Structural Bioinformatics Applied to Acetylcholinesterase Enzyme Inhibition DOI Open Access

María Fernanda Reynoso-García,

D. Nicolas, Aldo Y. Tenorio-Barajas

et al.

International Journal of Molecular Sciences, Journal Year: 2025, Volume and Issue: 26(8), P. 3781 - 3781

Published: April 17, 2025

Acetylcholinesterase (AChE) is a critical enzyme involved in neurotransmission by hydrolyzing acetylcholine at the synaptic cleft, making it key target for drug discovery, particularly treatment of neurodegenerative disorders such as Alzheimer’s disease. Computational approaches, molecular docking and dynamics (MD) simulations, have become indispensable tools identifying optimizing AChE inhibitors predicting ligand-binding affinities, interaction mechanisms, conformational dynamics. This review serves comprehensive guide future research on using MD simulations. It compiles analyzes studies conducted over past five years, providing evaluation most widely used computational tools, including AutoDock, AutoDock Vina, GROMACS, which significantly contributed to advancement inhibitor screening. Furthermore, we identify PDB ID: 4EY7, frequently crystal structure studies, highlight Donepezil, well-established reference molecule employed control screening novel inhibitors. By examining these aspects, this aims enhance accuracy reliability virtual approaches researchers selecting appropriate methodologies. The integration simulations not only improves hit identification lead optimization but also provides deeper mechanistic insights into AChE–ligand interactions, contributing rational design more effective

Language: Английский

Exploration of 1,2,3-triazole linked benzenesulfonamide derivatives as isoform selective inhibitors of human carbonic anhydrase DOI Open Access

Chnar Kakakhan,

Cüneyt Türkeş, Özcan Güleç

et al.

Bioorganic & Medicinal Chemistry, Journal Year: 2022, Volume and Issue: 77, P. 117111 - 117111

Published: Nov. 29, 2022

Language: Английский

Citations

81

Discovery of novel benzenesulfonamides incorporating 1,2,3-triazole scaffold as carbonic anhydrase I, II, IX, and XII inhibitors DOI

Aida Buza,

Cüneyt Türkeş, Mustafa Arslan

et al.

International Journal of Biological Macromolecules, Journal Year: 2023, Volume and Issue: 239, P. 124232 - 124232

Published: March 29, 2023

Language: Английский

Citations

68

Novel beta-lactam substituted benzenesulfonamides: in vitro enzyme inhibition, cytotoxic activity and in silico interactions DOI
Özcan Güleç, Cüneyt Türkeş, Mustafa Arslan

et al.

Journal of Biomolecular Structure and Dynamics, Journal Year: 2023, Volume and Issue: 42(12), P. 6359 - 6377

Published: Aug. 4, 2023

In this study, a library of twelve beta-lactam-substituted benzenesulfonamides (

Language: Английский

Citations

55

Bioactivity, cytotoxicity, and molecular modeling studies of novel sulfonamides as dual inhibitors of carbonic anhydrases and acetylcholinesterase DOI
Özcan Güleç, Cüneyt Türkeş, Mustafa Arslan

et al.

Journal of Molecular Liquids, Journal Year: 2024, Volume and Issue: 410, P. 125558 - 125558

Published: July 18, 2024

Language: Английский

Citations

26

Enzyme inhibition, molecular docking, and density functional theory studies of new thiosemicarbazones incorporating the 4‐hydroxy‐3,5‐dimethoxy benzaldehyde motif DOI
Yeliz Demir, Cüneyt Türkeş, M. Serdar Çavuş

et al.

Archiv der Pharmazie, Journal Year: 2022, Volume and Issue: 356(4)

Published: Dec. 27, 2022

New Schiff base-bearing thiosemicarbazones (1-13) were obtained from 4-hydroxy-3,5-dimethoxy benzaldehyde and various isocyanates. The structures of the synthesized molecules elucidated in detail. Density functional theory calculations also performed to determine spectroscopic properties compounds. Moreover, enzyme inhibition activities these compounds investigated. They showed highly potent effects on acetylcholinesterase (AChE) human carbonic anhydrases (hCAs) (KI values are range 51.11 ± 6.01 278.10 40.55 nM, 60.32 9.78 300.00 77.41 64.21 9.99 307.70 61.35 nM for AChE, hCA I, II, respectively). In addition, molecular docking studies performed, confirmed by binding affinities most derivatives.

Language: Английский

Citations

42

Novel acetic acid derivatives containing quinazolin‐4(3H)‐one ring: Synthesis, in vitro, and in silico evaluation of potent aldose reductase inhibitors DOI
Feyzi Sinan Tokalı, Yeliz Demir, Cüneyt Türkeş

et al.

