Research Square (Research Square),
Journal Year:
2022,
Volume and Issue:
unknown
Published: Aug. 16, 2022
Abstract
The
impact
of
climate
change
on
biodiversity
needs
to
be
understood
from
a
multidisciplinary
approach.
Using
an
analytical
framework,
we
investigate
the
species
response
rising
temperatures.
Common
traits
and
characteristics
among
that
allow
classification
at
different
taxonomic
levels
imply
underlying
symmetry
gives
rise
invariances
behind
observed
in
nature.
Changing
temperatures
go
beyond
critical
limit
break
this
which
could
lead
enhanced
speciation.
Plants,
Journal Year:
2025,
Volume and Issue:
14(7), P. 1094 - 1094
Published: April 1, 2025
Understanding
ecological
niche
evolution
patterns
is
crucial
for
elucidating
biogeographic
history
and
guiding
biodiversity
conservation.
Taxus
a
Tertiary
relict
gymnosperm
with
11
lineages
mainly
distributed
across
East
Asia,
spanning
from
tropical
to
subarctic
regions.
However,
the
spatiotemporal
dynamics
of
its
roles
geographical
factors
in
lineage
diversification,
remain
unclear.
Using
occurrence
records,
environmental
data,
reconstructed
phylogenies,
we
employed
ensemble
models
(eENMs),
principle
components
analysis
(PCA-env),
phyloclimatic
modeling
analyze
similarity
among
lineages.
Based
on
Bayesian
trees
distribution
characteristics,
classified
eleven
into
four
clades:
Northern
(T.
cuspidata),
Central
chinensis,
T.
qinlingensis,
Emei
type),
Western
wallichiana,
florinii,
contorta),
Southern
calcicola,
phytonii,
mairei,
Huangshan
type).
Orogenic
activities
climate
changes
Tibetan
Plateau
since
Late
Miocene
likely
facilitated
local
adaptation
ancestral
populations
China,
Hengduan
Mountains,
Yunnan-Guizhou
Plateau,
driving
their
expansion
diversification
towards
west
south.
Key
variables,
including
extreme
temperature,
temperature
precipitation
variability,
light,
altitude,
were
identified
as
major
drivers
current
divergence.
Both
conservatism
divergence
observed,
early
followed
by
recent
The
clade
exhibits
high
heat
moisture
tolerance,
suggesting
an
adaptive
shift,
while
clades
retain
drought
cold
displaying
significant
phylogenetic
(PNC).
We
recommend
prioritizing
conservation
which
highest
PNC
level,
particularly
Qinling,
Daba,
Taihang
are
highly
degraded
vulnerable
future
fluctuations.
Journal of Biogeography,
Journal Year:
2021,
Volume and Issue:
48(11), P. 2865 - 2876
Published: Sept. 8, 2021
Abstract
Aim
Understanding
the
degree
to
which
closely
related
taxa
diverge
in
their
niche
traits
could
provide
insight
on
evolutionary
patterns,
as
well
shed
some
light
mechanisms
underpinning
broad‐scale
biogeographic
patterns.
The
evolution
of
ticks
was
thought
be
driven
by
hosts.
However,
recent
evidence
suggests
that
tick
is
more
likely
habitat
conditions.
Amblyomma
maculatum
group
provides
a
good
example
test
former,
its
incipient
speciation
raises
possibility
very
rapid
adaptation
slightly
different
environments.
Location
Americas.
Taxa
Ticks
from
Koch,
1844
(Acari:
Ixodidae)
(
A
.
tigrinum
,
triste
s.s.,
s.s.
and
two
intermediate
morphs).
Methods
We
addressed
question
whether
differentiation
within
this
results
ecological
factors,
either
maintaining
similar
(conservatism)
or
occupying
distinct
niches
(divergence).
analysed
distribution
each
morphotype
with
models.
Next,
we
explored
these
inhabit
environments
are
than
expected
comparing
overlap
environmental
space.
Results
found
for
differentiation,
showing
members
exist
respond
aspects
environments,
leading
geographical
variation.
Main
conclusions
analysis
indicates
conservatism
pairs
—
s.s.—
s.s,
traditionally
associated
allopatric
speciation;
while
divergence
suggested
remaining
comparisons.
These
findings
add
additional
study
ticks,
giving
support
hypothesis
conditions
driving
no
strict
host
specificity.
Journal of Biogeography,
Journal Year:
2024,
Volume and Issue:
51(7), P. 1213 - 1229
Published: Feb. 22, 2024
Abstract
Aim
Due
to
its
complex
biogeographical
and
ecological
history,
the
seasonally
dry
forests
(SDF)
of
Mesoamerica
are
considered
a
biodiversity
hotspot.
