bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 12, 2024
Abstract
In
the
developing
mouse
ventral
spinal
cord,
HES5,
a
transcription
factor
downstream
of
Notch
signalling,
is
expressed
as
evenly
spaced
clusters
high
HES5-expressing
neural
progenitor
cells
along
dorsoventral
axis.
While
signalling
requires
direct
membrane
contact
for
its
activation,
we
have
previously
shown
mathematically
that
needs
to
extend
beyond
neighbouring
HES5
pattern
emerge.
However,
presence
cellular
structures
could
enable
such
long-distance
was
unclear.
Here,
report
protrusions
are
present
all
apicobasal
axis
individual
cells.
Through
live
imaging,
show
these
dynamically
and
retract
reaching
lengths
up
∼20μm,
enough
adjacent
The
ligand
DLL1
found
colocalise
with
protrusions,
further
supporting
idea
can
be
transduced
at
distance.
effect
on
tested
by
reducing
density
using
CDC42
inhibitor
ML141,
leading
tendency
decrease
distance
between
cell
clusters.
this
not
significant
leaves
an
open
question
about
their
role
in
fine-grained
organisation
neurogenesis.
Abstract
Fascin
cross-links
actin
filaments
(F-actin)
into
bundles
that
support
tubular
membrane
protrusions
including
filopodia
and
stereocilia.
dysregulation
drives
aberrant
cell
migration
during
metastasis,
fascin
inhibitors
are
under
development
as
cancer
therapeutics.
Here,
we
use
cryo-EM,
cryo-electron
tomography
coupled
with
custom
denoising
computational
modeling
to
probe
human
fascin-1’s
F-actin
cross-linking
mechanisms
across
spatial
scales.
Our
cross-bridge
structure
reveals
an
asymmetric
binding
conformation
is
allosterically
blocked
by
the
inhibitor
G2.
Reconstructions
of
seven-filament
hexagonal
bundle
elements,
variability
analysis
simulations
show
how
structural
plasticity
enables
bridge
varied
interfilament
orientations,
accommodating
mismatches
between
F-actin’s
helical
symmetry
packing.
Tomography
many-filament
uncover
geometric
rules
underlying
emergent
patterns,
well
accumulation
unfavorable
limit
size.
Collectively,
this
work
shows
harnesses
fine-tuned
nanoscale
dynamics
build
regulate
micron-scale
bundles.
Science,
Journal Year:
2025,
Volume and Issue:
387(6739)
Published: March 13, 2025
In
the
developing
mammalian
heart,
endocardium
and
myocardium
are
separated
by
so-called
cardiac
jelly.
Communication
between
is
essential
for
morphogenesis.
How
membrane-localized
receptors
ligands
achieve
interaction
across
jelly
not
understood.
Working
in
mouse
morphogenesis
models,
we
used
a
variety
of
cellular,
imaging,
genetic
approaches
to
elucidate
this
question.
We
found
that
interacted
directly
through
microstructures
termed
tunneling
nanotube–like
structures
(TNTLs).
TNTLs
extended
from
cardiomyocytes
(CMs)
contact
endocardial
cells
(ECs)
directly.
transported
cytoplasmic
proteins,
transduced
signals
CMs
ECs,
initiated
myocardial
growth
toward
heart
lumen
form
ventricular
trabeculae-like
structures.
Loss
disturbed
signaling
interactions
and,
subsequently,
patterning.
Frontiers in Cell and Developmental Biology,
Journal Year:
2024,
Volume and Issue:
12
Published: July 5, 2024
Extracellular
vesicles
(EVs)
are
crucial
for
transferring
bioactive
materials
between
cells
and
play
vital
roles
in
both
health
diseases.
Cellular
protrusions,
including
filopodia
microvilli,
generated
by
the
bending
of
plasma
membrane
considered
to
be
rigid
structures
facilitating
various
cellular
functions,
such
as
cell
migration,
adhesion,
environment
sensing.
Compelling
evidence
suggests
that
these
protrusions
dynamic
flexible
can
serve
sources
a
new
class
EVs,
highlighting
unique
role
they
intercellular
material
transfer.
Cytonemes
specialized
make
direct
contact
with
neighboring
cells,
mediating
transfer
through
their
tips.
In
some
cases,
tips
fuse
creating
tunneling
nanotubes
directly
connect
cytosols
adjacent
cells.
Additionally,
virus
particles
released
from
infected
small
bud-like
protrusions.
