Research Square (Research Square),
Journal Year:
2022,
Volume and Issue:
unknown
Published: May 31, 2022
Abstract
Thermal
tolerance
is
variable
in
corals,
yet
intrinsic
and
extrinsic
drivers
of
are
not
well
understood.
Understanding
the
distribution
abundance
heat
tolerant
corals
across
seascapes
imperative
for
predicting
responses
to
climate
change
support
novel
management
actions.
Rapid
high-throughput
methods
measure
heat-induced
coral
bleaching
sensitivity
increasingly
required
understand
current
predict
future
change.
Experimental
evaluations
typically
involve
ramp-and-hold
experiments
run
days
weeks
within
aquarium
facilities
with
limits
colony
replication.
Field-based
acute
stress
assays
have
emerged
as
an
alternative
experimental
approach
rapidly
quantify
a
large
number
samples
role
key
methodological
considerations
on
response
measured
remains
unresolved.
Here,
we
effects
fragment
size,
sampling
time
point,
physiological
measures
adult
corals.
The
effect
size
differed
between
species
(
Acropora
tenuis
Pocillopora
damicornis
).
Most
parameters
here
declined
over
(tissue
colour,
chlorophyll-a
protein
content)
from
onset
heating,
exception
maximum
photosynthetic
efficiency
F
v
/
m
),
which
was
stable
up
24h
post
heating.
Based
our
experiments,
identified
efficiency,
tissue
colour
change,
host-specific
such
catalase
activity
rapid
quantification
thermal
tolerance.
We
recommend
that
applications
include
larger
fragments
(>9cm
2
)
where
possible
sample
10
-
14h
after
end
stress.
A
validated
combined
cost-effective
genomic
measurements
underpins
development
markers
maps
ocean
warming
scenarios.
Coral Reefs,
Journal Year:
2022,
Volume and Issue:
41(4), P. 1115 - 1130
Published: May 4, 2022
Abstract
Increasing
anthropogenic
pressure
on
coral
reefs
is
creating
an
urgent
need
to
understand
how
and
where
corals
can
proliferate
both
now
under
future
scenarios.
Resolving
environmental
limits
of
has
progressed
through
the
accurate
identification
corals’
‘realised
ecological
niche’.
Here
we
expand
niche
concept
account
for
‘biogeochemical
niche’
(BN),
defined
as
chemical
space
in
which
a
adapted
survive,
identifiable
by
unique
quantity
proportion
elements
(termed
“elementome”).
BN
theory
been
commonly
applied
other
taxa,
successfully
predicting
species
distributions
stress
responses
their
elementomes.
Here,
apply
first
time,
using
dry
combustion
inductively
coupled
plasma–mass
spectrometry
(ICP-MS)
determine
five
key
macronutrients
thirteen
trace
four
diverse
scleractinian
from
Great
Barrier
Reef
(GBR):
Acropora
hyacinthus
;
Echinopora
lamellosa;
Pocillopora
cf.
meandrina;
verrucosa.
The
elementomes
were
investigated
host
Symbiodiniaceae,
latter
had
highest
elemental
concentrations
(except
molybdenum).
Each
associated
with
distinct
members
genus
Cladocopium
(determined
ITS2
analysis)
photo-physiological
data
suggesting
specialisation
functional
biology.
Distinct
endosymbiont
community
structure
functioning
between
different
confirms
that
holds
metabolic
compatibility
alters
across
host–symbiont
associations.
Additional
work
needed
plasticity
elementomes,
turn
BN,
over
time
aid
predictions
distribution
survival
change.
Microorganisms,
Journal Year:
2024,
Volume and Issue:
12(2), P. 317 - 317
Published: Feb. 2, 2024
The
urgency
of
responding
to
climate
change
for
corals
necessitates
the
exploration
innovative
methods
swiftly
enhance
our
understanding
crucial
processes.
In
this
study,
we
employ
an
integrated
chemical
omics
approach,
combining
elementomics,
metabolomics,
and
volatilomics
methodologies
unravel
biochemical
pathways
associated
with
thermal
response
coral
symbiont,
Symbiodiniaceae
Coral Reefs,
Journal Year:
2024,
Volume and Issue:
43(4), P. 919 - 933
Published: June 8, 2024
Abstract
Exposure
to
more
frequent
ocean
warming
events
is
driving
the
loss
of
coral
reef
cover
as
window
recovery
between
episodes
bleaching
reduces.
Coral
propagation
via
in
situ
nurseries
and
subsequent
outplanting
have
increased
worldwide
support
replenishing
on
degraded
reefs.
