Nature Communications,
Journal Year:
2024,
Volume and Issue:
15(1)
Published: April 25, 2024
Abstract
The
root-associated
microbiota
plays
an
important
role
in
the
response
to
environmental
stress.
However,
underlying
mechanisms
controlling
interaction
between
salt-stressed
plants
and
are
poorly
understood.
Here,
by
focusing
on
a
salt-tolerant
plant
wild
soybean
(
Glycine
soja
),
we
demonstrate
that
highly
conserved
microbes
dominated
Pseudomonas
enriched
root
rhizosphere
of
plant.
Two
corresponding
isolates
confirmed
enhance
salt
tolerance
soybean.
Shotgun
metagenomic
metatranscriptomic
sequencing
reveal
motility-associated
genes,
mainly
chemotaxis
flagellar
assembly,
significantly
expressed
salt-treated
samples.
We
further
find
roots
stressed
secreted
purines,
especially
xanthine,
which
induce
motility
isolates.
Moreover,
exogenous
application
for
xanthine
non-stressed
results
enrichment,
reproducing
shift
root.
Finally,
mutant
analysis
shows
related
gene
cheW
is
required
toward
enhancing
tolerance.
Our
study
proposes
recruits
beneficial
species
exudating
key
metabolites
(i.e.,
purine)
against
Frontiers in Plant Science,
Journal Year:
2021,
Volume and Issue:
12
Published: March 2, 2021
Plant
secondary
metabolites
(PSMs)
play
many
roles
including
defense
against
pathogens,
pests,
and
herbivores;
response
to
environmental
stresses,
mediating
organismal
interactions.
Similarly,
plant
microbiomes
participate
in
of
the
above-mentioned
processes
directly
or
indirectly
by
regulating
metabolism.
Studies
have
shown
that
plants
can
influence
their
microbiome
secreting
various
and,
turn,
may
also
impact
metabolome
host
plant.
However,
not
much
is
known
about
communications
between
interacting
partners
phenotypic
changes.
In
this
article,
we
review
patterns
potential
underlying
mechanisms
interactions
PSMs
microbiomes.
We
describe
recent
developments
analytical
approaches
methods
field.
The
applications
these
new
increased
our
understanding
relationships
Though
current
studies
primarily
focused
on
model
organisms,
results
obtained
so
far
should
help
future
agriculturally
important
facilitate
development
manipulate
PSMs–microbiome
with
predictive
outcomes
for
sustainable
crop
productions.
Cells,
Journal Year:
2021,
Volume and Issue:
10(6), P. 1551 - 1551
Published: June 19, 2021
Abiotic
stresses,
such
as
drought,
salinity,
heavy
metals,
variations
in
temperature,
and
ultraviolet
(UV)
radiation,
are
antagonistic
to
plant
growth
development,
resulting
an
overall
decrease
yield.
These
stresses
have
direct
effects
on
the
rhizosphere,
thus
severely
affect
root
growth,
thereby
affecting
health,
productivity.
However,
growth-promoting
rhizobacteria
that
colonize
rhizosphere/endorhizosphere
protect
roots
from
adverse
of
abiotic
stress
facilitate
by
various
indirect
mechanisms.
In
plants
constantly
interacting
with
thousands
these
microorganisms,
yet
it
is
not
very
clear
when
how
complex
root,
interactions
occur
under
stresses.
Therefore,
present
review
attempts
focus
root-rhizosphere
rhizobacterial
respond
interactions,
role
Further,
focuses
underlying
mechanisms
employed
for
improving
architecture
tolerance
Applied Sciences,
Journal Year:
2022,
Volume and Issue:
12(3), P. 1231 - 1231
Published: Jan. 25, 2022
Phytoremediation
is
a
cost-effective
and
sustainable
technology
used
to
clean
up
pollutants
from
soils
waters
through
the
use
of
plant
species.
Indeed,
plants
are
naturally
capable
absorbing
metals
degrading
organic
molecules.
However,
in
several
cases,
presence
contaminants
causes
suffering
limited
growth.
In
such
situations,
thanks
production
specific
root
exudates,
can
engage
most
suitable
bacteria
able
support
their
growth
according
particular
environmental
stress.
These
growth-promoting
rhizobacteria
(PGPR)
may
facilitate
development
with
beneficial
effects,
even
more
evident
when
grown
critical
conditions,
as
toxic
contaminants.
For
instance,
PGPR
alleviate
metal
phytotoxicity
by
altering
bioavailability
soil
increasing
translocation
within
plant.
Since
many
also
hydrocarbon
oxidizers,
they
enhance
biodegradation
activity.
Besides,
agriculture
be
an
excellent
counter
devastating
effects
abiotic
stress,
excessive
salinity
drought,
replacing
expensive
inorganic
fertilizers
that
hurt
environment.
A
better
in-depth
understanding
function
interactions
associated
microorganisms
directly
matrix
interest,
especially
persistent
contamination,
could
provide
new
opportunities
for
phytoremediation.
Journal of Advanced Research,
Journal Year:
2021,
Volume and Issue:
40, P. 45 - 58
Published: Dec. 4, 2021
Research
on
beneficial
mechanisms
by
plant-associated
microbiomes,
such
as
plant
growth
stimulation
and
protection
from
pathogens,
has
gained
considerable
attention
over
the
past
decades;
however,
used
plants
to
recruit
their
microbiome
is
largely
unknown.Here,
we
review
latest
studies
that
have
begun
reveal
strategies
in
selectively
recruiting
how
they
manage
exclude
potential
pathogens.
