Co-occurrence Networks and Topological Analyses Revealed Microbiome Structures in Soybean Roots from a Louisiana Soybean Field Severely Damaged by Prolonged High Temperatures and Drought Stress DOI Open Access
Sandeep Gouli, Aqsa Majeed, Jinbao Liu

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Jan. 18, 2024

Abstract Drought stress has a significant impact on agricultural productivity, affecting key crops such as soybeans, the second most widely cultivated crop in United States. We conducted endophytic and rhizospheric microbial diversity analyses soybean plants during 2023 growing season, amid extreme weather conditions of prolonged high temperatures drought Louisiana. Specifically, we collected surviving non-surviving from two plots Louisiana field severely damaged heat condition 2023. did not observe any difference rhizosphere between plants. However, found obvious differences structure community root tissues plant conditions. Especially, bacterial genera Proteobacteria, Pseudomonas Pantoea , were predominant tissues, while genus Streptomyces was conspicuously dominant (dead) tissues. Co-occurrence patterns network centrality enabled us to discern intricate characteristics operational taxonomic units (OTUs) within networks. Overall, this study advances our understanding relationship bacteria under stress, paving way for future research investigate importance affected regions

Language: Английский

Biopesticides as a promising alternative to synthetic pesticides: A case for microbial pesticides, phytopesticides, and nanobiopesticides DOI Creative Commons
Modupe S. Ayilara, Bartholomew Saanu Adeleke, Saheed Adekunle Akinola

et al.

Frontiers in Microbiology, Journal Year: 2023, Volume and Issue: 14

Published: Feb. 16, 2023

Over the years, synthetic pesticides like herbicides, algicides, miticides, bactericides, fumigants, termiticides, repellents, insecticides, molluscicides, nematicides, and pheromones have been used to improve crop yield. When are used, over-application excess discharge into water bodies during rainfall often lead death of fish other aquatic life. Even when fishes still live, their consumption by humans may biomagnification chemicals in body system can cause deadly diseases, such as cancer, kidney diabetes, liver dysfunction, eczema, neurological destruction, cardiovascular so on. Equally, harm soil texture, microbes, animals, plants. The dangers associated with use necessitated need for alternative organic (biopesticides), which cheaper, environment friendly, sustainable. Biopesticides be sourced from microbes (e.g., metabolites), plants exudates, essential oil, extracts bark, root, leaves), nanoparticles biological origin silver gold nanoparticles). Unlike pesticides, microbial specific action, easily without expensive chemicals, environmentally sustainable residual effects. Phytopesticides myriad phytochemical compounds that make them exhibit various mechanisms likewise, they not release greenhouse gases lesser risks human health compared available pesticides. Nanobiopesticides higher pesticidal activity, targeted or controlled top-notch biocompatibility biodegradability. In this review, we examined different types merits, demerits biopesticides, but more importantly, x-rayed appropriate approaches acceptability commercial usage phytopesticides, nanobiopesticides plant nutrition, protection/yield, animal/human promotion, possible incorporation integrated pest management system.

Language: Английский

Citations

214

Impact of plant growth-promoting rhizobacteria (PGPR) on plant nutrition and root characteristics: Current perspective DOI Creative Commons
Muneer Ahmed Khoso, Sindho Wagan, Intikhab Álam

et al.

Plant Stress, Journal Year: 2023, Volume and Issue: 11, P. 100341 - 100341

Published: Dec. 28, 2023

Through a variety of mechanisms, including increasing the amount readily available mineral nutrients, regulating phytohormone levels, and biocontrol phytopathogens, plant growth-promoting rhizobacteria (PGPR) associated with rhizosphere either directly or indirectly stimulates growth development. The establishment, survival, persistence PGPR inoculants are widely acknowledged to be contingent upon these two parameters, in addition intricate network interactions within rhizosphere. In general, soil is moist environment significant amounts carbon that have been degraded harbors large population microbes. rhizo-microbiome crucial agriculture because wide root exudates cell debris attract unique distinct patterns microbial colonization. plays role manufacture regulation extracellular molecules, hormones, secondary metabolites, antibiotics, various signaling chemicals. Additionally, composition influences texture enhancement. Research has shown can used treat plants inoculate promote alters physiology entire plant, which enhances nutrient uptake affects effectiveness activity. specific biochemical processes involved this phenomenon often not well understood. Nevertheless, new studies shed light on mechanisms via by induce responses, both at local systemic levels. Insufficient information regarding impact mechanism molecules metabolic pathways characteristics. Consequently, review will concentrate elucidating identifying essential exert influence root-microbe interactions.