Drug Development Research, Journal Year: 2023, Volume and Issue: 84(2), P. 275 - 295

Published: Jan. 4, 2023

Abstract Aldose reductase (AR) is a crucial enzyme of the polyol pathway through which glucose metabolized under conditions hyperglycemia related to diabetes. A series novel acetic acid derivatives containing quinazolin‐4(3 H )‐one ring ( 1–22 ) was synthesized and tested for in vitro AR inhibitory effect. All target compounds exhibited nanomolar activity against enzyme, all displayed higher as compared reference drug epalrestat. Among them, Compound 19 , named 2‐(4‐[(2‐[(4‐methylpiperazin‐1‐yl)methyl]‐4‐oxoquinazolin‐3(4 )‐ylimino)methyl]phenoxy)acetic acid, strongest effect with K I value 61.20 ± 10.18 nM. Additionally, these were investigated L929, nontumoral fibroblast cells, MCF‐7, breast cancer cells using MTT assay. Compounds 16 showed lower toxicity normal L929 cells. The compounds’ absorption, distribution, metabolism, excretion properties also evaluated. Molecular docking simulations used look into possible binding mechanisms inhibitors AR.

Language: Английский

Citations

40

A novel series of thiosemicarbazone hybrid scaffolds: Design, synthesis, DFT studies, metabolic enzyme inhibition properties, and molecular docking calculations DOI
Hasan Yakan, Halit Muğlu, Cüneyt Türkeş

et al.

Journal of Molecular Structure, Journal Year: 2023, Volume and Issue: 1280, P. 135077 - 135077

Published: Feb. 1, 2023

Language: Английский

Citations

29

Dynamics of small molecule-enzyme interactions: Novel benzenesulfonamides as multi-target agents endowed with inhibitory effects against some metabolic enzymes DOI
Özcan Güleç, Cüneyt Türkeş, Mustafa Arslan

et al.

Archives of Biochemistry and Biophysics, Journal Year: 2024, Volume and Issue: 759, P. 110099 - 110099

Published: July 14, 2024

Language: Английский

Citations

15

Phenolic Content Analysis of Two Species Belonging to the Lamiaceae Family: Antioxidant, Anticholinergic, and Antibacterial Activities DOI Creative Commons
A.R. Ndhlala, Mesut Işık, Arzu Kavaz Yüksel

et al.

Molecules, Journal Year: 2024, Volume and Issue: 29(2), P. 480 - 480

Published: Jan. 18, 2024

The Lamiaceae family are utilized as ornamental, medicinal, and food supplements throughout the world. current study focuses on a comparative analysis of phenolic compositions bioactivities (including antioxidant, anticholinergic, antibacterial activities) ethanolic extracts derived from aerial parts two species (Lavandula stoechas L. Thymus sipyleus Boiss). presence compounds phytochemicals in plant was identified using LC-MS/MS technique. revealed that vanillic acid (125,596.66 µg/L) most abundant phytochemical stoechas. Kaempferol (8550.52 substance sipyleus. assessment antioxidant efficacy conducted DPPH (2.2-diphenyl-1-picryl-hydrazyl-hydrate), ABTS (2.2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid)), Fe3+–Fe2+ reducing, CUPRAC (Cu2+–Cu+ reducing) assays. anticholinergic activity samples determined acetylcholinesterase (AChE) inhibition assay. results were higher T. than ethanol extracts. exhibited radical scavenging ranging 15 to 18%, while had effects 34% 38%. AChE potential for IC50 values 0.221 ± 0.01 mg/mL 0.067 0.02 mg/mL, respectively. these against pathogenic bacteria isolates MIC (minimal inhibitory concentration) method. These findings indicated possess be natural antioxidants realm preservation. Additionally, their antimicrobial properties suggest therapeutic utility management certain diseases.

Language: Английский

Citations

7

Antioxidant and anti-inflammatory activity through inhibition of NF-κB and sEH of some citrus peel and phytoconstituent characteristics DOI Creative Commons
Yesi Desmiaty, Ni Made Dwi Sandhiutami, Esti Mulatsari

et al.

Saudi Pharmaceutical Journal, Journal Year: 2024, Volume and Issue: 32(2), P. 101959 - 101959

Published: Jan. 21, 2024

In Indonesia, there are many types of citrus where parts the fruit, leaves, and peel can be utilized as food, drinks, spices, medicine. This research aims to determine phytochemical characteristics, antioxidant activities, anti-inflammatory activity through inhibition NF-κB sEH, main phytoconstituents three fruits that commonly used herbs in Indonesia. The flesh

Language: Английский

Citations

7