However,
challenges
identifying
fast-growing
bleaching-resistant
target
corals
limited
how
informative
we
can
be
regarding
resilience
outplanted
corals.
Here,
employed
short-term
thermal
stress
assays
using
Bleaching
Automated
Stress
System
(CBASS)
assess
threshold
a
pre-
post-propagation
nursery
frames.
We
show
that
year-long
nursery-propagated
exhibit
statistically
significant
reduction
thresholds
(i.e.,
ED50s)
compared
their
corresponding
reef-based
donor
colonies
based
dose–response
modelling
dark
acclimated
photosynthetic
efficiency.
RNA-Seq
was
then
used
underlying
drivers
this
thermotolerance
reduction,
processes
involved
metabolic
oxidative
management
were
disrupted
versus
heat-treated
Whether
trade-offs
during
potential
growth-focused
phases
(post-fragmentation),
conditions,
and/or
consecutively
high
summer
heat-load
drove
lower
capacity
remains
determined.
expressed
genes
associated
with
telomere
maintenance,
which
are
typically
stress-sensitive
under
seasonal
environmental
stress,
suggesting
heat-loading
contributed
observed
patterns.
Our
results
highlight
tolerance
(i)
variable
(ii)
subject
acclimation
varying
degrees
across
colonies.
Thus,
path
forward
for
practitioners
improve
efforts
may
entail
initial
screening
larger
population
from
thermally
superior
selected
propagation.
Frontiers in Physiology,
Journal Year:
2023,
Volume and Issue:
14
Published: Oct. 11, 2023
Diversity
across
algal
family
Symbiodiniaceae
contributes
to
the
environmental
resilience
of
certain
coral
species.
Chlorophyll-a
fluorescence
measurements
are
frequently
used
determine
symbiont
health
and
resilience,
but
more
work
is
needed
refine
these
tools
establish
how
they
relate
underlying
cellular
traits.
We
examined
trait
diversity
in
symbionts
from
generas
Cladocopium
Durusdinium,
collected
12
aquacultured
Photophysiological
metrics
(ΦPSII,
σPSII,
ρ,
τ1,
τ2,
antenna
bed
quenching,
non-photochemical
qP)
were
assessed
using
a
prototype
multi-spectral
fluorometer
over
variable
light
protocol
which
yielded
total
1,360
individual
metrics.
then
four
unique
light-response
phenotypic
variants.
Corals
harboring
C15
predominantly
found
within
single
phenotype
clustered
separately
all
other
fragments.
The
majority
Durusdinium
dominated
colonies
also
formed
separate
it
shared
with
few
C1
corals.
D1
appear
differ
mechanisms
use
dissipate
excess
energy.
Spectrally
dependent
variability
observed
phenotypes
that
may
differences
photopigment
utilization.
Symbiont
cell
biochemical
structural
traits
(atomic
C:N:P,
size,
chlorophyll-a,
neutral
lipid
content)
was
each
sample
phenotypes,
linking
photophysiological
primary
Strong
correlations
between
first-
second-order
traits,
such
as
Quantum
Yield
N:P
content,
or
dissipation
pathways
(qP
NPQ)
C:P
underline
types
provide
means
for
fluorescence-based
biomarkers
primary-cellular
Metabolomics,
Journal Year:
2024,
Volume and Issue:
20(4)
Published: June 17, 2024
The
coral
holobiont
is
underpinned
by
complex
metabolic
exchanges
between
different
symbiotic
partners,
which
are
impacted
environmental
stressors.
chemical
diversity
of
the
compounds
produced
high
and
includes
primary
secondary
metabolites,
as
well
volatiles.
However,
metabolites
volatiles
have
only
been
characterised
in
isolation
so
far.
Here,
we
applied
a
paired
metabolomic-volatilomic
approach
to
characterise
holistically
response
under
stress.
Montipora
mollis
fragments
were
subjected
high-light
stress
(8-fold
higher
than
controls)
for
30
min.
Photosystem
II
(PSII)
photochemical
efficiency
values
7-fold
control
versus
treatment
corals
immediately
following
exposure,
but
returned
pre-stress
levels
after
min
recovery.
Under
stress,
identified
an
increase
carbohydrates
(>
5-fold
arabinose
fructose)
saturated
fatty
acids
(7-fold
myristic
oleic
acid),
together
with
decrease
acid
derivatives
both
(e.g.,
80%
oleamide
nonanal),
other
antioxidants
(~
85%
sorbitol
galactitol).