These
different
types
which
materials,
share
common
protein
components,
I-BAR
domain-containing
proteins,
actin
cytoskeleton,
regulatory
proteins.
The
nature
highlights
importance
communication
within
body,
development,
cancer
progression,
other
The Journal of Cell Biology,
Journal Year:
2024,
Volume and Issue:
223(9)
Published: June 10, 2024
Sonic
Hedgehog
(SHH)
is
a
driver
of
embryonic
patterning
that,
when
corrupted,
triggers
developmental
disorders
and
cancers.
SHH
effector
responses
are
organized
through
primary
cilia
(PC)
that
grow
retract
with
the
cell
cycle
in
response
to
extracellular
cues.
Disruption
PC
homeostasis
corrupts
regulation,
placing
significant
pressure
on
pathway
maintain
ciliary
fitness.
Mechanisms
by
which
robustness
ensured
SHH-stimulated
cells
not
yet
known.
Herein,
we
reveal
crosstalk
circuit
induced
activation
Phospholipase
A2α
drives
E-type
prostanoid
receptor
4
(EP4)
signaling
ensure
function
stabilize
length.
We
demonstrate
blockade
SHH-EP4
destabilizes
cyclic
AMP
(cAMP)
equilibrium,
slows
transport,
reduces
length,
attenuates
induction.
Accordingly,
Ep4-/-
mice
display
shortened
neuroepithelial
altered
SHH-dependent
neuronal
fate
specification.
Thus,
initiates
coordination
between
distinct
receptors
length
for
robust
downstream
signaling.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Jan. 4, 2024
Summary
Fascin
crosslinks
actin
filaments
(F-actin)
into
bundles
that
support
tubular
membrane
protrusions
including
filopodia
and
stereocilia.
dysregulation
drives
aberrant
cell
migration
during
metastasis,
fascin
inhibitors
are
under
development
as
cancer
therapeutics.
Here,
we
use
cryo-electron
microscopy,
tomography
coupled
with
custom
denoising,
computational
modeling
to
probe
fascin’s
F-actin
crosslinking
mechanisms
across
spatial
scales.
Our
crossbridge
structure
reveals
an
asymmetric
binding
conformation
is
allosterically
blocked
by
the
inhibitor
G2.
Reconstructions
of
seven-filament
hexagonal
bundle
elements,
variability
analysis,
simulations
show
how
structural
plasticity
enables
bridge
varied
inter-filament
orientations,
accommodating
mismatches
between
F-actin’s
helical
symmetry
packing.
Tomography
many-filament
uncovers
geometric
rules
underlying
emergent
patterns,
well
accumulation
unfavorable
limit
size.
Collectively,
this
work
shows
harnesses
fine-tuned
nanoscale
dynamics
build
regulate
micron-scale
bundles.
Biology Open,
Journal Year:
2025,
Volume and Issue:
14(1)
Published: Jan. 15, 2025
ABSTRACT
In
the
developing
mouse
ventral
spinal
cord,
HES5,
a
transcription
factor
downstream
of
Notch
signalling,
is
expressed
as
evenly
spaced
clusters
high
HES5-expressing
neural
progenitor
cells
along
dorsoventral
axis.
While
signalling
requires
direct
membrane
contact
for
its
activation,
we
have
previously
shown
mathematically
that
needs
to
extend
beyond
neighbouring
HES5
pattern
emerge.
However,
presence
cellular
structures
could
enable
such
long-distance
was
unclear.
Here,
report
protrusions
are
present
all
apicobasal
axis
individual
cells.
Through
live
imaging,
show
these
dynamically
and
retract
reaching
lengths
up
∼20
µm,
enough
adjacent
The
ligand
DLL1
found
colocalise
with
protrusions,
further
supporting
idea
can
be
transduced
at
distance.
effect
on
tested
by
reducing
density
using
CDC42
inhibitor
ML141,
leading
tendency
decrease
distance
between
cell
clusters.
this
not
significant
leaves
an
open
question
about
their
role
in
fine-grained
organisation
neurogenesis.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 29, 2025
Abstract
Sonic
Hedgehog
(SHH)
signaling
functions
in
temporal-
and
context-dependent
manners
to
pattern
diverse
tissues
during
embryogenesis.
The
signal
transducer
Smoothened
(SMO)
is
activated
by
sterols,
oxysterols,
arachidonic
acid
(AA)
through
binding
pockets
its
extracellular
cysteine-rich
domain
(CRD)
7-transmembrane
(7TM)
bundle.
