Frontiers in Molecular Neuroscience,
Journal Year:
2024,
Volume and Issue:
17
Published: Dec. 23, 2024
Utricle
is
an
important
vestibular
sensory
organ
for
maintaining
balance.
3,3′-iminodipropionitrile
(IDPN),
a
prototype
nitrile
toxin,
has
been
reported
to
be
neurotoxic
and
vestibulotoxic,
can
used
establish
in
vivo
damage
model
of
dysfunction.
However,
the
mechanism
utricular
HCs
caused
by
IDPN
unclear.
Here,
we
first
studied
mice
balance
behavior
utricle
model,
found
that
injection
cause
dysfunction
damage,
which
more
pronounced
than
neomycin
model.
Then
RNA-seq
characterize
transcriptome
damaged
detail
identify
genes
pathways
play
roles
this
process.
We
1,165
upregulated
1,043
downregulated
utricles,
identified
NF-κB
pathway
TNF
may
Our
study
provides
details
further
Frontiers in Cellular Neuroscience,
Journal Year:
2024,
Volume and Issue:
18
Published: March 7, 2024
Globally,
millions
of
individuals
are
impacted
by
neurodegenerative
disorders
including
Huntington's
disease
(HD),
amyotrophic
lateral
sclerosis
(ALS),
Parkinson's
(PD),
and
Alzheimer's
(AD).
Although
a
great
deal
energy
financial
resources
have
been
invested
in
disease-related
research,
breakthroughs
therapeutic
approaches
remain
elusive.
The
breakdown
cells
usually
happens
together
with
the
onset
diseases.
However,
mechanism
that
triggers
neuronal
loss
is
unknown.
Lipid
peroxidation,
which
iron-dependent,
causes
specific
type
cell
death
called
ferroptosis,
there
evidence
its
involvement
pathogenic
cascade
mechanisms
still
not
well
known.
present
article
highlights
basic
processes
underlie
ferroptosis
corresponding
signaling
networks.
Furthermore,
it
provides
an
overview
discussion
current
research
on
role
across
variety
conditions.
Frontiers in Cell and Developmental Biology,
Journal Year:
2025,
Volume and Issue:
13
Published: March 12, 2025
Rapid
activation
of
adenosine
monophosphate-activated
protein
kinase
(AMPK)
induces
phosphorylation
mitochondrial-associated
proteins,
a
process
by
which
phosphate
groups
are
added
to
regulate
mitochondrial
function,
thereby
modulating
energy
metabolism,
triggering
an
acute
metabolic
response,
and
sustaining
adaptation
through
transcriptional
regulation.
AMPK
directly
phosphorylates
folliculin
interacting
1
(FNIP1),
leading
the
nuclear
translocation
transcription
factor
EB
(TFEB)
in
response
functions.
While
function
is
tightly
linked
finely-tuned
energy-sensing
mobility,
FNIP1
plays
critical
roles
glucose
transport
sensing,
autophagy,
cellular
stress
muscle
fiber
contraction.
Consequently,
emerges
as
promising
novel
target
for
addressing
aberrant
metabolism.
Recent
evidence
indicates
that
implicated
biology
various
pathways,
including
AMPK,
mTOR,
ubiquitination,
oxidative
responses,
skeletal
Nonetheless,
there
dearth
literature
discussing
physiological
mechanism
action
therapeutic
target.
This
review
outlines
how
regulates
metabolic-related
signaling
pathways
enzyme
activities,
such
catalytic
activity
enzymes,
homeostasis
products,
controlling
fate
different
contexts.
Our
focus
will
be
on
elucidating
these
metabolite-mediated
processes
inflammatory
diseases.
Neurological Research,
Journal Year:
2025,
Volume and Issue:
unknown, P. 1 - 12
Published: April 3, 2025
Proteomics
has
revealed
links
between
plasma
proteins
and
ischemic
stroke
(IS),
but
the
relationship
protein
ratios,
IS,
effects
of
blood
cells
serum
uric
acid
(SUA)
is
underexplored.
Using
two-sample
Mendelian
randomization
(MR),
we
assessed
causal
relationships
2,821
91
phenotypes,
SUA,
IS
subtypes.
FDR
correction
was
applied
specifically
to
ratio
analyses
account
for
multiple
comparisons
in
primary
MR
step.
Significant
associations
were
further
validated
through
co-localization
analysis,
which
shared
genetic
architecture
exposure
outcome
loci.
This
analysis
used
GWAS
data
from
MEGASTROKE,
GISCOME,
minimizing
confounding
bias
reverse
causation.
Additionally,
total
levels
on
decomposed
into
direct
indirect
mediated
pathways.
Sensitivity
ensured
robustness.
The
CD34/ITGAV
exhibited
distinct
risk,
showing
34.9%
increased
odds
LAS
(OR=1.349,
95%
CI=1.097-1.658)
while
demonstrating
protective
against
progression
(OR=0.564,
CI=0.380-0.838).
Bayesian
complete
overlap
(PPH4
=
1)
key
ratio-stroke
subtype
pairs:
AIS
with
TGFBR2/THBD
ratio,
LGALS8/VWF
CES
BST2/CEACAM1
CD209/CLEC4G
ratios.
In
mediation
pathways,
neutrophil
parameters
accounted
54.4%
prognosis
effect
ABHD14B/STAMBP-IS
association,
whereas
SUA
only
1.3%
PODXL2/SDC1
ratio-IS
relationship.
Our
study
combined
identifies
interactions
highlighting
potential
targets
disrupt
pathways
connecting
changes
incidence
outcomes,
offering
promising
intervention
avenues.
