Revised taxon definition in European Cortinarius subgenus Dermocybe based on phylogeny, chemotaxonomy, and morphology DOI Creative Commons
Lesley Huymann,

Anna Hannecker,

Turrini Giovanni

et al.

Mycological Progress, Journal Year: 2024, Volume and Issue: 23(1)

Published: April 5, 2024

Abstract Cortinarius (Fr.) Fr. is one of the most species-rich genera in Agaricales ( Basidiomycota ). subgen. Dermocybe Trog includes brightly coloured Cortinarii with anthraquinone pigments. The chemotaxonomic approach has always been as important classical methods for species definition and helped to improve overall concepts. However, some concepts within this group remain unclear. We therefore address topic based on a combined phylogenetic, morphological, pigment-chemical approach. For this, sequence data, HPLC–MS pigment profiles spore sizes were included obtain better resolution taxa. study was 173 recent collections 12 type specimens. A total 117 rDNA ITS sequences produced from study, 102 retrieved databases. could detect clearly delimit 19 occurring central European habitats, which 16 are discussed detail. Additionally, we grouped detected pigments into four groups. This detailed analysis dermocyboid restricted number habitat types confirmed our hypothesis that diversity much higher than currently assumed. high blurred by too wide incorrect several like C. croceus cinnamomeus . Molecular chemotaxonomical studies carried out together careful phenotypical analyses resulted good differentiation species. key presented these taxa allow identification subgenus spp. Central Europe mainly alpine range.

Language: Английский

The numbers of fungi: are the most speciose genera truly diverse? DOI
Chitrabhanu S. Bhunjun, Tuula Niskanen, Nakarin Suwannarach

et al.

Fungal Diversity, Journal Year: 2022, Volume and Issue: 114(1), P. 387 - 462

Published: March 27, 2022

Language: Английский

Citations

123

Pushing the Frontiers of Biodiversity Research: Unveiling the Global Diversity, Distribution, and Conservation of Fungi DOI Open Access
Tuula Niskanen, Robert Lücking, Anders Dahlberg

et al.

Annual Review of Environment and Resources, Journal Year: 2023, Volume and Issue: 48(1), P. 149 - 176

Published: Sept. 18, 2023

Fungi comprise approximately 20% of all eukaryotic species and are connected to virtually life forms on Earth. Yet, their diversity remains contentious, distribution elusive, conservation neglected. We aim flip this situation by synthesizing current knowledge. present a revised estimate 2–3 million fungal with “best estimate” at 2.5 million. To name the unknown >90% these end century, we propose recognition known only from DNA data call for large-scale sampling campaigns. an updated global map richness, highlighting tropical temperate ecoregions high diversity. further Red List assessments enhanced management guidelines aid conservation. Given that fungi play inseparable role in our lives ecosystems, considering fascinating questions remaining be answered, argue constitute next frontier biodiversity research.

Language: Английский

Citations

82

Fungal diversity notes 1717–1817: taxonomic and phylogenetic contributions on genera and species of fungal taxa DOI
Shi‐Liang Liu, Xuewei Wang, Guojie Li

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 124(1), P. 1 - 216

Published: Feb. 15, 2024

Language: Английский

Citations

39

Phylogenomics, divergence times and notes of orders in Basidiomycota DOI
Mao-Qiang He, Bin Cao, Fei Liu

et al.

Fungal Diversity, Journal Year: 2024, Volume and Issue: 126(1), P. 127 - 406

Published: July 9, 2024

Language: Английский

Citations

20

OMICS and Other Advanced Technologies in Mycological Applications DOI Creative Commons
Nalin N. Wijayawardene, Nattawut Boonyuen, C. B. Ranaweera

et al.

Journal of Fungi, Journal Year: 2023, Volume and Issue: 9(6), P. 688 - 688

Published: June 19, 2023

Fungi play many roles in different ecosystems. The precise identification of fungi is important aspects. Historically, they were identified based on morphological characteristics, but technological advancements such as polymerase chain reaction (PCR) and DNA sequencing now enable more accurate taxonomy, higher-level classifications. However, some species, referred to "dark taxa", lack distinct physical features that makes their challenging. High-throughput metagenomics environmental samples provide a solution identifying new lineages fungi. This paper discusses approaches including PCR amplification rDNA, multi-loci phylogenetic analyses, the importance various omics (large-scale molecular) techniques for understanding fungal applications. use proteomics, transcriptomics, metatranscriptomics, metabolomics, interactomics provides comprehensive These advanced technologies are critical expanding knowledge Kingdom Fungi, its impact food safety security, edible mushrooms foodomics, secondary metabolites, mycotoxin-producing fungi, biomedical therapeutic applications, antifungal drugs drug resistance, data novel development. also highlights exploring from extreme environments understudied areas identify dark taxa.

Language: Английский

Citations

31

Family matters inside the order Agaricales: systematic reorganization and classification of incertae sedis clitocyboid, pleurotoid and tricholomatoid taxa based on an updated 6-gene phylogeny DOI Creative Commons
Alfredo Vizzini, Pablo Alvarado, Giovanni Consiglio

et al.

