Perspectives on implementation of eDNA methods in Northeast Atlantic marine monitoring DOI Open Access
Ása Jacobsen, Amanda Vang, Ian Salter

et al.

TemaNord, Journal Year: 2023, Volume and Issue: unknown

Published: June 12, 2023

Key indings: 3 Introduc tion 3.1 Marine monitoring in the Northeast Atlantic 3.2 Application of environmental DNA 3.3 Global and large-scale initiatives 3.4 Nordic 3.5 The UNIFIeD project 4 Survey results discussion 4.1 Background stakeholders researchers 4.2 Perception eDNA as a method for marine 4.3 Standardization status challenges 4.4 Implementation 5 Perspecti ves from workshop 6 Concluding remarks recommen dations

Language: Английский

Marine biodiversity discovery: the metrics of new species descriptions DOI Creative Commons
Philippe Bouchet, Wim Decock,

Britt Lonneville

et al.

Frontiers in Marine Science, Journal Year: 2023, Volume and Issue: 10

Published: June 27, 2023

Based on the World Register of Marine Species (WoRMS), there are currently c. 242,000 known valid marine species living in world's oceans and biota continue to be discovered named steadily at a current average 2,332 new per year. The “average” newly described is benthic crustacean, annelid, or mollusc between 2 10 mm size, tropics depths 0–60 m, represented description by 7–19 specimens. It after shelf life 13.5 years an article with two three authors journal IF <1, published academic institution society small commercial publisher. highly likely that not accompanied molecular data its do work region world where comes from. At pace discovery characterization, it will take several hundred describe remaining 1–2 million unknown species. With increased facilitation access literature, taxonomy increasingly rely retired professionals citizen scientists. barriers descriptions part technological (access habitats difficult sample) educational (training generate use barcodes), but mostly institutional (funding taxonomic work) regulatory (restrictions imposed benefit sharing legislation).

Language: Английский

Citations

24

Survey of automatic plankton image recognition: challenges, existing solutions and future perspectives DOI Creative Commons
Tuomas Eerola, Daniel Batrakhanov,

Nastaran Vatankhah Barazandeh

et al.

Artificial Intelligence Review, Journal Year: 2024, Volume and Issue: 57(5)

Published: April 12, 2024

Abstract Planktonic organisms including phyto-, zoo-, and mixoplankton are key components of aquatic ecosystems respond quickly to changes in the environment, therefore their monitoring is vital follow understand these changes. Advances imaging technology have enabled novel possibilities study plankton populations, but manual classification images time consuming expert-based, making such an approach unsuitable for large-scale application urging automatic solutions analysis, especially recognizing species from images. Despite extensive research done on recognition, latest cutting-edge methods not been widely adopted operational use. In this paper, a comprehensive survey existing recognition presented. First, we identify most notable challenges that make development systems difficult restrict deployment Then, provide detailed description found literature. Finally, propose workflow specific new datasets recommended approaches address them. Many important remain unsolved following: (1) domain shift between hindering instrument independent system, (2) difficulty process previously unseen classes non-plankton particles, (3) uncertainty expert annotations affects training machine learning models. To build harmonized location agnostic purposes should be addressed future research.

Language: Английский

Citations

9

Mind the gap - The need to integrate novel plankton methods alongside ongoing long-term monitoring DOI Creative Commons
Matthew M. Holland, Luis Felipe Artigas, Angus Atkinson

et al.

Ocean & Coastal Management, Journal Year: 2025, Volume and Issue: unknown, P. 107542 - 107542

Published: Jan. 1, 2025

Language: Английский

Citations

1

A conceptual framework to help choose appropriate blue nature-based solutions DOI Creative Commons
Géraldine Pérez, Bethan C. O’Leary, Elena Allegri

et al.

