Purines enrich root-associated Pseudomonas and improve wild soybean growth under salt stress DOI Creative Commons
Yanfen Zheng,

Xuwen Cao,

Yanan Zhou

et al.

Nature Communications, Journal Year: 2024, Volume and Issue: 15(1)

Published: April 25, 2024

Abstract The root-associated microbiota plays an important role in the response to environmental stress. However, underlying mechanisms controlling interaction between salt-stressed plants and are poorly understood. Here, by focusing on a salt-tolerant plant wild soybean ( Glycine soja ), we demonstrate that highly conserved microbes dominated Pseudomonas enriched root rhizosphere of plant. Two corresponding isolates confirmed enhance salt tolerance soybean. Shotgun metagenomic metatranscriptomic sequencing reveal motility-associated genes, mainly chemotaxis flagellar assembly, significantly expressed salt-treated samples. We further find roots stressed secreted purines, especially xanthine, which induce motility isolates. Moreover, exogenous application for xanthine non-stressed results enrichment, reproducing shift root. Finally, mutant analysis shows related gene cheW is required toward enhancing tolerance. Our study proposes recruits beneficial species exudating key metabolites (i.e., purine) against

Language: Английский

Linking Plant Secondary Metabolites and Plant Microbiomes: A Review DOI Creative Commons
Zhiqiang Pang, Jia Chen, Tuhong Wang

et al.

Frontiers in Plant Science, Journal Year: 2021, Volume and Issue: 12

Published: March 2, 2021

Plant secondary metabolites (PSMs) play many roles including defense against pathogens, pests, and herbivores; response to environmental stresses, mediating organismal interactions. Similarly, plant microbiomes participate in of the above-mentioned processes directly or indirectly by regulating metabolism. Studies have shown that plants can influence their microbiome secreting various and, turn, may also impact metabolome host plant. However, not much is known about communications between interacting partners phenotypic changes. In this article, we review patterns potential underlying mechanisms interactions PSMs microbiomes. We describe recent developments analytical approaches methods field. The applications these new increased our understanding relationships Though current studies primarily focused on model organisms, results obtained so far should help future agriculturally important facilitate development manipulate PSMs–microbiome with predictive outcomes for sustainable crop productions.

Language: Английский

Citations

474

Insights into the Interactions among Roots, Rhizosphere, and Rhizobacteria for Improving Plant Growth and Tolerance to Abiotic Stresses: A Review DOI Creative Commons
Naeem Khan, Shahid Ali,

Muhammad Adnan Shahid

et al.

Cells, Journal Year: 2021, Volume and Issue: 10(6), P. 1551 - 1551

Published: June 19, 2021

Abiotic stresses, such as drought, salinity, heavy metals, variations in temperature, and ultraviolet (UV) radiation, are antagonistic to plant growth development, resulting an overall decrease yield. These stresses have direct effects on the rhizosphere, thus severely affect root growth, thereby affecting health, productivity. However, growth-promoting rhizobacteria that colonize rhizosphere/endorhizosphere protect roots from adverse of abiotic stress facilitate by various indirect mechanisms. In plants constantly interacting with thousands these microorganisms, yet it is not very clear when how complex root, interactions occur under stresses. Therefore, present review attempts focus root-rhizosphere rhizobacterial respond interactions, role Further, focuses underlying mechanisms employed for improving architecture tolerance

Language: Английский

Citations

220

The Role of Plant Growth-Promoting Rhizobacteria (PGPR) in Mitigating Plant’s Environmental Stresses DOI Creative Commons
Marco Vocciante, Martina Grifoni, Danilo Fusini

et al.

Applied Sciences, Journal Year: 2022, Volume and Issue: 12(3), P. 1231 - 1231

Published: Jan. 25, 2022

Phytoremediation is a cost-effective and sustainable technology used to clean up pollutants from soils waters through the use of plant species. Indeed, plants are naturally capable absorbing metals degrading organic molecules. However, in several cases, presence contaminants causes suffering limited growth. In such situations, thanks production specific root exudates, can engage most suitable bacteria able support their growth according particular environmental stress. These growth-promoting rhizobacteria (PGPR) may facilitate development with beneficial effects, even more evident when grown critical conditions, as toxic contaminants. For instance, PGPR alleviate metal phytotoxicity by altering bioavailability soil increasing translocation within plant. Since many also hydrocarbon oxidizers, they enhance biodegradation activity. Besides, agriculture be an excellent counter devastating effects abiotic stress, excessive salinity drought, replacing expensive inorganic fertilizers that hurt environment. A better in-depth understanding function interactions associated microorganisms directly matrix interest, especially persistent contamination, could provide new opportunities for phytoremediation.

Language: Английский

Citations

205

How plants recruit their microbiome? New insights into beneficial interactions DOI Creative Commons
Gustavo Santoyo

Journal of Advanced Research, Journal Year: 2021, Volume and Issue: 40, P. 45 - 58

Published: Dec. 4, 2021

Research on beneficial mechanisms by plant-associated microbiomes, such as plant growth stimulation and protection from pathogens, has gained considerable attention over the past decades; however, used plants to recruit their microbiome is largely unknown.Here, we review latest studies that have begun reveal strategies in selectively recruiting how they manage exclude potential pathogens. Key Scientific concepts of Review: We examine attract microbiota main areas interaction, rhizosphere, endosphere, phyllosphere, demonstrate process occurs producing root exudates, recognizing molecules produced or distinguishing pathogens using specific receptors, triggering signals support plant-microbiome homeostasis. Second, analyzed environmental biotic factors modulate structure successional dynamics microbial communities. Finally, associated capable engaging with other synergistic microbes, hence providing an additional element selection. Collectively, this study reveals importance understanding complex network interactions, which will improve bioinoculant application agriculture, based a interacts efficiently organs under different conditions.

