The Plant Genome special section: Grain quality and nutritional genomics for breeding next‐generation crops DOI Creative Commons
Manish K. Pandey, Reyazul Rouf Mir, Nese Sreenivasulu

et al.

The Plant Genome, Journal Year: 2023, Volume and Issue: 16(4)

Published: Dec. 1, 2023

By 2050, the world's population is expected to reach 9.8 billion according United Nations predictions (https://www.un.org/en/desa/world-population-projected-reach-98-billion-2050-and-112-billion-2100). As a result, crop yields must roughly double in order feed an expanding global while still satisfying consumer demands for grain quality and nutrition. In addition enhancing nutritional value of food crops, making available affordable, nutrient-dense food, especially those who are economically disadvantaged, will be central pillar address security. The strategy improving traits breeding programs has been prioritized with recent advancements phenotyping seeds grains (metabolomics, mineral vitamins, assessing starch, proteins lipids, capturing preferred traits), sequencing technologies do high-throughput genotyping, functional genomics aided gene discovery, high-resolution trait mapping superior haplotype as well deploying genomic selection tools variety crops (Pandey et al., 2016; Varshney 2019). To improve dietary patterns, new generation foods ingredients improved intrinsic attributes needs generated through advanced methods. This help public health by increasing density optimizing complex carbohydrates, proteins, lipids. utilizing integrating both modern traditional techniques, it possible hasten production types yield, grain, quality. special issue highlights most significant findings, which cover developments genomics, including prediction related quality, enhancement nutritive cereals (rice, wheat, maize, oat) legume like groundnut. Overall, this includes collection studies deciphering genetic mechanisms micronutrients covering minerals such iron (Fe), zinc (Zn), vitamin enrichment (tocochromanols), pigmented bioactives, amino acids, fiber, fatty acid composition, safety, end user selected legumes. approach identifying regions controlling key nutrition successful contributed significantly marker discovery use (Cockram & Mackay, 2018). High concentrations essential lysine limiting high free asparagine prevent acrylamide during bread formation enhance wheat grain. article Oddy al. (2023) used understanding control composition UK soft major emphasis on lowering higher content. multivariate analysis showing these largely independent one another, largest effect acids being from environment. study also identified quantitative loci (QTLs) content, may prove useful applying appropriate strategies reduce programmes. Using same groundnut, Parmar co-localized main candidate genes content Zn reports identification six main-effect QTLs Fe five Interestingly, three that further facilitate fine diagnostic development pooled sequencing-based region biparental Gangurde (2022) QTL-Seq markers seed weight. successfully associated weight 182 SNPs genic intergenic regions. Although multiple important regions, Ulp proteases BIG SEED locus very because its detection other well. More importantly breed groundnut varieties bigger size, gene-specific Kompetitive allele-specific PCR were developed validated. It vital determine Meta-QTLs haplotypes target traits, numerous found several areas form influence Joshi addresses aspect paper biofortification rice performing meta-analysis 155 followed 57 MQTLs reduced confidence intervals. importantly, not only detected co-localization metal homeostasis but involvement network silico expression co-expression analyses. Furthermore, efficient biofortification. Another led Diers presented results architecture concentration protein, oil, meal protein using soybean nested association reported 107 marker-trait associations (MTAs) above-mentioned traits. few MTAs mapped within 5 cM intervals (94%) effects matched correlation between linked suggested would more effective large number small Derbyshire utilized pangenome based thousands lines identify alleles involved biosynthesis. instances missing wild soybean, FAD8 FAD2-2D oleic linoleic desaturation, respectively. frequency missense biosynthesis genes, could domestication. genome-wide (GWAS) alternate plant species rely variation various core collections, instead developing populations (Gangurde 2022; Sushmitha 2023). Panahabadi uses monosaccharides contents rice. Monosaccharides building blocks synthesis polymers or carbohydrates. 49 housed 17 located seven chromosomes whole all novel. Multiple promising potential validation breeding. next Mbanjo performs GWAS linking pigmentation seed. >280 SNPs, many than secondary metabolite accumulation pigmentation. Further, targeted 67 52 showed 24 Rc/bHLH17 OsIPT5 regulation wide range phenolic compounds color. information made exploited deployment rice-breeding program. Genomic emerged powerful prediction-based progenies crop-breeding even early generation, therefore, saving resources, time, precision added advantage. There plenty testing statistical models maize wheat. now, huge training size constitution, genotyping platforms, keeping mind genotype interaction environment soil, possibilities selection. case published emerging area Research Tibbs-Cortes provided exciting exotic-derived tocochromanols (vitamin E), human diet. expected, accuracies achieved when predicting each decreased performed diversity panel set. strength hypothesis optimal designing efficiently incorporate exotic germplasm into Tanaka worked sound data support prior QTL contributing causal conferring biological knowledge elevate E improves multi-trait model two panels inbred lines. Next, research Brzozowski was oat targeting methods 12 indicated variability accuracy family compared unrelated panel. families had half-sib set without it, suggesting approach. Meher tested eight Bayesian micro-nutrient Zn, Fe, β-carotenoid ridge regression reliable method revalidated reliability increases increase BLUE values response variables better Fradgeley summarized maintenance Bread Baking Quality trends over 50 years future application genomic-assisted no subsequent net loss gain due breeders’ selection, despite yield time. proposed reduction increased gluten combination changes industrial baking process enabled decades. Most diverse varied algorithm clarity best models, can realistic scenarios Gill implementing processing end-use hard winter (MTGP) outperformed single up twofold accuracy. suggests MTGP together flour sedimentation evaluated earlier generations predict generations. issue, review articles focusing nutrients plants Khan another allergens (2023). under changing environments role stressful biotechnological optimization nutrient acquisition, transport, distribution plants. provides bio-fortification optimize stress conditions emphasizes about concerns safety need protect negative food-born allergies. current updates predicts prospects allergen-depleted crops. discussed detail how advances molecular breeding, engineering, genome editing potentially health. Manish K. Pandey: Conceptualization; investigation; methodology; project administration; resources; supervision; writing—original draft; writing—review editing. Reyazul Rouf Mir: Nese Sreenivasulu:

Language: Английский

Designing future peanut: the power of genomics-assisted breeding DOI
Ali Raza, Hua Chen, Chong Zhang

et al.

Theoretical and Applied Genetics, Journal Year: 2024, Volume and Issue: 137(3)

Published: March 1, 2024

Language: Английский

Citations

9
Legume Allergens Pea, Chickpea, Lentil, Lupine and Beyond DOI Creative Commons
Marua Abu Risha, Eva‐Maria Rick,

Melanie Plum

et al.

Current Allergy and Asthma Reports, Journal Year: 2024, Volume and Issue: 24(9), P. 527 - 548

Published: July 11, 2024

In the last decade, an increasing trend towards a supposedly healthier vegan diet could be observed. However, recently, more cases of allergic reactions to plants and plant-based products such as meat-substitution products, which are often prepared with legumes, were reported. Here, we provide current knowledge on legume allergen sources respective single allergens. We answer question legumes beside well-known food peanut soybean should considered for diagnostic therapeutic measures.

Language: Английский

Citations

8
Genome Editing Technologies to Improve Health‐Related Phytocompounds in Crops DOI Creative Commons
Maria Dellino, Claudio De Giovanni, Monica Marilena Miazzi

et al.

Food Frontiers, Journal Year: 2025, Volume and Issue: unknown

Published: March 12, 2025

ABSTRACT Due to rapid global population growth and the resulting significant increase in food demand, world is facing an epidemic of malnutrition. Although yield improvement remains one main targets breeding programs, much attention being paid nutritional aspects crops, including nutrients bioactive compounds that are often important for general human health disease prevention. Phytocompounds such as allergens, antinutrients, antioxidants, vitamins, fatty acids among most classes chemical substances affect thus contribute value crops. Conventional these traits consists laborious time‐consuming methods, but recent advances new genome editing (GE) technologies offer a valuable, time‐saving, cost‐effective alternative. The article reports on extensive use GE tools modify content health‐relevant bio‐compounds obtain crops with higher quality.

Language: Английский

Citations

0
Implementing RNA Interference to Boost Plant Resistance and Enhance Crop Characteristics: A Review DOI

Nour M. Elbana,

Khalil M. Saad‐Allah

Plant Molecular Biology Reporter, Journal Year: 2024, Volume and Issue: unknown

Published: Nov. 15, 2024

Language: Английский

Citations

1
Characteristic features of food allergy to legumes: From epidemiology to prevention DOI
Maria Zofia Lisiecka

Human Immunology, Journal Year: 2024, Volume and Issue: 85(6), P. 111179 - 111179

Published: Nov. 1, 2024

Language: Английский

Citations

0
The Plant Genome special section: Grain quality and nutritional genomics for breeding next‐generation crops DOI Creative Commons
Manish K. Pandey, Reyazul Rouf Mir, Nese Sreenivasulu

et al.

The Plant Genome, Journal Year: 2023, Volume and Issue: 16(4)

