Molecular Insights Into β‐Glucuronidase Inhibition by Alhagi Graecorum Flavonoids: A Computational and Experimental Approach DOI Creative Commons
Emadeldin M. Kamel, Saleh N. Maodaa, Esam M. Al‐Shaebi

et al.

ChemistryOpen, Journal Year: 2024, Volume and Issue: unknown

Published: Nov. 19, 2024

Abstract In this study, we aimed to investigate the inhibitory mechanisms of β‐glucuronidase by flavonoids derived from Alhagi graecorum through both experimental and computational approaches. The activity was assessed using an in vitro enzyme inhibition assay, where myricetin chrysoeriol were identified as potent inhibitors based on their low IC 50 values. Kinetic studies conducted determine type, revealing that compounds exhibit noncompetitive β‐glucuronidase‐catalyzed hydrolysis PNPG. Molecular docking employed explore binding affinities flavonoids, showing formed highest number polar interactions with enzyme. Additionally, molecular dynamics (MD) simulations performed evaluate stability enzyme‐inhibitor complexes, demonstrating consistent trajectory behavior for compounds, significant energy stabilization. Interaction analyses highlighted dominant role electrostatic forces myricetin′s mechanism, while Van der Waals more prominent chrysoeriol. MM/PBSA method used calculate free energies, exhibiting lowest Potential landscape analysis further revealed adopts a closed conformation when bound these inhibitors, limiting substrate access. These findings suggest hold promise clinical applications, particularly managing drug‐induced enteropathy.

Language: Английский

Molecular Modeling Studies of Hapten Design and Antibody Recognition for Sensitive Detection of Vitamin K3 by Strip Biosensor DOI
Jialin Hu, Xinxin Xu, Liqiang Liu

et al.

Advanced Healthcare Materials, Journal Year: 2025, Volume and Issue: unknown

Published: April 1, 2025

Abstract Computer‐aided molecular design techniques are used to analyze vitamin K3 (VK3) and VK3‐hapten. Based on VK3‐hapten, a specific monoclonal antibody (mAb) against VK3 is prepared with sensitivity (IC 50 ) of 0.49 ng mL −1 . The recombinant technology investigate the docking mechanism mAb recognition VK3. Then, model established, amino acid distributions complementarity determining region regions determined. Hydrogen bonding hydrophobic interactions acids further confirmed by these results, gold immunochromatographic assay (GICA) developed detect recovery in sample 99.50%–101.12%, showing better agreement results high‐performance liquid chromatography. In addition, calculated limit detection milk powder, tablets, mixed animal feed 1.16, 1.18, 10.06 µg kg , respectively. concentrations tablets as determined GICA strips 5.82 mg/tablet 1.47 mg These that have great potential for detecting actual samples.

Language: Английский

Citations

0

Comprehensive Insights into Carbonic Anhydrase Inhibition: A Triad of In vitro, In silico, and In vivo Perspectives DOI
Ahmed A. Allam, Hassan A. Rudayni, Noha Ahmed

et al.

Enzyme and Microbial Technology, Journal Year: 2025, Volume and Issue: 189, P. 110657 - 110657

Published: April 17, 2025

Language: Английский

Citations

0

Mechanism-Based Inhibition of Aldose Reductase by Natural Xanthones: Computational and Experimental Insights for Diabetic Complications DOI
Emadeldin M. Kamel, Ahmed A. Allam, Hassan A. Rudayni

et al.

Process Biochemistry, Journal Year: 2025, Volume and Issue: 154, P. 99 - 118

Published: April 23, 2025

Language: Английский

Citations

0

In vitro and In silico mechanistic insights into PTP1B inhibition by sulfated flavonoids from Flaveria bidentis DOI
Emadeldin M. Kamel,

Doaa A. Abdelrheem,

Fahad M. Alshabrmi

et al.

Biocatalysis and Biotransformation, Journal Year: 2025, Volume and Issue: unknown, P. 1 - 17

Published: April 28, 2025

Language: Английский

Citations

0

Multidimensional insights into squalene epoxidase drug development: in vitro mechanisms, in silico modeling, and in vivo implications DOI
Ahmed A. Allam, Hassan A. Rudayni, Noha Ahmed

et al.