Language: Английский

Citations

65

Assessing Morpho-Physiological and Biochemical Markers of Soybean for Drought Tolerance Potential DOI Open Access
Mst. Kaniz Fatema,

Muhammad Abdullah Al Mamun,

Umakanta Sarker

et al.

Sustainability, Journal Year: 2023, Volume and Issue: 15(2), P. 1427 - 1427

Published: Jan. 11, 2023

Drought stress provokes plants to change their growth pattern and biochemical contents overcome adverse situations. Soybean was grown under 40 (drought) 80% (control) of field capacity (FC) determine the morpho-physiological alterations that occur drought conditions. The experiment conducted following a randomized complete block design with three replications. results showed exerted detrimental effects on photosynthetic attributes, leaf production, pigment water content, plant growth, dry matter production soybean. However, favored producing higher amount proline malondialdehyde in soybean than control. pod seed grain size, yield were also adversely affected by drought, where genotypic variations conspicuous. Interestingly, studied parameters AGS383 minimally drought. This genotype capable maintaining healthier root shoot greater area, preserving greenness cell membrane stability, photosynthesis, absorbing sustaining potential, lower heavier grains make it out yielder both Considering changes morpho-physiological, biochemical, contributing parameters, could be cultivated as relatively drought-tolerant, high-yielding variety. Further study is needed uncover genes responsible for adaptation drought-stress environments, this might used parent material breeding program develop high-yielding, drought-tolerant

Language: Английский

Citations

25

The silicon regulates microbiome diversity and plant defenses during cold stress in Glycine max L. DOI Creative Commons
Waqar Ahmad,

Lauryn Coffman,

Aruna Weerasooriya

et al.

Frontiers in Plant Science, Journal Year: 2024, Volume and Issue: 14

Published: Jan. 10, 2024

With climate change, frequent exposure of bioenergy and food crops, specifically soybean (

Language: Английский

Citations

12

Biocontrol potential of endophytic bacterium Bacillus altitudinis GS-16 against tea anthracnose caused by Colletotrichum gloeosporioides DOI Creative Commons

Youzhen Wu,

Yumei Tan,

Qiuju Peng

et al.

PeerJ, Journal Year: 2024, Volume and Issue: 12, P. e16761 - e16761

Published: Jan. 9, 2024

Background As one of the main pathogens causing tea anthracnose disease, Colletotrichum gloeosporioides has brought immeasurable impact on sustainable development agriculture. Given adverse effects chemical pesticides to environment and human health, biological control been a focus research this pathogen. Bacillus altitudinis GS-16, which was isolated from healthy leaves, had exhibited strong antagonistic activity against disease. Methods The antifungal mechanism endophytic bacterium GS-16 C. 1-F determined by dual-culture assays, pot experiments, cell membrane permeability, cellular contents, metabolism, activities key defense enzymes. Results We investigated possible strain inhibiting 1-F. In vitro , assays revealed that significant (92.03%) broad-spectrum in all tested plant pathogens. disease index decreased 6.12 after treatment with indicating good biocontrol effect (89.06%). When PE extract treated mycelial 1-F, appeared deformities, distortions, swelling SEM observations. Besides that, compared negative control, contents nucleic acids, protein, total soluble sugar group were increased significantly, could cause damage integrity also found obviously destroyed metabolism normal synthesis contents. Additionally, induced resistance increasing enzymes PPO, SOD, CAT, PAL, POD. Conclusions concluded permeability integrity, destroy induce resistance, contributed its activity. These findings indicated be used as an efficient microorganism for caused .

Language: Английский

Citations

9

Harnessing bacterial endophytes for environmental resilience and agricultural sustainability DOI
Murad Muhammad, Abdul Wahab, Abdul Waheed

et al.

Journal of Environmental Management, Journal Year: 2024, Volume and Issue: 368, P. 122201 - 122201

Published: Aug. 14, 2024

Language: Английский

Citations

8

Rhizosphere Microbiomes Mediating Abiotic Stress Mitigation for Improved Plant Nutrition DOI Creative Commons
Bartholomew Saanu Adeleke, Parul Chaudhary, Modupe S. Ayilara

et al.