In
vitro
analyses
suggest
SMO
allosterically
enhanced
combinatorial
ligand
these
but
vivo
evidence
of
allostery
lacking.
Herein,
we
map
an
AA
pocket
at
the
top
7TM
bundle
show
that
disruption
attenuates
SHH
sterol-stimulated
induction.
A
knockin
mouse
model
compromised
reveals
homozygous
mutant
mice
are
cyanotic,
exhibit
high
perinatal
lethality,
congenital
heart
disease.
Surviving
mutants
demonstrate
pulmonary
maldevelopment
fail
thrive.
Neurodevelopment
unaltered
mice,
suggesting
allosteric
regulation
allows
for
precise
tuning
pathway
activity
cardiopulmonary
development.
Nature Communications,
Journal Year:
2025,
Volume and Issue:
16(1)
Published: Feb. 26, 2025
During
Drosophila
epithelial
development,
dynamic
signalling
filopodia
(cytonemes)
establish
direct
contacts
between
distant
cells
to
facilitate
the
formation
of
Hedgehog
gradient.
However,
not
much
is
known
about
how
cytonemes
are
regulated.
In
this
study,
we
show
that
cytoneme
dynamics
and
in
epithelia
depend
on
Epidermal
Growth
Factor
pathway
its
downstream
effector
Ras1.
We
describe
EGFR/Ras1
required
maintain
wing
disc
epithelium
basal
plasma
membrane
levels
Interference
(Ihog),
a
critical
Hh
co-receptor
adhesion
protein.
addition,
our
data
demonstrate
filamin
A
or
Cheerio
Drosophila,
responds
both
Ihog
EGFR
recruited
site
membrane.
This
recruitment
contributes
Ihog's
role
stabilizing
cytonemes.
The
gradient
established
by
(cytonemes).
Here,
authors
EGF
may
regulate
maintaining
epithelium.
The EMBO Journal,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 6, 2025
Cytonemes
are
signaling
filopodia
that
facilitate
long-range
cell-cell
communication
by
forming
synapses
between
cells.
Initially
discovered
in
Drosophila
for
transporting
morphogens
during
embryogenesis,
they
have
since
been
identified
mammalian
cells
and
implicated
carcinogenesis.
Despite
their
importance,
mechanisms
controlling
cytoneme
biogenesis
remain
elusive.
Here,
we
demonstrate
the
Ser/Thr
kinase
Slik
drives
remote
cell
proliferation
promoting
formation.
This
function
depends
on
coiled-coil
domain
of
(SlikCCD),
which
directly
sculpts
membranes
into
tubules.
Importantly,
plays
opposing
roles
biogenesis:
its
membrane-sculpting
activity
promotes
formation,
but
this
is
counteracted
activity,
enhances
actin
association
with
plasma
membrane
via
Moesin
phosphorylation.
In
vivo,
SlikCCD
formation
one
epithelial
layer
wing
disc
to
promote
an
adjacent
layer.
Finally,
relies
STRIPAK
complex,
controls
governs
at
a
distance
regulating
membrane.
Our
study
unveils
unexpected
structural
role
sculpting
membranes,
crucial
cytoneme-mediated
control
proliferation.
Proceedings of the National Academy of Sciences,
Journal Year:
2024,
Volume and Issue:
121(36)
Published: Aug. 27, 2024
Animals
use
a
small
number
of
morphogens
to
pattern
tissues,
but
it
is
unclear
how
evolution
modulates
morphogen
signaling
range
match
tissues
varying
sizes.
Here,
we
used
single-molecule
imaging
in
reconstituted
gradients
and
tissue
explants
determine
that
Hedgehog
diffused
extracellularly
as
monomer,
rapidly
transitioned
between
membrane-confined
-unconfined
states.
Unexpectedly,
the
vertebrate-specific
protein
SCUBE1
expanded
by
accelerating
transition
rates
states
without
affecting
relative
abundance
molecules
each
state.
This
observation
could
not
be
explained
under
existing
models
diffusion.
Instead,
developed
topology-limited
diffusion
model
which
cell–cell
gaps
create
barriers,
can
only
overcome
passing
through
membrane-unconfined
Under
this
model,
promoted
secretion
allowing
transiently
barriers.
multiscale
understanding
gradient
formation
unified
prior
identified
knobs
nature
tune
sizes
across
organisms.