Journal of Environmental Management, Journal Year: 2024, Volume and Issue: 352, P. 119936 - 119936

Published: Jan. 12, 2024

Biodiversity loss and climate change have severely impacted ecosystems livelihoods worldwide, compromising access to food water, increasing disaster risk, affecting human health globally. Nature-based Solutions (NbS) gained interest in addressing these global societal challenges. Although much effort has been directed NbS urban terrestrial environments, the implementation of marine coastal environments (blue NbS) lags. The lack a framework guide decision-makers practitioners through initial planning stages appears be one main obstacles slow blue NbS. To address this, we propose an integrated conceptual framework, built from expert knowledge, inform selection most appropriate based on desired intervention objectives social-ecological context. Our follows four incremental steps structure: Step 1 aims identify challenge(s) address; 2 highlights ecosystem services underlying biodiversity ecological functions that could contribute confronting challenge(s); 3 specific environmental context needs set within (e.g. spatial scale will operate within, ecosystem's vulnerability stressors, its condition); 4 provides potential interventions would help targeted considering defined 3. Designed maintain, enhance, recover, rehabilitate, or create by supporting biodiversity, portfolio includes protection (i.e., fully, highly, lightly, minimally protected areas), restorative activities active, passive, partial restoration; rehabilitation function creation), other management measures enforcement regulation). Ultimately, our guides toward versatile cater each rather than imposing rigid, one-size-fits-all model. In future, this integrate socio-economic considerations more comprehensively kept up-to-date including latest scientific information.

Language: Английский

Citations

6

How many species of Mollusca are there in Brazil? A collective taxonomic effort to reveal this still unknown diversity DOI Creative Commons
Fabrizio M. Machado, Marcel Sabino Miranda, Rodrigo B. Salvador

et al.

Zoologia (Curitiba), Journal Year: 2023, Volume and Issue: 40

Published: Jan. 1, 2023

The expression 'you need to know conserve' is a well-known cliche among biologists. Documenting the richness of group organisms first step towards understanding biodiversity and preparing efficient conservation plans. In this context, many efforts have been made quantify number species on Earth estimate still unknown science. A few countries complete integrated databases estimating approximate recorded for their territory, particularly in Global South. Brazil, country continental dimensions, revealing second most diverse clade invertebrates (=Mollusca) has goal taxonomists. Recently, an unprecedented, collective, effort Brazilian malacologists, it was possible how valid molluscs are there Brazil. effort, more than 30 mollusc experts joined together update Taxonomic Catalogue Fauna (TCBF), governmental website that allows quick real-time updating all Metazoan. So far, 5,000 updates TCBF, indicating presence 3,552 distributed main clades as follows: Caudofoveata (10 spp.), Solenogastres (6 Polyplacophora (35 Scaphopoda (43 Cephalopoda (92 Bivalvia (629 spp.) Gastropoda (2,737 spp.). present study, addition demonstrating time molluscs, also presents state art important phylum highlighting its representative neglected groups.

Language: Английский

Citations

12

eDNA metabarcoding warms up a hotspot of marine biodiversity: revealing underrepresented taxa in visual surveys and historical records from the Gulf of California DOI
Camila Mac Loughlin, Tania Valdivia‐Carrillo, Fausto Valenzuela‐Quiñonez

et al.

Marine Biodiversity, Journal Year: 2024, Volume and Issue: 54(2)

Published: Feb. 23, 2024

Language: Английский

Citations

4

Capacity sharing to protect and restore ecosystems and biodiversity DOI Creative Commons
Frank Müller‐Karger, Aileen Tan Shau Hwai, A. Louise Allcock

et al.

ICES Journal of Marine Science, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 3, 2025

Abstract Challenge 2 of the UN Ocean Decade focuses on protecting and restoring marine ecosystems biodiversity as a fundamental requirement to achieve sustainable development. Addressing this challenge requires reliable timely information ecosystems. To this, academic, government, private groups should engage in process co-design that aims facilitate decision-making at local national level, agree common interoperable practices for collection curation biology ecosystem information. Implementing flow data enable management human activities development will require sharing capacity. An all-hands-on-deck effort help us ensure better future ourselves. A positive step would be identify minimum essential ocean variables can serve multiple relevant regional international frameworks link harmonize required (i.e., including Convention Biological Diversity Kunming-Montreal Global Biodiversity Framework, United Nations Framework Climate Change Paris Agreement, Beyond National Jurisdiction International Seabed Authority, Conservation Antarctic Marine Living Resources, Intergovernmental Science-Policy Platform Ecosystem Services, deep fisheries policies). key strategy is support build existing networks observation. With information, communities nations understand manage how they use life also report progress toward Sustainable Development Goals.