Ecologies, Journal Year: 2024, Volume and Issue: 5(3), P. 375 - 401

Published: July 27, 2024

The extreme conditions linked with abiotic stresses have greatly affected soil and plant health. diverse biochemical activities occurring in the environment been attributed to shaping dynamics of plant–soil microbiomes by contributing microbial lifestyles enhancing functional properties boost tolerance abiotic-induced stresses. Soil play crucial roles nutrition stress management through mechanisms. With current insights into use engineered microbes as single or combined inoculants, their has contributed fitness stability under different environmental activating defense mechanisms, enzyme production (lowering free radicals resulting oxidative stress), protein regulation, growth factors. detection certain genes involved factors can underline functions mitigating stress. Hence, projections for sustainable eco-friendly agriculture possible exploration beneficial rhizosphere manage effect on remain critical points discussion recently, prospects ensuring food security. Therefore, this review focuses impacts mitigation nutrition.

Language: Английский

Citations

7

Genomic Insight into a Potential Biological Control Agent for Fusarium-Related Diseases in Potatoes: Bacillus cabrialesii Subsp. cabrialesii Strain PE1 DOI Creative Commons

Brenda Valenzuela-Aragon,

Amelia C. Montoya-Martínez, Fannie Isela Parra-Cota

et al.

Horticulturae, Journal Year: 2024, Volume and Issue: 10(4), P. 357 - 357

Published: April 4, 2024

Bacillus strain PE1, which was isolated from potatoes harvested in the Yaqui Valley, Mexico, evaluated as a potential biological control agent against Fusarium languescens. The draft genome sequence obtained through Illumina NovaSeq sequencing, revealing genomic size of 4,071,293 bp, with G + C content 44.13%, an N50 value 357,305 and 27 contigs. taxonomic affiliation confirmed by analyzing 16S rRNA gene overall relatedness indices (OGRIs) constructing phylogenomic tree based on whole genome, showed close relationship to cabrialesii subsp. cabrialesii. Genomic annotation using RAST Prokka identified 4261 coding DNA sequences (CDSs) distributed across 331 subsystems, highlighting genes associated biocontrol, stress response, iron acquisition. AntiSMASH 7.1 used for mining, seven biosynthetic clusters that potentially produce biocontrol-related metabolites. In vitro assays antagonistic activity PE1 languescens CE2, demonstrating its inhibit mycelial growth. study provides basis investigating B. potato production.

Language: Английский

Citations

5

Species Diversity, Nitrogen Fixation, and Nutrient Solubilization Activities of Endophytic Bacteria in Pea Embryos DOI Creative Commons

Junjie Hao,

Xiaoyan Zhang,

Shizuo Qiu

et al.

Applied Sciences, Journal Year: 2024, Volume and Issue: 14(2), P. 788 - 788

Published: Jan. 17, 2024

Endophytic bacteria, especially those that participate in nitrogen fixation, play critical roles supplying essential nutrients for legume plant growth. Despite there have been numerous investigations targeting bacterial microbiomes roots and nodules, little is known about embryonic bacteria facilitate nutrient utilization after seed germination. Here, we collected investigated endophytic microbiome edible pea (Pisum sativum) embryos using five representative cultivars a sprout (shoot of [SHP]) control. Twenty-six nitrogen-fixing (NFB) were isolated from embryos, with three strains found fresh grain (FGP) snow (SP) exhibiting the strongest nitrogenase activity above 85 nmol C2H4/mL/h. Some NFB isolates are also potassium-solubilizing (KSB) or phosphorus-solubilizing (PSB) utilizing inorganic and/or organic phosphorus. All 26 showed variable levels (0.41 to 7.10 μg/mL) indole-3-acetic acid (IAA) secretion. The nutrient-solubilizing identified our research potential targets biofertilizer development. They could be useful converting nitrogen, potassium, phosphorus into usable forms plants. At level, high-throughput 16S ribosomal RNA (rRNA) sequencing 40 collections generated 4234 operational taxonomic units (OTUs) 97% identity as threshold clustering high-quality effective reads (valid tags). Analysis OTU annotation results revealed similar species community structures, abundance, diversity most samples. Our embryo-derived pool provides platform dormancy germination peas, well digging new resources general.

Language: Английский

Citations

4

Advances in Soybean Genetic Improvement DOI Creative Commons

Adriana Vargas-Almendra,

Roberto Ruíz‐Medrano, Leandro Alberto Núñez-Muñoz

et al.

Plants, Journal Year: 2024, Volume and Issue: 13(21), P. 3073 - 3073

Published: Oct. 31, 2024

The soybean (

Language: Английский

Citations

4