Published: Dec. 1, 2023

By 2050, the world's population is expected to reach 9.8 billion according United Nations predictions (https://www.un.org/en/desa/world-population-projected-reach-98-billion-2050-and-112-billion-2100). As a result, crop yields must roughly double in order feed an expanding global while still satisfying consumer demands for grain quality and nutrition. In addition enhancing nutritional value of food crops, making available affordable, nutrient-dense food, especially those who are economically disadvantaged, will be central pillar address security. The strategy improving traits breeding programs has been prioritized with recent advancements phenotyping seeds grains (metabolomics, mineral vitamins, assessing starch, proteins lipids, capturing preferred traits), sequencing technologies do high-throughput genotyping, functional genomics aided gene discovery, high-resolution trait mapping superior haplotype as well deploying genomic selection tools variety crops (Pandey et al., 2016; Varshney 2019). To improve dietary patterns, new generation foods ingredients improved intrinsic attributes needs generated through advanced methods. This help public health by increasing density optimizing complex carbohydrates, proteins, lipids. utilizing integrating both modern traditional techniques, it possible hasten production types yield, grain, quality. special issue highlights most significant findings, which cover developments genomics, including prediction related quality, enhancement nutritive cereals (rice, wheat, maize, oat) legume like groundnut. Overall, this includes collection studies deciphering genetic mechanisms micronutrients covering minerals such iron (Fe), zinc (Zn), vitamin enrichment (tocochromanols), pigmented bioactives, amino acids, fiber, fatty acid composition, safety, end user selected legumes. approach identifying regions controlling key nutrition successful contributed significantly marker discovery use (Cockram & Mackay, 2018). High concentrations essential lysine limiting high free asparagine prevent acrylamide during bread formation enhance wheat grain. article Oddy al. (2023) used understanding control composition UK soft major emphasis on lowering higher content. multivariate analysis showing these largely independent one another, largest effect acids being from environment. study also identified quantitative loci (QTLs) content, may prove useful applying appropriate strategies reduce programmes. Using same groundnut, Parmar co-localized main candidate genes content Zn reports identification six main-effect QTLs Fe five Interestingly, three that further facilitate fine diagnostic development pooled sequencing-based region biparental Gangurde (2022) QTL-Seq markers seed weight. successfully associated weight 182 SNPs genic intergenic regions. Although multiple important regions, Ulp proteases BIG SEED locus very because its detection other well. More importantly breed groundnut varieties bigger size, gene-specific Kompetitive allele-specific PCR were developed validated. It vital determine Meta-QTLs haplotypes target traits, numerous found several areas form influence Joshi addresses aspect paper biofortification rice performing meta-analysis 155 followed 57 MQTLs reduced confidence intervals. importantly, not only detected co-localization metal homeostasis but involvement network silico expression co-expression analyses. Furthermore, efficient biofortification. Another led Diers presented results architecture concentration protein, oil, meal protein using soybean nested association reported 107 marker-trait associations (MTAs) above-mentioned traits. few MTAs mapped within 5 cM intervals (94%) effects matched correlation between linked suggested would more effective large number small Derbyshire utilized pangenome based thousands lines identify alleles involved biosynthesis. instances missing wild soybean, FAD8 FAD2-2D oleic linoleic desaturation, respectively. frequency missense biosynthesis genes, could domestication. genome-wide (GWAS) alternate plant species rely variation various core collections, instead developing populations (Gangurde 2022; Sushmitha 2023). Panahabadi uses monosaccharides contents rice. Monosaccharides building blocks synthesis polymers or carbohydrates. 49 housed 17 located seven chromosomes whole all novel. Multiple promising potential validation breeding. next Mbanjo performs GWAS linking pigmentation seed. >280 SNPs, many than secondary metabolite accumulation pigmentation. Further, targeted 67 52 showed 24 Rc/bHLH17 OsIPT5 regulation wide range phenolic compounds color. information made exploited deployment rice-breeding program. Genomic emerged powerful prediction-based progenies crop-breeding even early generation, therefore, saving resources, time, precision added advantage. There plenty testing statistical models maize wheat. now, huge training size constitution, genotyping platforms, keeping mind genotype interaction environment soil, possibilities selection. case published emerging area Research Tibbs-Cortes provided exciting exotic-derived tocochromanols (vitamin E), human diet. expected, accuracies achieved when predicting each decreased performed diversity panel set. strength hypothesis optimal designing efficiently incorporate exotic germplasm into Tanaka worked sound data support prior QTL contributing causal conferring biological knowledge elevate E improves multi-trait model two panels inbred lines. Next, research Brzozowski was oat targeting methods 12 indicated variability accuracy family compared unrelated panel. families had half-sib set without it, suggesting approach. Meher tested eight Bayesian micro-nutrient Zn, Fe, β-carotenoid ridge regression reliable method revalidated reliability increases increase BLUE values response variables better Fradgeley summarized maintenance Bread Baking Quality trends over 50 years future application genomic-assisted no subsequent net loss gain due breeders’ selection, despite yield time. proposed reduction increased gluten combination changes industrial baking process enabled decades. Most diverse varied algorithm clarity best models, can realistic scenarios Gill implementing processing end-use hard winter (MTGP) outperformed single up twofold accuracy. suggests MTGP together flour sedimentation evaluated earlier generations predict generations. issue, review articles focusing nutrients plants Khan another allergens (2023). under changing environments role stressful biotechnological optimization nutrient acquisition, transport, distribution plants. provides bio-fortification optimize stress conditions emphasizes about concerns safety need protect negative food-born allergies. current updates predicts prospects allergen-depleted crops. discussed detail how advances molecular breeding, engineering, genome editing potentially health. Manish K. Pandey: Conceptualization; investigation; methodology; project administration; resources; supervision; writing—original draft; writing—review editing. Reyazul Rouf Mir: Nese Sreenivasulu:

Language: Английский

Citations

0