Studies in Mycology, Journal Year: 2024, Volume and Issue: 107(1), P. 67 - 148

Published: Feb. 1, 2024

The phylogenetic position of several clitocyboid/pleurotoid/tricholomatoid genera previously considered incertae sedis is here resolved using an updated 6-gene dataset Agaricales including newly sequenced lineages and more complete data from those already analyzed before. Results allowed to infer new relationships, propose taxonomic novelties accommodate them, up ten families a suborder. Giacomia (for which species China described) forms monophyletic clade with Melanoleuca ( Melanoleucaceae ) nested inside suborder Pluteineae , together the Pluteaceae Amanitaceae (including Leucocortinarius ), Limnoperdaceae Volvariellaceae . recently described family Asproinocybaceae shown be later synonym Lyophyllaceae (which includes also Omphaliaster Trichocybe within Tricholomatineae Biannulariaceae Callistosporiaceae Clitocybaceae Fayodiaceae Macrocystidiaceae Pseudoclitopilus Entolomataceae Pseudoclitocybaceae Aspropaxillus Omphalinaceae Infundibulicybe Omphalina Paralepistaceae Pseudoomphalinaceae belong delimitation Pleurotineae (= Schizophyllineae discussed revised, accepting five distinct it, viz. Pleurotaceae Cyphellopsidaceae Fistulinaceae Resupinataceae Schizophyllaceae proposed Phyllotopsidineae Sarcomyxineae found encompass Aphroditeolaceae Pterulaceae Phyllotopsidaceae Radulomycetaceae Sarcomyxaceae Tectella Stephanosporaceae all them unrelated (suborder or Typhulaceae Typhulineae ). Xeromphalinaceae encompassing Xeromphalina Heimiomyces Marasmiineae Hygrophorineae reorganized into Hygrophoraceae Cantharellulaceae Cuphophyllaceae Hygrocybaceae Lichenomphaliaceae homogenize rank main clades suborders Finally, genus Hygrophorocybe represent combination H. carolinensis proposed.

Language: Английский

Citations

11

Systematic arrangement within the family Clitocybaceae (Tricholomatineae, Agaricales): phylogenetic and phylogenomic evidence, morphological data and muscarine-producing innovation DOI
Zheng‐Mi He, Zuohong Chen, Tolgor Bau

et al.

Fungal Diversity, Journal Year: 2023, Volume and Issue: 123(1), P. 1 - 47

Published: Nov. 1, 2023

Language: Английский

Citations

13

A revised phylogeny of Boletaceae using whole genome sequences DOI
Keaton Tremble, Terry W. Henkel, Alexander J. Bradshaw

et al.

Mycologia, Journal Year: 2024, Volume and Issue: 116(3), P. 392 - 408

Published: March 29, 2024

The porcini mushroom family Boletaceae is a diverse, widespread group of ectomycorrhizal (ECM) mushroom-forming fungi that so far has eluded intrafamilial phylogenetic resolution based on morphology and multilocus data sets. In this study, we present genome-wide molecular set 1764 single-copy gene families from global sampling 418 specimens. resulting analysis strong statistical support for most branches the tree, including first statistically robust backbone. enigmatic Phylloboletellus chloephorus non-ECM Argentinian subtropical forests was recovered as new subfamily sister to core Boletaceae. Time-calibrated branch lengths estimate arose in early mid-Cretaceous underwent rapid radiation Eocene, possibly when ECM nutritional mode with emergence diversification angiosperms. Biogeographic reconstructions reveal complex history vicariance episodic long-distance dispersal correlated historical geologic events, Gondwanan origins inferred associated its disarticulation. Together, study represents comprehensively sampled, data-rich phylogeny date, establishing foundation future inferences biogeography group.

Language: Английский

Citations

4

New insights into Cortinarius : Novel taxa from subtropical China DOI Creative Commons
Meng-Le Xie, Yong-Man Yu, Long Pan

et al.

Mycology&#58 An International Journal on Fungal Biology, Journal Year: 2025, Volume and Issue: unknown, P. 1 - 19

Published: Jan. 2, 2025

Cortinarius species are widely distributed in the world and constitute a diverse group of ectomycorrhizal fungi that associated with broad range plant hosts. The diversity this genus has been investigated China, but it remains poorly understood, especially subtropical region. In study, one new section, six novel species, combination, name, record reported from China based on morphological molecular evidences. lilacinicarpus, C. sinocalaisopus, sinosalor, vividus spp. nov., orientisalor nom. illibatus typical section Delibuti. macroflavicapus sp. nov. belongs to Macroflavicapi sect. subgenus Dermocybe. tianbaoyanensis dryadicola comb. belong Spilomei. Detailed descriptions, basidiocarps, microscopic photographs provided for these species. addition, leptospermorum Pauperae Dermocybe is proposed.

Language: Английский

Citations

0

The genus Thaxterogaster (Cortinariaceae): phylogeny and species diversity in Western China DOI Creative Commons

Zi-Rui Wang,

Song-Yan Zhou, Feifei Liu

et al.

Mycology&#58 An International Journal on Fungal Biology, Journal Year: 2025, Volume and Issue: unknown, P. 1 - 39

Published: Feb. 3, 2025

Language: Английский

Citations

0