Synthetic Light‐Driven Consortia for Carbon‐Negative Biosynthesis DOI
Chao-Feng Li, Haotian Zheng,

Hengrun Li

et al.

ChemBioChem, Journal Year: 2023, Volume and Issue: 24(17)

Published: July 4, 2023

Synthetic light-driven consortia composed of phototrophs and heterotrophs have attracted increasing attention owing to their potential be used in sustainable biotechnology. In recent years, synthetic phototrophic been produce bulk chemicals, biofuels, other valuable bioproducts. addition, autotrophic-heterotrophic symbiosis systems applications wastewater treatment, bioremediation, as a method for phytoplankton bloom control. Here, we discuss progress made on the biosynthesis microbial consortia. strategies optimizing are summarized. Moreover, highlight current challenges future research directions development robust controllable

Language: Английский

Anaerobic biodegradation of polycyclic aromatic hydrocarbons DOI
Chao Chen, Zhan Zhang, Ping Xu

et al.

Environmental Research, Journal Year: 2023, Volume and Issue: 223, P. 115472 - 115472

Published: Feb. 10, 2023

Language: Английский

Citations

26

Non‐gene‐editing microbiome engineering of spontaneous food fermentation microbiota—Limitation control, design control, and integration DOI

Liangqiang Chen,

Guozheng Wang,

Mengjing Teng

et al.

Comprehensive Reviews in Food Science and Food Safety, Journal Year: 2023, Volume and Issue: 22(3), P. 1902 - 1932

Published: March 7, 2023

Non-gene-editing microbiome engineering (NgeME) is the rational design and control of natural microbial consortia to perform desired functions. Traditional NgeME approaches use selected environmental variables force Spontaneous food fermentation, oldest kind traditional NgeME, transforms foods into various fermented products using networks. In spontaneous fermentation microbiotas (SFFMs) are typically formed controlled manually by establishment limiting factors in small batches with little mechanization. However, limitation generally leads trade-offs between efficiency quality fermentation. Modern based on synthetic ecology have been developed designed communities explore assembly mechanisms target functional enhancement SFFMs. This has greatly improved our understanding microbiota control, but such still shortcomings compared NgeME. Here, we comprehensively describe research strategies for SFFMs modern We discuss ecological principles two enhance how best SFFM. also review recent applied theoretical propose an integrated vitro model bridge gaps

Language: Английский

Citations

24

Exploring Cereal Metagenomics: Unravelling Microbial Communities for Improved Food Security DOI Creative Commons
Kedibone Masenya, Madira Coutlyne Manganyi, Tshegofatso Bridget Dikobe

et al.

Microorganisms, Journal Year: 2024, Volume and Issue: 12(3), P. 510 - 510

Published: March 2, 2024

Food security is an urgent global challenge, with cereals playing a crucial role in meeting the nutritional requirements of populations worldwide. In recent years, field metagenomics has emerged as powerful tool for studying microbial communities associated cereal crops and their impact on plant health growth. This chapter aims to provide comprehensive overview its enhancing food through exploration beneficial pathogenic interactions. Furthermore, we will examine how integration other tools can effectively address adverse effects security. For this purpose, discuss metagenomic data machine learning providing novel insights into dynamic interactions shaping plant-microbe relationships. We also shed light potential applications leveraging diversity epigenetic modifications improving crop resilience yield sustainability. Ultimately, revolutionized by harnessing between microbiota, paving way sustainable agricultural practices.

Language: Английский

Citations

12

Enhanced AHL-mediated quorum sensing accelerates the start-up of biofilm reactors by elevating the fitness of fast-growing bacteria in sludge and biofilm communities DOI

Fuzhong Xiong,

Tianjiao Dai, Yuhan Zheng

et al.

