Spatiotemporal distributions, co-occurrence networks, and assembly mechanisms of the bacterial community in sediments of the Yangtze River: comprehensive insights into abundant and rare taxa DOI Creative Commons
Guohua Zhang, Shufeng Liu,

Wenran Du

et al.

Frontiers in Microbiology, Journal Year: 2024, Volume and Issue: 15

Published: Dec. 11, 2024

Sediments are key reservoirs for rare bacterial biospheres that provide broad ecological services and resilience in riverine ecosystems. Compared with planktons, there is a lack of knowledge regarding the differences between abundant taxa benthic bacteria along large river. Here, we offer comprehensive insights into spatiotemporal distributions, co-occurrence networks, assembly processes three divided categories namely always (ART), conditionally (CRT), (CRAT) sediments covering distance 4,300 km Yangtze River. Our study demonstrated ART/CRT contributed greatly to higher Chao-1 index, Shannon-Wiener phylogenetic alpha diversity autumn than spring. ART showed high overall beta diversity, CRT/CRAT exhibited more significant distance-decay patterns both seasons, mainly corresponding macroscopic landform types. CRT predominated nonrandom network, 97% keystone species mostly affiliated Acidobacteriota flourishing lower-reach plain. Two selection had greatest influences on (74.7–77.6%), whereas CRAT were driven primarily by dispersal limitation (74.9–86.8%) heterogeneous (33.9–48.5%) undominated stochasticity (32.7–36.5%). Natural factors such as river flow channel slope correlations community variation nutrients all groups, total organic carbon mediated balance among distinct seasons. Taken together, these results an improved understanding discrepancy biogeographic Asia’s largest

Language: Английский

Soil microbial community composition and co-occurrence network responses to mild and severe disturbances in volcanic areas DOI
Jin Chen,

Qingchen Xiao,

Daolong Xu

et al.

The Science of The Total Environment, Journal Year: 2023, Volume and Issue: 901, P. 165889 - 165889

Published: July 29, 2023

Language: Английский

Citations

40

High levels of cadmium altered soil archaeal activity, assembly, and co-occurrence network in volcanic areas DOI
Zihua Zhang, Daolong Xu, T. Huang

et al.

The Science of The Total Environment, Journal Year: 2024, Volume and Issue: 924, P. 171529 - 171529

Published: March 6, 2024

Language: Английский

Citations

10

Effects of Arbuscular Mycorrhizal Fungi (AMF) and Biochar on Cotton Plants: A Comprehensive Study DOI Creative Commons
Emrah Ramazanoğlu, İbrahim Halil Yanardağ, Erdal Sakin

et al.

Journal of soil science and plant nutrition, Journal Year: 2025, Volume and Issue: unknown

Published: April 1, 2025

Language: Английский

Citations

1

Comparison of soil microbial abundances and co-occurrence networks in the volcanic soil of the cone and crater DOI
Zihua Zhang, T. Huang, Manli Zhao

et al.

CATENA, Journal Year: 2023, Volume and Issue: 236, P. 107734 - 107734

Published: Dec. 6, 2023

Language: Английский

Citations

13

Responses of soil microbial diversity, network complexity and multifunctionality to environments changes in volcanic ecosystems DOI
Jin Chen, Daolong Xu,

Qingchen Xiao

et al.

Journal of environmental chemical engineering, Journal Year: 2024, Volume and Issue: 12(5), P. 113334 - 113334

Published: June 14, 2024

Language: Английский

Citations

5

The spatio-temporal accumulation of 6 PPD-Q in greenbelt soils and its effects on soil microbial communities DOI

Wei Wu,

Qiao Xu,

Jinhu Li

et al.

Environmental Pollution, Journal Year: 2024, Volume and Issue: 358, P. 124477 - 124477

Published: June 29, 2024

Language: Английский

Citations

5

Synergistic mechanisms of AMF and biochar driving rhizosphere fungal community in shallot in barren soil DOI Creative Commons
Zishan Li, Yingyue Li, Qing Zhang

et al.

Horticultural Plant Journal, Journal Year: 2024, Volume and Issue: 10(5), P. 1252 - 1256

Published: July 27, 2024

Language: Английский

Citations

4

The assembly process and co-occurrence network of soil microbial community driven by cadmium in volcanic ecosystem DOI Creative Commons

Qingchen Xiao,

Boyan Wang, Zishan Li

et al.

Resources Environment and Sustainability, Journal Year: 2024, Volume and Issue: 17, P. 100164 - 100164

Published: Aug. 8, 2024

Heavy metal (HM) contamination affects the composition and structure of soil microbial communities, but there are few studies on assembly process co-occurrence network community succession driven by Cd in volcanic ecosystem. To address this gap knowledge, we collected analyzed samples from Nvshan Volcanic area to understand characteristics primary (PS) secondary (SS). We found that was contaminated with different levels (PS > SS), resulting obvious heterogeneity microorganisms. The absolute abundance bacteria (16S rRNA gene copies) varied significantly between two successions (P < 0.0001). networks analysis showed number nodes bacterial communities lower PS compared SS (1002 vs. 1004), indicating heavy would reduce communities. Compared PS, exhibited stronger competitiveness (positive: negative, P/N: 25.69 64.22), whereas fungal were closer symbiotic relationships (positive/negative, 15.85 14.29). neutral model (NCM) revealed stochastic processes predominantly governed (bacterial R2: 0.657, 0.686). Mantel test negatively associated cbbLR, amoA, phoD. results Sankey diagram fungi more resistant than (27 13). This study contributes understanding under stress identifying strains potential for remediation.

Language: Английский

Citations

4

Impact of Humidity Variations at Different Distances from the Lake Surface on Rhizosphere Microbiota of Trifolium repens L. DOI
Jin Chen,

Meiling Ping,

Xiaowan Geng

et al.

Physiological and Molecular Plant Pathology, Journal Year: 2025, Volume and Issue: 136, P. 102596 - 102596

Published: Feb. 6, 2025

Language: Английский

Citations

0

Erratic Calcareous Deposits: Biotic Formation Insights and Biomineralising Bacterial Strain Isolation DOI Creative Commons
Beatrice Farda,

Amedeo Mignini,

Rihab Djebaili

et al.

Acta Biomaterialia, Journal Year: 2025, Volume and Issue: unknown

Published: Feb. 1, 2025

Language: Английский

Citations

0