
but
reverse
true
under
cool
windy
On
average,
females
heavier
controls,
had
probability
fledging.
suggest
that
removal
constraint
allowed
additionally
provided
advantage
via
increased
transfer
brooding.
Our
data
partial
support
depending
on
patterns,
can
influence
reproductive
success
insectivores.
I
present
a
novel
approach
utilizing
radio
frequency
identification
(RFID)
birdfeeders,
coupled
with
playback
experiments,
to
investigate
the
gap-crossing
decisions
of
black-capped
chickadees
(Poecile
atricapillus).
Results
from
my
RFID
experiments
revealed
that
best
predictors
behaviors
were
gap-distance,
and
vegetation
density.
Birds
less
likely
cross
as
gap
distance
increased.
As
amount
within
gaps
increased,
birds
more
cross.
Playback
showed
decrease
in
behaviour
after
sampling
period.
Because
birdfeeders
put
out
during
this
time,
decreases
propensity
suggests
may
be
engaging
tradeoff
between
energy
reserves
risk
taking.
both
confirm
do
restrict
movements
wintering
chickadees.
recommend
primary
way
increase
connectivity
for
fragmented
habitats
is
reduce
across
gaps.
Furthermore,
increasing
also
connectivity.