Key
Scientific
concepts
of
Review:
We
examine
attract
microbiota
main
areas
interaction,
rhizosphere,
endosphere,
phyllosphere,
demonstrate
process
occurs
producing
root
exudates,
recognizing
molecules
produced
or
distinguishing
pathogens
using
specific
receptors,
triggering
signals
support
plant-microbiome
homeostasis.
Second,
analyzed
environmental
biotic
factors
modulate
structure
successional
dynamics
microbial
communities.
Finally,
associated
capable
engaging
with
other
synergistic
microbes,
hence
providing
an
additional
element
selection.
Collectively,
this
study
reveals
importance
understanding
complex
network
interactions,
which
will
improve
bioinoculant
application
agriculture,
based
a
interacts
efficiently
organs
under
different
conditions.
Microbiome,
Journal Year:
2022,
Volume and Issue:
10(1)
Published: Dec. 16, 2022
Plant-microbe
interactions
dynamically
affect
plant
growth,
health,
and
development.
The
mechanisms
underpinning
these
associations
are-to
a
large
extent-mediated
by
specialized
host-derived
secondary
metabolites.
Flavonoids
are
one
of
the
most
studied
classes
such
metabolites,
regulating
both
development
interaction
with
commensal
microbes.
Here,
we
provide
comprehensive
review
multiple
roles
flavonoids
in
mediating
plant-microbe
interactions.
First,
briefly
summarize
general
aspects
flavonoid
synthesis,
transport,
exudation
plants.
Then,
importance
influencing
overall
community
assembly
plant-root
microbiomes.
Last,
highlight
potential
knowledge
gaps
our
understanding
how
determine
between
plants
Collectively,
advocate
advancing
research
this
area
toward
innovative
strategies
to
effectively
manipulate
plant-microbiome
composition,
case,
via
production
roots.
Video
Abstract.
Environmental Science & Technology,
Journal Year:
2021,
Volume and Issue:
55(14), P. 9637 - 9656
Published: July 7, 2021
The
biogeochemical
cycling
of
soil
organic
matter
(SOM)
plays
a
central
role
in
regulating
health,
water
quality,
carbon
storage,
and
greenhouse
gas
emissions.
Thus,
many
studies
have
been
conducted
to
reveal
how
anthropogenic
climate
variables
affect
sequestration
nutrient
cycling.
Among
the
analytical
techniques
used
better
understand
speciation
transformation
SOM,
Fourier
transform
ion
cyclotron
resonance
mass
spectrometry
(FTICR
MS)
is
only
technique
that
has
sufficient
resolving
power
separate
accurately
assign
elemental
compositions
individual
SOM
molecules.
global
increase
application
FTICR
MS
address
complexity
highlighted
challenges
opportunities
associated
with
sample
preparation,
analysis,
spectral
interpretation.
Here,
we
provide
critical
review
recent
strategies
for
characterization
by
emphasis
on
collection,
data
Data
processing
visualization
methods
are
presented
suggested
workflows
detail
considerations
needed
molecular
information
derived
from
MS.
Finally,
highlight
current
research
gaps,
biases,
future
directions
improve
our
understanding
chemistry
within
terrestrial
ecosystems.
International Journal of Molecular Sciences,
Journal Year:
2020,
Volume and Issue:
22(1), P. 318 - 318
Published: Dec. 30, 2020
C
and
N
are
the
most
important
essential
elements
constituting
organic
compounds
in
plants.
The
shoots
roots
depend
on
each
other
by
exchanging
through
xylem
phloem
transport
systems.
Complex
mechanisms
regulate
metabolism
to
optimize
plant
growth,
agricultural
crop
production,
maintenance
of
agroecosystem.
In
this
paper,
we
cover
recent
advances
understanding
metabolism,
regulation,
plants,
as
well
their
underlying
molecular
mechanisms.
Special
emphasis
is
given
starch
plastids
changes
responses
environmental
stress
that
were
previously
overlooked,
since
these
provide
an
store
fuels
growth.
We
present
general
insights
into
system
biology
approaches
have
expanded
our
core
biological
questions
related
metabolism.
Finally,
review
synthesizes
trade-off
concept
links
status
plant's
response
microorganisms.
Field Crops Research,
Journal Year:
2022,
Volume and Issue:
283, P. 108541 - 108541
Published: April 17, 2022
The
demand
for
nitrogen
(N)
crop
production
increased
rapidly
from
the
middle
of
twentieth
century
and
is
predicted
to
at
least
double
by
2050
satisfy
on-going
improvements
in
productivity
major
food
crops
such
as
wheat,
rice
maize
that
underpin
staple
diet
most
world's
population.
will
need
be
fulfilled
two
main
sources
N
supply
–
biological
(gas)
(N2)
fixation
(BNF)
fertilizer
supplied
through
Haber-Bosch
processes.
BNF
provides
many
functional
benefits
agroecosystems.
It
a
vital
mechanism
replenishing
reservoirs
soil
organic
improving
availability
support
growth
while
also
assisting
efforts
lower
negative
environmental
externalities
than
N.
In
cereal-based
cropping
systems,
legumes
symbiosis
with
rhizobia
contribute
largest
input;
however,
diazotrophs
involved
non-symbiotic
associations
plants
or
present
free-living
N2-fixers
are
ubiquitous
provide
an
additional
source
fixed
This
review
presents
current
knowledge
free-living,
symbiotic
global
cycle,
examines
regional
estimates
contributions
BNF,
discusses
possible
strategies
enhance
prospective
benefit
cereal
nutrition.
We
conclude
considering
challenges
introducing
planta
into
cereals
reflect
on
potential
both
conventional
alternative
management
systems
encourage
ecological
intensification
legume
production.