Identification and prediction of molecular factors associated with ischemic stroke: an integrative analysis of DEGs, TFs, and PPI networks DOI Open Access
Mehran Radak, Hossein Fallahi

In vitro models, Journal Year: 2023, Volume and Issue: 2(6), P. 307 - 315

Published: Dec. 7, 2023

Language: Английский

Exploring neuroprotective effects of PP2 in ischemic stroke via bioinformatics and experimental validation DOI

Shiyan Zhao,

Jun Lu, Yanyan Zhao

et al.

Neurological Research, Journal Year: 2025, Volume and Issue: unknown, P. 1 - 12

Published: May 12, 2025

Ischemic stroke is a leading cause of mortality and disability worldwide, yet effective therapeutic options remain limited. In this study, bioinformatics analyses were used to identify potential targets small-molecule compounds for ischemic stroke. A mouse model cerebral ischemia was subsequently validate their neuroprotective efficacy. Bioinformatics methods analyze key signaling pathways hub genes associated with Additionally, the Connectivity Map (CMap) database queried treatment. Finally, middle artery occlusion/reperfusion (MCAO/R) employed further evaluate effects identified compounds. GO KEGG pathway enrichment revealed that such as TNF, NF-κB, IL-17 play crucial roles in PPI network analysis five genes-IL-1β, IL-6, ICAM-1, Jun, Fos-all closely neuroinflammatory responses. The compound PP2, selective Src kinase inhibitor, by CMap database. MCAO/R model, PP2 exhibited significant effects. It reduced infarct volume brain edema improved neurological function. Mechanistically, inhibited phosphorylation, thereby suppressing NF-κB reducing levels pro-inflammatory cytokines, including TNF-α, IL-1β, IL-6. This study identifies promising target highlights value drug discovery mechanistic research.

Language: Английский

Citations

0

Exosomal circCNOT6L Regulates Astrocyte Apoptotic Signals Induced by Hypoxia Exposure Through miR99a-5p/SERPINE1 and Alleviates Ischemic Stroke Injury DOI
Wanting He,

Lian Gu,

Jialei Yang

et al.

Molecular Neurobiology, Journal Year: 2023, Volume and Issue: 60(12), P. 7118 - 7135

Published: Aug. 2, 2023

Language: Английский

Citations

9

Circulating circular RNAs as novel biomarkers and functional prediction for the early diagnosis in post-stroke cognitive impairment: A single-center prospective study in China DOI
Chen Chen, Qingxiang Liu, Jianfei Wang

et al.

Journal of Stroke and Cerebrovascular Diseases, Journal Year: 2024, Volume and Issue: 33(11), P. 107945 - 107945

Published: Aug. 29, 2024

Language: Английский

Citations

3

Circular RNAs: Promising Treatment Targets and Biomarkers of Ischemic Stroke DOI Open Access
Guangchen Xu, Ge Liu, Ziyu Wang

et al.

International Journal of Molecular Sciences, Journal Year: 2023, Volume and Issue: 25(1), P. 178 - 178

Published: Dec. 22, 2023

Ischemic stroke is one of the most significant causes morbidity and mortality worldwide. However, there a dearth effective drugs treatment methods for ischemic stroke. Significant numbers circular RNAs (circRNAs) exhibit abnormal expression following are considered potential therapeutic targets. CircRNAs have emerged as promising biomarkers due to their stable in peripheral blood significance diagnosis prognosis. This review provides summary 31 circRNAs involved pathophysiological processes apoptosis, autophagy, inflammation, oxidative stress, angiogenesis Furthermore, we discuss mechanisms action said clinical applications. Ultimately, promise both targets

Language: Английский

Citations

6

Expression profiling and bioinformatics analysis of serum exosomal circular RNAs in lymph node metastasis of papillary thyroid carcinoma DOI Open Access
Huiyong Peng,

Zhangwei Zhu,

Jie Xing

et al.

Journal of Biomedical Research, Journal Year: 2024, Volume and Issue: 38, P. 1 - 1

Published: Jan. 1, 2024

Most papillary thyroid carcinoma (PTC) patients have a good prognosis, but lymph node metastasis (LNM) is the most common progressive manifestation and often leads to poor-prognosis. However, few studies focused on underlying mechanisms of LNM. This study aimed identity potential role exosomal circRNAs that contribute LNM in PTC. We found 9000 aberrantly expressed PTC with LNM, including 684 observably upregulation 2193 notably downregulation. Functional enrichment analyses indicated these were mainly enriched variety molecules signaling pathways related progression Bioinformatics analysis screened 14 circRNA-miRNA-mRNA networks associated LNM-related Moreover, circTACC2-miR-7-EGFR circBIRC6-miR-24-3p-BCL2L11 axes verified for involvement Additionally, 4 upregulated circRNAs-related hub genes 8 downregulated screened, some which involved through verification. Collectively, our data provided novel framework in-depth investigation function dysregulated their biomarkers

Language: Английский

Citations

2

A Novel Perspective on Ischemic Stroke: A Review of Exosome and Noncoding RNA Studies DOI Creative Commons
Qianwen Wang, Yuhui Chen, Ling‐bing Meng

et al.