Water Research, Journal Year: 2024, Volume and Issue: 257, P. 121697 - 121697

Published: April 30, 2024

Language: Английский

Citations

12

Groundbreaking Technologies and the Biocontrol of Fungal Vascular Plant Pathogens DOI Creative Commons
Carmen Gómez‐Lama Cabanás, Jesús Mercado‐Blanco

Journal of Fungi, Journal Year: 2025, Volume and Issue: 11(1), P. 77 - 77

Published: Jan. 18, 2025

This review delves into innovative technologies to improve the control of vascular fungal plant pathogens. It also briefly summarizes traditional biocontrol approaches manage them, addressing their limitations and emphasizing need develop more sustainable precise solutions. Powerful tools such as next-generation sequencing, meta-omics, microbiome engineering allow for targeted manipulation microbial communities enhance pathogen suppression. Microbiome-based include design synthetic consortia transplant entire or customized soil/plant microbiomes, potentially offering resilient adaptable strategies. Nanotechnology has advanced significantly, providing methods delivery biological agents (BCAs) compounds derived from them through different nanoparticles (NPs), including bacteriogenic, mycogenic, phytogenic, phycogenic, debris-derived ones acting carriers. The use biodegradable polymeric non-polymeric eco-friendly NPs, which enable controlled release antifungal while minimizing environmental impact, is explored. Furthermore, artificial intelligence machine learning can revolutionize crop protection early disease detection, prediction outbreaks, precision in BCA treatments. Other genome editing, RNA interference (RNAi), functional peptides efficacy against pathogenic fungi. Altogether, these provide a comprehensive framework management diseases, redefining modern agriculture.

Language: Английский

Citations

1

Guided by the principles of microbiome engineering: Accomplishments and perspectives for environmental use DOI
Haiyang Hu, Miaoxiao Wang,

Yiqun Huang

et al.

mLife, Journal Year: 2022, Volume and Issue: 1(4), P. 382 - 398

Published: Nov. 3, 2022

Although the accomplishments of microbiome engineering highlight its significance for targeted manipulation microbial communities, knowledge and technical gaps still limit applications in biotechnology, especially environmental use. Addressing challenges refractory pollutants fluctuating conditions requires an adequate understanding theoretical achievements practical engineering. Here, we review recent cutting-edge studies on strategies their classical bioremediation. Moreover, a framework is summarized combining both top-down bottom-up approaches toward improved applications. A strategy to engineer microbiomes use, which avoids build-up toxic intermediates that pose risk human health, suggested. We anticipate highlighted will be beneficial address difficult such as degrading multiple sustain performance engineered situ with indigenous microorganisms under conditions.

Language: Английский

Citations

33

Starting with screening strains to construct synthetic microbial communities (SynComs) for traditional food fermentation DOI
Xinyi Jiang, Zheng Peng, Juan Zhang

et al.

Food Research International, Journal Year: 2024, Volume and Issue: 190, P. 114557 - 114557

Published: May 27, 2024

Language: Английский

Citations

8

A systematic discussion and comparison of the construction methods of synthetic microbial community DOI Creative Commons
Chenglong Li, Yanfeng Han,

Xiao Zou

et al.

Synthetic and Systems Biotechnology, Journal Year: 2024, Volume and Issue: 9(4), P. 775 - 783

Published: June 20, 2024

Synthetic microbial community has widely concerned in the fields of agriculture, food and environment over past few years. However, there is little consensus on method to synthetic from construction functional verification. Here, we review concept, characteristics, history applications community, summarizing several methods for construction, such as isolation culture, core microbiome mining, automated design, gene editing. In addition, also systematically summarized design concepts, technological thresholds, applicable scenarios various methods, highlighted their advantages limitations. Ultimately, this provides four efficient, detailed, easy-to-understand -follow steps with major implications agricultural practices, production, environmental governance.

Language: Английский

Citations

7

The trade-off between individual metabolic specialization and versatility determines the metabolic efficiency of microbial communities DOI Creative Commons
Miaoxiao Wang, Xiaoli Chen, Yuan Fang

et al.

Cell Systems, Journal Year: 2024, Volume and Issue: 15(1), P. 63 - 74.e5

Published: Jan. 1, 2024

Language: Английский

Citations

6

Application of cold-adapted microbial agents in soil contaminate remediation: biodegradation mechanisms, case studies, and safety assessments DOI Creative Commons
Jiaxin Li, Yujuan Wen, Zheng Fang

et al.

RSC Advances, Journal Year: 2024, Volume and Issue: 14(18), P. 12720 - 12734

Published: Jan. 1, 2024

Analyzed the microorganisms cold-adapted mechanism, and summarized degradation pathway of nitro-aromatic compounds. Evaluated safety microbial agents according to existing application restoration cases under freeze-thaw cycles condition.

Language: Английский

Citations

4