These
changes
suggest
short-term
light
induces
oxidative
Correlation
analysis
positive
links
sorbitol,
galactitol,
six
11
volatiles,
four
these
previously
antioxidants.
This
suggests
that
19
may
be
related
share
similar
functions.
Taken
together,
our
findings
demonstrate
how
metabolomics-volatilomics
illuminate
broader
shifts
occurring
identify
linkages
uncharacterised
putatively
determine
their
Scientific Reports,
Journal Year:
2024,
Volume and Issue:
14(1)
Published: Sept. 18, 2024
Organismal
phenotyping
to
identify
fitness
traits
is
transforming
our
understanding
of
adaptive
responses
and
ecological
interactions
species
within
changing
environments.
Here
we
present
a
portable
Multi-Taxa
Phenotyping
(MTP)
system
that
can
retrieve
suite
metabolic
photophysiological
parameter
across
light,
temperature,
and/or
chemical
gradients,
using
real
time
bio-optical
(oxygen
chlorophyll
fluorescence)
measurements.
The
MTP
integrates
three
well-established
technologies
for
the
first
time:
an
imaging
Pulse
Amplitude
Modulated
(PAM)
fluorometer,
custom-designed
well
plates
equipped
with
optical
oxygen
sensors,
thermocycler.
We
demonstrate
ability
distinguish
phenotypic
performance
characteristics
diverse
aquatic
taxa
spanning
corals,
mangroves
algae
based
on
parameters
Photosystem
II
dynamics,
in
high-throughput
capacity
accounting
different
environmental
gradients
performance.
Extracted
metrics
from
not
only
provide
information
exposed
differing
but
also
predicted
key
organisms
change.
Further
work
validating
how
rapid
tools
such
as
predict
long
term
changes
situ
are
urgently
required
best
inform
these
support
management
efforts.
Frontiers in Marine Science,
Journal Year:
2022,
Volume and Issue:
9
Published: July 22, 2022
Symbiodiniaceae
live
in
endosymbiosis
with
corals.
In
the
last
few
decades,
mass
bleaching
events
have
occurred
coral
reefs,
causing
damage
ecosystem
and
associated
species.
Global
temperature
increase
is
affecting
algae,
disturbing
whole
symbiosis
leads
to
bleaching.
However,
heat
tolerance
strongly
determined
by
species
(formerly
genetic
clades)
harbored
host.
We
assessed
three
different
strains
of
family,
i.e.,
Fugacium
kawagutii
(CS156),
Symbiodinium
tridacnidorum
(2465),
microadriaticum
(2467),
which
display
under
stress
conditions.
Flash-induced
chlorophyll
fluorescence
relaxation
a
useful
tool
monitor
various
components
photosynthetic
electron
transport
chain
redox
reactions
plastoquinone
pool.
observed
appearance
wave
phenomenon
heating
combination
microaerobic
The
characteristics
this
were
found
be
strain-specific
possibly
related
transient
oxidation
re-reduction
appears
cyclic
flow
as
well
because
it
accompanied
enhanced
post-illumination
rise.
These
results
will
potentially
reveal
further
details
role
its
relevance
tolerance.
<p><b>With
a
rapidly
changing
environment,
understanding
the
endosymbiotic
relationship
between
cnidarians
and
dinoflagellates
is
crucial
to
elucidate
ways
in
which
corals
may
respond
future
conditions.
At
basis
of
this
symbiosis
exchange
metabolites
signalling
molecules
partners,
all
contribute
establishment,
maintenance,
ultimately
dissociation
important
relationship.
A
subset
metabolites,
biogenic
volatile
organic
compounds
(BVOCs)
are
low
molecular
weight,
weakly
lipophilic
that
diffuse
quickly
through
water
air,
making
them
potential
candidates
for
inter-species
interactions.
This
thesis
sought
characterise
patterns
BVOC
generation
cnidarian-dinoflagellate
across
symbiotic
states
thermal
dysfunction
model
cnidarian
Aiptasia
(Exaiptasia
diaphana).
</b></p>
<p>In
Chapter
2,
I
characterised
suite
BVOCs
(collectively,
‘volatilome’)
emitted
by
system
symbiosis,
each
partner
isolation.
Relative
anemones,
volatilome
cultured
symbionts
(Breviolum
minutum)
was
more
distinct
than
it
aposymbiotic
(symbiont-free)
suggesting
alters
physiological
state
dinoflagellate
dramatically
Aiptasia.