Abstract
The
lysosomal
damage
response
is
important
for
the
maintenance
of
cellular
homeostasis.
Although
mechanisms
underlying
repair
and
autophagic
elimination
damaged
lysosomes
have
been
elucidated,
early
signal
transduction
pathways
genes
induced
in
to
remain
elusive.
We
performed
transcriptome
proteome
analyses
found
that
TAB–TAK1–IKK–NF-κB
axis
activated
by
K63-linked
ubiquitin
chains
accumulate
on
lysosomes.
This
activates
expression
various
transcription
factors
cytokines
promote
anti-apoptosis
intercellular
signaling.
findings
highlight
crucial
role
ubiquitin-regulated
gene
cell
survival
cell–cell
communication
damage.
results
suggest
system
not
only
involved
removal
lysophagy,
but
also
functions
activation
signaling
survival.
Abstract
The
lysosomal
damage
response
is
important
for
the
maintenance
of
cellular
homeostasis.
Although
mechanisms
underlying
repair
and
autophagic
elimination
damaged
lysosomes
have
been
elucidated,
early
signal
transduction
pathways
genes
induced
in
to
remain
elusive.
We
performed
transcriptome
proteome
analyses
found
that
TAB–TAK1–IKK–NF-κB
axis
activated
by
K63-linked
ubiquitin
chains
accumulate
on
lysosomes.
This
activates
expression
various
transcription
factors
cytokines
promote
anti-apoptosis
intercellular
signaling.
findings
highlight
crucial
role
ubiquitin-regulated
gene
cell
survival
cell–cell
communication
damage.
results
suggest
system
not
only
involved
removal
lysophagy,
but
also
functions
activation
signaling
survival.
Biotechnology and Applied Biochemistry,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Dec. 25, 2024
ABSTRACT
Non‐small
cell
lung
cancer
(NSCLC)
is
the
most
pervasive
sort
of
with
deadly
outcome.
According
to
recent
studies,
a
number
neoplastic
disorders
and
ferroptosis
are
intimately
connected.
This
study
aims
identify
role
key
ferroptosis‐related
gene
(protein
kinase
AMP‐activated
catalytic
subunit
alpha
2,
PRKAA2)
explore
new
directions
for
diagnosis
treatment
NSCLC.
The
PRKAA2
expression
its
influence
on
survival
were
analyzed
in
multiple
public
databases
(TCGA,
TIMER2.0,
GEPIA).
And
mRNA
level
NSCLC
cells
examined
by
qRT‐PCR.
Silencing
(sh‐PRKAA2)
used
transfection.
CCK‐8,
EdU,
flow
cytometry
assays
measure
proliferation
apoptosis.
protein
levels
markers
(SLC7A11,
GPX4,
NRF2)
determined
western
blotting.
Meanwhile,
related
analysis,
such
as
malondialdehyde
(MDA)
glutathione
(GSH),
reactive
oxygen
species
(ROS),
iron,
Fe
2+
also
detected
transfected
cells.
Moreover,
relationship
between
SLC7A11
was
analyzed.
xenograft
mouse
models
vivo
verification
function.
Here,
our
data
revealed
that
upregulated
Additionally,
strengthened
attenuated
apoptosis
depletion
enhanced
erastin‐induced
inhibition
effect
growth,
notably
increased
MDA,
ROS,
,
while
decreased
GSH
In
mechanism
exploration,
we
discovered
could
activate
SLC7A11/GSH/GPx4
antioxidant
pathway.
rescue
experiments
showed
abrogated
inhibitive
impacts
repression
cellular
proliferation,
apoptosis,
Besides,
animal
proved
tumor
growth
vivo.
results
accelerated
malignant
progression,
diminished
through
SLC7A11/GSH/GPX4
provide
novel
target
application
treatment.
Neurobiology of Disease,
Journal Year:
2024,
Volume and Issue:
202, P. 106728 - 106728
Published: Nov. 1, 2024
Activating
mutations
in
Leucine
Rich
Repeat
Kinase
2
(LRRK2)
are
among
the
most
common
genetic
causes
of
Parkinson's
disease
(PD).
The
mechanistic
path
from
LRRK2
to
PD
is
not
established,
but
several
lines
data
suggest
that
modulation
lysosomal
function
involved.
It
has
previously
been
shown
recruited
lysosomes
upon
damage
leading
increased
phosphorylation
its
RAB
GTPase
substrates
macrophage-derived
RAW
264.7
cells.
Here,
we
find
kinase
inhibition
reduces
cell
death
induced
by
lysosomotropic
compound
LLOMe
cells
showing
and
functionally
interacts
both
directions:
can
lead
activation
signaling
attenuate
LLOMe-induced
death.
effect
lysosome
specific,
as
only
stressors
a
variety
other
inducers
could
be
modulated
inhibition.
We
show
with
timing
Lysotracker
experiments
does
affect
immediate
permeabilization
LLOMe,
rather
modulates
subsequent
cellular
response
damage.
siRNA-mediated
knockdown
main
substrates,
GTPases,
showed
RAB8A
death,
GTPases
tested.
An
RNA
sequencing
study
was
done
identify
downstream
pathways
striking
finding
almost
all
cholesterol
biosynthesis
genes
were
strongly
downregulated
upregulated
combination
treatment.
To
explore
functional
relevance
transcriptional
changes,
pretreated
NPC1
inhibitor
U18666A
accumulation
cholesterol.
U18666A-treated
less
sensitive
attenuation
reduced
suggesting
overlapping
mechanisms.
Thus,
our
demonstrates
LRRK2-
RAB8A-mediated