Language: Английский

Citations

199

Root exudates ameliorate cadmium tolerance in plants: A review DOI

Aditi Shreeya Bali,

Gagan Preet Singh Sidhu, Vinod Kumar

et al.

Environmental Chemistry Letters, Journal Year: 2020, Volume and Issue: 18(4), P. 1243 - 1275

Published: May 9, 2020

Language: Английский

Citations

174

Multifaceted roles of flavonoids mediating plant-microbe interactions DOI Creative Commons
Lanxiang Wang, Mo‐Xian Chen, Pui Ying Lam

et al.

Microbiome, Journal Year: 2022, Volume and Issue: 10(1)

Published: Dec. 16, 2022

Plant-microbe interactions dynamically affect plant growth, health, and development. The mechanisms underpinning these associations are-to a large extent-mediated by specialized host-derived secondary metabolites. Flavonoids are one of the most studied classes such metabolites, regulating both development interaction with commensal microbes. Here, we provide comprehensive review multiple roles flavonoids in mediating plant-microbe interactions. First, briefly summarize general aspects flavonoid synthesis, transport, exudation plants. Then, importance influencing overall community assembly plant-root microbiomes. Last, highlight potential knowledge gaps our understanding how determine between plants Collectively, advocate advancing research this area toward innovative strategies to effectively manipulate plant-microbiome composition, case, via production roots. Video Abstract.

Language: Английский

Citations

162

Soil Organic Matter Characterization by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICR MS): A Critical Review of Sample Preparation, Analysis, and Data Interpretation DOI
William Bahureksa, Malak Tfaily, Rene Boiteau

et al.

Environmental Science & Technology, Journal Year: 2021, Volume and Issue: 55(14), P. 9637 - 9656

Published: July 7, 2021

The biogeochemical cycling of soil organic matter (SOM) plays a central role in regulating health, water quality, carbon storage, and greenhouse gas emissions. Thus, many studies have been conducted to reveal how anthropogenic climate variables affect sequestration nutrient cycling. Among the analytical techniques used better understand speciation transformation SOM, Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) is only technique that has sufficient resolving power separate accurately assign elemental compositions individual SOM molecules. global increase application FTICR MS address complexity highlighted challenges opportunities associated with sample preparation, analysis, spectral interpretation. Here, we provide critical review recent strategies for characterization by emphasis on collection, data Data processing visualization methods are presented suggested workflows detail considerations needed molecular information derived from MS. Finally, highlight current research gaps, biases, future directions improve our understanding chemistry within terrestrial ecosystems.

Language: Английский

Citations

159

Recent Advances in Carbon and Nitrogen Metabolism in C3 Plants DOI Open Access
Marouane Baslam, Toshiaki Mitsui,

Kuni Sueyoshi

et al.

International Journal of Molecular Sciences, Journal Year: 2020, Volume and Issue: 22(1), P. 318 - 318

Published: Dec. 30, 2020

C and N are the most important essential elements constituting organic compounds in plants. The shoots roots depend on each other by exchanging through xylem phloem transport systems. Complex mechanisms regulate metabolism to optimize plant growth, agricultural crop production, maintenance of agroecosystem. In this paper, we cover recent advances understanding metabolism, regulation, plants, as well their underlying molecular mechanisms. Special emphasis is given starch plastids changes responses environmental stress that were previously overlooked, since these provide an store fuels growth. We present general insights into system biology approaches have expanded our core biological questions related metabolism. Finally, review synthesizes trade-off concept links status plant's response microorganisms.

Language: Английский

Citations

152

Biological nitrogen fixation and prospects for ecological intensification in cereal-based cropping systems DOI Creative Commons
J. K. Ladha, Mark B. Peoples, P. M. Reddy

et al.

Field Crops Research, Journal Year: 2022, Volume and Issue: 283, P. 108541 - 108541

Published: April 17, 2022

The demand for nitrogen (N) crop production increased rapidly from the middle of twentieth century and is predicted to at least double by 2050 satisfy on-going improvements in productivity major food crops such as wheat, rice maize that underpin staple diet most world's population. will need be fulfilled two main sources N supply – biological (gas) (N2) fixation (BNF) fertilizer supplied through Haber-Bosch processes. BNF provides many functional benefits agroecosystems. It a vital mechanism replenishing reservoirs soil organic improving availability support growth while also assisting efforts lower negative environmental externalities than N. In cereal-based cropping systems, legumes symbiosis with rhizobia contribute largest input; however, diazotrophs involved non-symbiotic associations plants or present free-living N2-fixers are ubiquitous provide an additional source fixed This review presents current knowledge free-living, symbiotic global cycle, examines regional estimates contributions BNF, discusses possible strategies enhance prospective benefit cereal nutrition. We conclude considering challenges introducing planta into cereals reflect on potential both conventional alternative management systems encourage ecological intensification legume production.

Language: Английский

Citations

149

Rhizoremediation as a green technology for the remediation of petroleum hydrocarbon-contaminated soils DOI
Son A. Hoang, Dane Lamb, Balaji Seshadri

et al.

Journal of Hazardous Materials, Journal Year: 2020, Volume and Issue: 401, P. 123282 - 123282

Published: June 23, 2020

Language: Английский

Citations

146