SDF
currently
distributed
in
relatively
large
continuous,
but
isolated
areas,
which
there
both
high
total
endemic
species
numbers.
Among
birds,
few
shared
across
patches;
other
one
these;
for
two
patch,
fossils
have
been
recovered
different
one,
suggesting
former
widespread
distribution
so
species,
implying
that
current
distributional
patterns
probably
recent.
Location
Mesoamerican
forests.
Methods
We
assessed
role
niche
divergence/conservatism
evolution
bird
patterns.
Using
an
modelling
approach,
we
estimated
palaeodistributions
Yucatan
Peninsula
(YP),
Pacific
Slope
(MPS)
with
fossil
record
YP
more
showing
allopatric
pattern.
For
comparison,
simulated
virtual
(VS)
matching
each
pattern,
assuming
they
represent
expected
patch.
To
test
hypothesis
conservatism,
equivalence/similarity
between
patches
represented
by
VS,
VS
counterpart.
Results
Our
results
showed
three
patterns:
(i)
no
past
geographical
connectiveness
among
suitable
areas;
(ii)
not
equivalence,
despite
low
overlap
distance;
(iii)
potential
divergence.
Main
Conclusions
birds
MPS,
our
suggest
absence
from
may
be
attributed
loss
their
environmental
niche.
Widespread
either
conservatism
or
endemics
underline
avifauna.
BMC Plant Biology,
Journal Year:
2024,
Volume and Issue:
24(1)
Published: July 11, 2024
Abstract
Background
The
taxonomy
of
Taxus
Linn.
remains
controversial
due
to
its
continuous
phenotypic
variation
and
unstable
topology,
thus
adversely
affecting
the
formulation
scientific
conservation
strategies
for
this
genus.
Recently,
a
new
ecotype,
known
as
Qinling
type
,
is
mainly
distributed
in
Mountains
belongs
monophyletic
group.
Here,
we
employed
multiple
methods
including
leaf
phenotype
comparison
(leaf
shapes
microstructure),
DNA
barcoding
identification
(ITS
+
trn
L
-trn
F
rbc
L),
niche
analysis
ascertain
taxonomic
status
.
Results
Multiple
comparisons
revealed
significant
differences
morphological
characters
(length,
width,
length/width
ratio)
among
other
species.
Leaf
anatomical
indicated
that
only
T.
cuspidata
had
no
papilla
under
midvein
or
tannins
epicuticle.
Phylogenetic
belonged
Moreover,
formed
relatively
independent
niche,
it
was
around
Mountains,
Ta-pa
Taihang
situated
at
an
elevation
below
1500
m.
Conclusions
Four
characters,
namely
curvature,
margin
taper,
papillation
on
midvein,
edges
were
put
forward
primary
indexes
distinguishing
ecotype
Qingling
represented
evolutionary
lineage
unique
ecological
niche.
Therefore,
suggested
should
be
treated
novel
species
named
qinlingensis
Y.
F.
Wen
&
X.
Wu,
sp.
nov.
BMC Ecology and Evolution,
Journal Year:
2025,
Volume and Issue:
25(1)
Published: April 16, 2025
The
topographic
complexity
and
wide
range
of
environmental
conditions
the
Neotropical
region
have
allowed
evolution
most
diverse
avifauna
in
world.
Distributional
patterns
within
this
avian
diversity
mirror
complexity,
many
species
show
allopatric
distributions
environmentally
continuous
regions.
Here,
we
used
variables
historical
presence
records
to
understand
distribution
three
isolated
groups
(Gulf,
Pacific,
Yucatan
Peninsula)
Olive
Sparrow
(Arremonops
rufivirgatus)
complex.
We
assessed
role
factors
underlying
geographic
complex
based
on
ecological
niche
modeling
performed
paleoclimatic
reconstructions
assess
distributional
changes
suitable
areas
during
Late
Pleistocene.
Niche
similarity
was
not
rejected
Pacific/Yucatan
comparison,
but
Gulf/Pacific
Gulf/Yucatan
comparisons
showed
differentiation.
found
regions
with
low
climatic
suitability
representing
a
biogeographic
barrier
for
Pacific
groups,
Gulf
suggesting
that
biotic
factors,
such
as
competition
ecologically
similar
species,
may
be
involved
isolation.
Our
results
suggest
A.
rufivirgatus
probably
evolved
due
interactions
relatively
across
Slope,
contractions
leading
isolation
groups.
