Shotgun metagenomics reveals the flexibility and diversity of Arctic marine microbiomes
ISME Communications,
Journal Year:
2025,
Volume and Issue:
5(1)
Published: Jan. 1, 2025
Abstract
Polar
oceanographic
regions
are
exposed
to
rapid
changes
in
temperature,
salinity,
and
light
fields
that
determine
microbial
species
distributions,
but
resilience
an
increasingly
unstable
climate
is
unknown.
To
unravel
genomic
potential
of
the
Northern
Baffin
Bay’s
polynya,
we
constructed
eight
metagenomes
from
same
latitude
targeting
two
sides
Pikialasorsuaq
(The
North
Water)
differ
by
current
systems,
stratification,
temperature
regimes.
Samples
surface
subsurface
chlorophyll
maximum
(SCM)
both
were
collected
13
months
apart.
Details
metabolic
pathways
determined
for
18
bacteria
10
eukaryote
metagenome-assembled
genomes
(MAGs).
The
eukaryotic
MAGs
associated
with
dominant
green
algae
Mamiellales
diatoms
Mediophyceae,
which
tended
respectively
dominate
eastern
western
Pikialasorsuaq.
We
show
community
taxonomic
functional
signatures
ca.
80%
similar
at
sampled
only
20%
genes
local
conditions.
From
found
involved
osmotic
regulation,
antifreeze
proteins,
photosystem
protection,
hydrocarbon
biodegradation
methane
oxidation
detected.
shared
compliment
was
consistent
adaptation
Arctic’s
extreme
fluctuating
conditions,
implications
their
evolutionary
history
long-term
survival
a
pan-arctic
microbiome.
In
particular,
previously
unrecognized
genetic
capabilities
bio-attenuation
metabolism
phytoplankton
suggest
dark
conditions
will
remain,
despite
warming,
high
offshore
waters
future
Arctic.
Language: Английский
Metazoan Diversity and Its Drivers: An eDNA Survey in the Pacific Gateway of a Changing Arctic Ocean
Environmental DNA,
Journal Year:
2025,
Volume and Issue:
7(2)
Published: March 1, 2025
ABSTRACT
Climate
change
drives
species
to
adapt
or
undergo
range
shifts
survive.
The
Arctic
Ocean,
experiencing
more
drastic
environmental
changes
than
any
other
ocean,
has
two
primary
inflow
regions
that
facilitate
these
shifts:
the
wide,
deep
Atlantic
Gateway
and
narrow,
shallow
Pacific
Gateway.
Environmental
DNA
(eDNA)
surveys
have
proven
be
effective
in
characterizing
community
composition
understanding
its
ecological
drivers.
We
conducted
first
COI
marker‐based
eDNA
survey
analyzed
seawater
samples
from
various
geographic
regions,
depths,
water
masses
across
Bering
Strait,
Chukchi
Sea,
South
Beaufort
Sea.
Metazoan
taxa
15
different
phyla
indicator
for
were
identified.
characterized
a
highly
diverse
neritic
fauna
Strait
aligning
with
known
locations
of
benthic
hotspots.
On
slope
we
observed
transitions
copepod‐dominated
epipelagic
waters
cnidarian‐
sponge‐dominated
deeper
areas.
Alpha
diversity
peaked
near
seabed
coastlines
was
highest
within
warmest
Alaskan
Coastal
Water
mass.
linked
metazoan
communities
variables,
being
associated
higher
temperatures
fluorescence,
majority
them
lower
salinities.
This
included
mostly
Pseudocalanus
copepod
verongiid
sponges.
While
rising
might
enhance
alpha
diversity,
anticipate
this
will
primarily
due
influx
warmer
fresher
masses.
Several
taxa,
including
bivalve
Macoma
calcarea
seastar
Leptasterias
arctica
,
as
well
jellyfish
Chrysaora
melanaster
Triconia
borealis
colder,
saltier
likely
negatively
impacted
by
ongoing
change.
Our
study
successfully
rapidly
changing
Ocean.
Language: Английский