Expert Opinion on Therapeutic Targets, Journal Year: 2025, Volume and Issue: unknown

Published: April 30, 2025

Squalene epoxidase (SQLE) is a pivotal enzyme in sterol biosynthesis, catalyzing the conversion of squalene to 2,3-oxidosqualene. Beyond its core role cholesterol homeostasis, SQLE implicated cancer, hypercholesterolemia, and fungal infections, positioning it as valuable therapeutic target. We conducted comprehensive literature search across primary databases gather vitro, silico, vivo evidence on SQLE. This review explores enzyme's structural functional features, including substrate specificity catalytic mechanisms, examines inhibitor interactions. Computational methods predict - dynamics, guiding drug design, while investigations clarify SQLE's metabolic disorders tumorigenesis. Challenges include resistance study discrepancies, but emerging technologies, such cryo-electron microscopy CRISPR editing, offer new avenues for deeper exploration. an underexplored yet promising target, with particular relevance oxidative stress, ferroptosis, gut microbiota research. Overcoming current barriers through advanced technologies multidisciplinary strategies could propel SQLE-targeted treatments into clinical practice, supporting precision medicine broader translational applications.

Language: Английский

Citations

0

Unveiling the Molecular Mechanisms of Squalene Epoxidase Inhibition by Flavonoids from Erythrina speciosa: Integrative Computational and Experimental Insights DOI
Rasha H. Elsayed, Ayman M. Mahmoud, Sayed A. El‐Toumy

et al.

Revista Brasileira de Farmacognosia, Journal Year: 2025, Volume and Issue: unknown

Published: May 5, 2025

Language: Английский

Citations

0

A Mechanistic Experimental and Computational Exploration of Aldose Reductase Inhibition by Coumarins from Ruta chalepensis DOI
Emadeldin M. Kamel,

Doaa A. Abdelrheem,

Bashir Salah

et al.

Biochemical and Biophysical Research Communications, Journal Year: 2025, Volume and Issue: 769, P. 151946 - 151946

Published: May 7, 2025

Language: Английский

Citations

0

Multi-pronged approaches to the mechanism-based inactivation of aldose reductase by natural coumarins: molecular insights and experimental validation DOI
Emadeldin M. Kamel,

Sarah I. Othman,

Faris F. Aba Alkhayl

et al.

3 Biotech, Journal Year: 2025, Volume and Issue: 15(6)

Published: May 15, 2025

Language: Английский

Citations

0

Mechanistic insights into carbonic anhydrase IX inhibition by coumarins from Calendula officinalis: in vitro and in silico approaches DOI Creative Commons
Reem S. Alruhaimi, Emadeldin M. Kamel, Sulaiman Mohammed Alnasser

et al.

RSC Advances, Journal Year: 2024, Volume and Issue: 14(45), P. 33602 - 33618

Published: Jan. 1, 2024

Calendula officinalis is a valuable source of coumarins with potent carbonic anhydrase IX inhibitory activities.

Language: Английский

Citations

3

Molecular Insights Into β‐Glucuronidase Inhibition by Alhagi Graecorum Flavonoids: A Computational and Experimental Approach DOI Creative Commons
Emadeldin M. Kamel, Saleh N. Maodaa, Esam M. Al‐Shaebi

et al.

ChemistryOpen, Journal Year: 2024, Volume and Issue: unknown

Published: Nov. 19, 2024

Abstract In this study, we aimed to investigate the inhibitory mechanisms of β‐glucuronidase by flavonoids derived from Alhagi graecorum through both experimental and computational approaches. The activity was assessed using an in vitro enzyme inhibition assay, where myricetin chrysoeriol were identified as potent inhibitors based on their low IC 50 values. Kinetic studies conducted determine type, revealing that compounds exhibit noncompetitive β‐glucuronidase‐catalyzed hydrolysis PNPG. Molecular docking employed explore binding affinities flavonoids, showing formed highest number polar interactions with enzyme. Additionally, molecular dynamics (MD) simulations performed evaluate stability enzyme‐inhibitor complexes, demonstrating consistent trajectory behavior for compounds, significant energy stabilization. Interaction analyses highlighted dominant role electrostatic forces myricetin′s mechanism, while Van der Waals more prominent chrysoeriol. MM/PBSA method used calculate free energies, exhibiting lowest Potential landscape analysis further revealed adopts a closed conformation when bound these inhibitors, limiting substrate access. These findings suggest hold promise clinical applications, particularly managing drug‐induced enteropathy.

Language: Английский

Citations

2