Language: Английский

Citations

0

Marine Pharmacognosy DOI
Mamta Kumari, Piyushkumar Sadhu, Niyati Shah

et al.

Published: March 13, 2025

Marine pharmacognosy is a growing multidisciplinary discipline that investigates the chemical variety of marine creatures and their potential for use as natural sources bioactive chemicals drug development. The unique ecosystem offers vast array compounds with promising pharmacological activities. This chapter explores diverse organisms, including algae, invertebrates, microorganisms, reservoirs pharmacologically products. It cutting-edge techniques utilized in extraction characterization these compounds, highlighting importance bioactivity-guided fractionation. Furthermore, discusses activities demonstrated by marine-derived anticancer, antimicrobial, neuroprotective effects. As field identification novel medicinal it also raises important ecological ethical considerations. sustainable bioprospecting practices to preserve biodiversity considerations, conservation efforts, fair benefit-sharing while harnessing its potential. prospective meet contemporary healthcare concerns involvement development innovative molecules are emphasized, signifying ocean's invaluable contributions human health.

Language: Английский

Citations

0

Contrasting the contributions of 12S eDNA metabarcoding, visual surveys and anaesthetic collections to the historical regional diversity of cryptobenthic and conspicuous fish DOI
Camila Mac Loughlin, Tania Valdivia‐Carrillo,

Salwa El Khattabi

et al.

Journal of Fish Biology, Journal Year: 2025, Volume and Issue: unknown

Published: April 19, 2025

Abstract Taxonomic gaps in community biodiversity assessments are now commonly addressed by combining traditional monitoring methods and environmental DNA (eDNA) metabarcoding, widely recognized for having the ability to uncover rare cryptic diversity. However, only a few studies have assessed efficacy of this novel technique detecting cryptobenthic fishes tested limitations incomplete genetic reference availability historically neglected component fish communities. Our goals were (i) compare conspicuous detections 12S eDNA visual surveys anaesthetic collections, (ii) emerging regional diversity patterns against long‐term historical record Gulf California. Despite adding new local references 36 fishes, metabarcoding detected seven taxa. Visual provided similar results, highlighting collections as primary source, with 57 recovered. Conspicuous had an equal highly complementary contribution surveys. When contemporary from all methods, we recovered 43% 16% relative records. The spatial structure differed expectations showing no differences richness nor composition between Northern Central study highlights that their structuring driven distinct factors compared fishes.

Language: Английский

Citations

0

Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring DOI Creative Commons
Alex D. Rogers, Hannah J. Appiah-Madson,

Jeff Ardron

et al.

Frontiers in Marine Science, Journal Year: 2023, Volume and Issue: 10

Published: Sept. 27, 2023

Ocean Census is a new Large-Scale Strategic Science Mission aimed at accelerating the discovery and description of marine species. This mission addresses knowledge gap diversity distribution life whereby an estimated 1 million to 2 species between 75% 90% remain undescribed date. Without improved biodiversity, tackling decline eventual extinction many will not be possible. The biota has evolved over 4 billion years includes branches tree that do exist on land or in freshwater. Understanding what ocean where it lives fundamental science, which required understand how works, direct indirect benefits provides society human impacts can reduced managed ensure ecosystems healthy. We describe strategy accelerate rate by: 1) employing consistent standards for digitisation data broaden access biodiversity enabling cybertaxonomy; 2) establishing working practices adopting advanced technologies taxonomy; 3) building capacity stakeholders undertake taxonomic research development, especially targeted low- middle-income countries (LMICs) so they better assess manage their waters contribute global knowledge; 4) increasing observational coverage dedicated expeditions. Census, conceived as open network scientists anchored by Biodiversity Centres developed LMICs. Through collaborative approach, including co-production science with LMICs, funding partners, focus grow current efforts discover globally, permanently transform our ability document, safeguard

Language: Английский

Citations

10