For
example,
B.
minutum
produced
dimethyl
sulphide
(DMS)
highest
abundance,
while
anemones
halogenated
methanes
like
bromochloromethane,
bromodichloromethane,
tribromomethane
trichloromethane,
regardless
state.
Alternatively,
relative
lack
alteration
host,
state,
suggest
high
degree
metabolic
integration
partners.
</p>
3,
examined
role
symbiont
identity
on
microbiome
Microbiome
analysis
revealed
populations
bacteria
with
family
Vibrionaceae
being
most
abundant
anemones.
As
prominent
members
bacterial
pathogens,
higher
proportion
could
indicate
disease
susceptibility
volatilomes
those
native
minutum,
non-native
Durusdinium
trenchii
indistinct
from
either
aposymbiosis
or
minutum.
suggests
presence
known
form
sub-optimal
potentially
stressful
impacts
metabolome.
Indeed,
isoprene
containing
abundance
aldehydes
octanal,
nonanal
dodecanal,
these
as
biomarkers.</p>
4,
investigated
impact
stress
its
Aposymbiotic
were
exposed
control
(25
°C),
sub-bleaching
(30
°C)
bleaching
(33.5
temperatures.
In
both
observed
restructuring
25
°C
33.5
°C,
at
30
exhibiting
an
intermediate
consistent
previous
experiments
showing
microbiota
can
shift
response
environmental
Anemones
number
significantly
different
BVOCs,
including
acetone
naphthalene.
contrast,
temperature
lower
treatments,
largely
driven
quantities
sulphide,
eucalyptol
1-iodododecane.
Overall,
exhibited
decline
richness
progressively
temperatures,
perhaps
revealing
onset
collapse;
decrease
not
temperature,
stabilising
effect
endosymbionts.
5,
describe
method
assess
chemotactic
responses
Symbiodiniaceae,
defined
tryptone
positive
Cladocopium
spp.,
D.
trenchii.
assessed
spp.
pervasive
marine
metabolite
dimethylsulphoniopropionate
(DMSP),
volatiles
bromodichloromethane
(BrCl2CH)
diiodomethane
(I2CH2).
Despite
their
production
neither
BrCl2CH
nor
I2CH2
elicited
sp.
The
precursor
(DMS),
multifunctional
widespread
DMSP
has
functions
osmoregulation,
antioxidant
defence
acts
chemoattractant
multiple
organisms.
found
that,
repelled
DMSP,
did
chemotactically
molecule.
These
differing
species
Symbiodiniaceae
reflect
chemical
cues
used
locate
establish
new
hosts,
adds
literature
describing
functional
diversity
<p>Collectively,
my
elucidates
synthesis
release
stress.
foundational
study
provides
platform
explore
roles
identified
associates.
Additionally,
non-invasive
technology
volatilomics
applied
here
serve
identify
biomarkers
ecosystem
health
natural
habitats.
Ultimately,
work
contributes
our
altered
time
when
coral
reefs
threatened
extinction.</p>
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: July 7, 2023
Abstract
Diversity
across
algal
family
Symbiodiniaceae
contributes
to
the
environmental
resilience
of
certain
coral
species.
Chlorophyll-
a
fluorescence
measurements
are
frequently
used
determine
symbiont
health
and
resilience,
but
more
work
is
needed
refine
these
tools
establish
how
they
relate
underlying
cellular
traits.
We
examined
trait
diversity
in
symbionts
from
generas
Cladocopium
Durusdinium,
collected
12
aquacultured
Photophysiological
metrics
(Φ
PSII
,
σ
ρ,
τ
1
2
ABQ,
NPQ,
qP)
were
assessed
using
prototype
multi-spectral
fluorometer
over
variable
light
protocol
which
yielded
total
1360
individual
metrics.
then
four
unique
phenotypic
variants.
Corals
harboring
C15
predominantly
found
within
single
phenotype
clustered
separately
all
other
fragments.
The
majority
Durusdinium
dominated
colonies
also
formed
separate
it
shared
with
few
C1
corals.
D1
appear
differ
mechanisms
employ
dissipate
excess
energy.
Spectrally
dependent
variability
observed
phenotypes
that
may
differences
photopigment
utilization.
Cell
physiology
(atomic
C:N:P,
cell
size,
chlorophyll-
neutral
lipid
content)
was
each
sample
phenotypes,
linking
photophysiological
primary
Strong
correlations
between
first–
second-order
traits,
such
as
Quantum
Yield
N:P
content,
or
dissipation
pathways
(qP
NPQ)
C:P
underline
types
provide
means
for
fluorescence-based
biomarkers
primary-cellular