Biological Journal of the Linnean Society,
Journal Year:
2020,
Volume and Issue:
132(4), P. 741 - 758
Published: Nov. 24, 2020
Abstract
We
analysed
the
phylogeographic
structure
of
five
resident
bird
lineages
distributed
in
seasonally
dry
tropical
forests
(SDTF)
Mesoamerica
to
test
whether
they
show
patterns
synchronous
and
geographically
coincident
genetic
divergence
during
Quaternary.
generated
phylogenetic
trees,
estimated
times
populations
(based
on
sequences
mitochondrial
genes),
as
well
estimating
historical
distributions
(range
extension
areas
long-term
climate
stability)
Late
Pleistocene.
tested
selected
scenarios
that
best
explain
current
taxa
using
Approximate
Bayesian
Computation
(ABC)
approach.
For
most
species,
trees
haplotype
networks
showed
a
clear
associated
with
geographical
distribution.
Overall,
ranged
from
0.29–2.0
Mya,
suggesting
diversification
occurred
at
different
The
palaeodistribution
models
predicted
least
two
climatic
stability
within
SDTF
probably
allowed
glacial-interglacial
persistence
isolated
along
Mexican
Pacific,
thus
promoting
their
divergence.
results
provide
information
relevant
identification
hotspots
for
Mesoamerican
avifauna.
Journal of Biogeography,
Journal Year:
2022,
Volume and Issue:
49(7), P. 1260 - 1273
Published: May 5, 2022
Abstract
Aim
Continental
evolutionary
radiations
provide
opportunities
to
understand
how
landscape
evolution
and
biotic
factors
interact
generate
species
diversity.
Additionally,
understanding
whether
diversification
dynamics
differ
between
montane
lowland
environments
is
a
long‐standing
question
with
few
comparative
analyses
in
the
Neotropics.
To
address
these
questions,
we
investigated
biogeographical
patterns
processes
underlying
of
songbird
genus,
compared
clades
occurring
Neotropical
habitats.
Location
forests.
Taxon
Arremon
(Aves:
Passerellidae).
Methods
We
sequenced
genomic
data
(ultra‐conserved
elements,
UCEs)
92
individuals
(including
historical
skin
specimens)
comprising
47
50
currently
recognized
subspecies
genus
collected
habitat
association
(1)
build
most
complete
phylogenetic
hypothesis
for
date
using
maximum
likelihood
Bayesian
methods
concatenated
matrix,
multi‐species
coalescent
method
based
on
quartets;
(2)
reconstruct
their
ancestral
ranges,
rates.
Results
All
recovered
essentially
same
topology
strong
support
values
interspecific
nodes
revealing
relationships
among
species.
found
evidence
humid
range
Central
America
late
Miocene
later
expansion
into
lowlands
America,
as
well
mountains
South
America.
Despite
some
temporal
variation
rate,
overall
similar
clades.
Main
conclusion
Species
diversity
within
likely
underestimated
by
current
taxonomic
arrangement.
The
colonization
dry
forests,
across
may
have
provided
new
geographical
ecological
speciation
resulting
high
diversification.
Overall
were
comparable
clades,
contrasting
previous
studies
focused
such
comparisons
birds.
Ecology and Evolution,
Journal Year:
2021,
Volume and Issue:
11(15), P. 10353 - 10368
Published: July 1, 2021
Abstract
The
studies
of
climatic‐niche
shifts
over
evolutionary
time
accompanied
by
key
morphological
innovations
have
attracted
the
interest
many
researchers
recently.
We
applied
ecological
niche
models
(ENMs),
ordination
method
(environment
principal
component
analyses;
PCA‐env),
combined
phylogenetic
comparative
methods
(PCMs),
and
generalized
least
squares
(PGLS)
regression
to
analyze
realized
dynamics
correspondingly
across
clades
within
Scutiger
boulengeri
throughout
their
distributions
in
Qinghai–Tibet
Plateau
(QTP)
margins
China.
Our
results
show
there
are
six
S.
obvious
divergences
caused
expansion
three
clades.
Moreover,
our
system,
is
more
popular
than
unfilling
into
novel
environmental
conditions.
Annual
mean
temperature,
annual
precipitation,
precipitation
driest
month
may
contribute
such
a
shift.
In
addition,
we
identified
several
climatic
factors
traits
that
tend
be
associated
with
correspondingly.
found
phenotypic
plasticity
[i.e.,
length
lower
arm
hand
(LAHL),
hind‐limb
(HLL),
foot
(FL)]
changes
snout–vent
(SVL)]
together
toward
adapting
niche,
which
provides
us
potential
pattern
how
colonizing
toad
might
seed
habitat
begin
process
speciation
finally
adaptive
radiation.
For
these
reasons,
persistent
phylogeographic
divisions
accompanying
occupancy
adaption
suggest
for
future
studies,
distinct
genetic
structure
corresponding
each
clade
should
included
modeling
evolution
dynamics,
but
not
just
constructed
at
species
level.