Brain Sciences, Journal Year: 2022, Volume and Issue: 12(8), P. 1000 - 1000

Published: July 28, 2022

Ischemic stroke is a life-threatening condition that also frequently results in long-term disability. Currently, intravenous thrombolysis with tissue plasminogen activator and mechanical thrombectomy the most popular treatment. However, narrow time window related complications limit treatment benefits. Exosomes have recently emerged as ideal therapeutic candidates for ischemic ability to pass through blood_brain barrier mediate intercellular communication, addition, exosomes their contents can be bioengineered implement targeted delivery. In last two decades, exosomal noncoding RNAs been found involved pathophysiological progression of stroke, including atherosclerosis, apoptosis, inflammation, oxidative stress, neurovascular remodeling. this review, we describe latest progress regarding role long circular occurrence, progression, recovery stroke. Exploration correlated effects may facilitate accurate diagnosis, they serve new targets disease.

Language: Английский

Citations

9

APOA2: New Target for Molecular Hydrogen Therapy in Sepsis-Related Lung Injury Based on Proteomic and Genomic Analysis DOI Open Access
Yuanlin Wang,

Yan Fan,

Yi Jiang

et al.

International Journal of Molecular Sciences, Journal Year: 2023, Volume and Issue: 24(14), P. 11325 - 11325

Published: July 11, 2023

Target biomarkers for H2 at both the protein and genome levels are still unclear. In this study, quantitative proteomics acquired from a mouse model were first analyzed. At same time, functional pathway analysis helped identify pathways level. Then, bioinformatics on mRNA sequencing data conducted between sepsis normal models. Differential expressional genes with closest relationship to disease status development identified through module correlation analysis. common in transcriptomics extracted as target biomarkers. Through analyzing expression trait locus (eQTL) genome-wide association studies (GWAS), colocalization Apoa2 phenotype was by summary-data-based Mendelian randomization (SMR). two-sample drug-target, syndrome (MR) analyses all using Twosample R package. For level, loci (pQTLs) of biomarker also included MR. Animal experiments validate these results. As result, or protective, causal sepsis. HDL type 2 diabetes proven possess relationships The agitation inhibition indicated influence related syndromes. conclusion, we proposed treatment.

Language: Английский

Citations

4

Clinical Application of Circular RNAs as Biomarkers in Acute Ischemic Stroke DOI Open Access
Chiara Siracusa, Niccolò Vono, Maria Benedetta Morano

et al.

Journal of Personalized Medicine, Journal Year: 2023, Volume and Issue: 13(5), P. 839 - 839

Published: May 16, 2023

Despite the substantial improvement in diagnosis and treatment within last decades, ischemic stroke still represents a challenge, responsible for high burden of morbidity mortality. Among unmet clinical needs are difficulties identifying those subjects with greatest risk developing stroke, challenges obtaining timely diagnosis, prompt recognition different forms assessment response to treatments prognostic assessment. All these issues might be improved appropriate smart biomarkers that could better inform management. The present article offers an overview potential role circular RNAs as disease stroke. A systematic approach was adopted gather all potentially relevant information order provide panoramic view on this class promising molecules.

Language: Английский

Citations

3

Exosomes and lipid metabolism in metabolic and cardiovascular disorders DOI

Zina Zein Abdin,

Apple Geng, Mark Chandy

et al.

Current Opinion in Lipidology, Journal Year: 2023, Volume and Issue: 34(2), P. 82 - 91

Published: March 2, 2023

Exosomes are lipid-bound particles that carry lipids, protein, and nucleic acid affect cellular function. This review highlights the current knowledge on crosstalk between exosomes lipid metabolism their impact cardiometabolic disease.Recent studies revealed lipids metabolizing enzymes important for exosome biogenesis internalization conversely how metabolism, secretion, degradation. The interplay affects disease pathophysiology. More importantly, might function as biomarkers diagnosis prognosis or possibly therapies.Recent advances in our understanding of have implications normal physiological functions well pathogenesis. Exosome novel diagnostic tests treatments disease.

Language: Английский

Citations

2

Exosomes as biomarkers and therapeutic measures for ischemic stroke DOI

Yun Shi,

Ruirui Wang, Lei Wang

et al.

European Journal of Pharmacology, Journal Year: 2022, Volume and Issue: 939, P. 175477 - 175477

Published: Dec. 18, 2022

Language: Английский

Citations

3