It takes a plant village to raise a microbiome DOI Creative Commons
Melissa Y. Chen, Cara H. Haney

Cell Host & Microbe, Journal Year: 2023, Volume and Issue: 31(12), P. 1956 - 1958

Published: Dec. 1, 2023

Language: Английский

Host selection is not a universal driver of phyllosphere community assembly among ecologically similar native New Zealand plant species DOI Creative Commons

Anya S. Noble,

Jaber Abbaszadeh,

Charles K. Lee

et al.

Microbiome, Journal Year: 2025, Volume and Issue: 13(1)

Published: Jan. 31, 2025

Abstract Background A growing body of evidence demonstrates that host-associated microbial communities plant leaf surfaces (i.e. the phyllosphere) can influence host functional traits. However, it remains unclear whether selection is a universal driver phyllosphere community assembly. We targeted mānuka ( Leptospermum scoparium ) and three neighbouring non-mānuka species along an 1800-m transect in New Zealand native bush to conduct hypothesis-driven investigation relative identity stochastic dispersal on composition natural bacterial communities. Results detected significant correlations between are consistent with dominant role assembly microbiome. In contrast, compositions neighbouring, ecologically similar plants were highly variable, suggesting processes, such as dispersal, had stronger microbiomes those compared microbiome mānuka. Furthermore, distribution taxa among was congruent scenario which microorganisms dispersed from microbiomes. Conclusions conclude not should be presumed trait across species. The specificity suggests presence functionally bacteria under direct, possibly chemically mediated, by host. we propose strong selection, mānuka, may act source for plants.

Language: Английский

Citations

1

Geographic Location Affects the Bacterial Community Composition and Diversity More than Species Identity for Tropical Tree Species DOI Creative Commons

Kepeng Ji,

Yaqing Wei, Guoyu Lan

et al.

Plants, Journal Year: 2024, Volume and Issue: 13(11), P. 1565 - 1565

Published: June 5, 2024

Microorganisms associated with plants play a crucial role in their growth, development, and overall health. However, much remains unclear regarding the relative significance of tree species identity spatial variation shaping distribution plant bacterial communities across large tropical regions, as well how these respond to environmental changes. In this study, we aimed elucidate characteristics community composition association two rare endangered species, Dacrydium pectinatum Vatica mangachapoi, various geographical locations on Hainan Island. Our findings can be summarized follows: (1) Significant differences existed between D. V. observed diversity populations within root endosphere. Plant host-related variables, such nitrogen content, emerged key drivers influencing leaf compositions, underscoring substantial impact composition. (2) Environmental factors locations, including temperature soil pH, predominantly drove changes both root-associated compositions. These underscored influence plant-associated communities. (3) Further analysis revealed that exerted greater than compositions diversity. Overall, our study underscores variables tied location primarily dictate insights contribute understanding microbial biogeography regions carry significant implications for conservation trees.

Language: Английский

Citations

3

Host specificity of plant‐associated bacteria is negatively associated with genome size and host abundance along a latitudinal gradient DOI Creative Commons
Zihui Wang, Geneviève Lajoie, Yuan Jiang

et al.

Ecology Letters, Journal Year: 2024, Volume and Issue: 27(6)

Published: June 1, 2024

Host specialization plays a critical role in the ecology and evolution of plant-microbe symbiosis. Theory predicts that host is associated with microbial genome streamlining influenced by abundance species, both which can vary across latitudes, leading to latitudinal gradient specificity. Here, we quantified specificity composition plant-bacteria symbioses on leaves 329 tree species spanning gradient. Our analysis revealed predominance host-specialized leaf bacteria. The degree was negatively correlated bacterial size local plants. Additionally, found an increased at lower aligning high prevalence small genomes rare tropics. These findings underscore importance plant-associated bacteria along

Language: Английский

Citations

2

Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces DOI

Pratibha Sanjenbam,

Deepa Agashe

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: June 29, 2024

ABSTRACT Phyllosphere-associated microbes can significantly alter host plant fitness, with distinct functions provided by bacteria inhabiting the epiphytic (external surface) vs. endophytic niches (internal leaf tissue). Hence, it is important to understand assembly and stability of these phyllosphere communities, especially in field conditions. Broadly, communities should encounter more environmental changes immigration, whereas microbiomes face stronger selection. We analysed structure four traditionally cultivated rice landraces one commercial variety from northeast India grown for three consecutive years, supplemented opportunistic sampling 8 other landraces. Epiphytic bacterial shared dominant core genera such as Methylobacterium Sphingomonas . Consistent an overall strong effect, both varied across years than Seeds sampled a focal landrace did not support vertical transmission bacteria, suggesting that types are assembled anew each generation. Despite points convergence, had composition higher microbial load, were rich, diverse, modular, unstable communities. Finally, focused developmental stages showed divergence between two arose primarily at flowering stage. Thus, our results show convergent divergent patterns community rice, identifying key may aid agricultural interventions increase yield.

Language: Английский

Citations

1

Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces DOI Creative Commons

Pratibha Sanjenbam,

Deepa Agashe

mSphere, Journal Year: 2024, Volume and Issue: unknown

Published: Oct. 30, 2024

ABSTRACT Phyllosphere-associated microbes can significantly alter host plant fitness, with distinct functions provided by bacteria inhabiting the epiphytic (external surface) vs endophytic niches (internal leaf tissue). Hence, it is important to understand assembly and stability of these phyllosphere communities, especially in field conditions. Broadly, communities should encounter more environmental fluctuations frequent immigration, whereas microbiota face stronger selection. As a result, we expect greater variability than communities. We analyzed structure four traditionally cultivated rice landraces one commercial variety from northeast India grown for 3 consecutive years, supplemented opportunistic sampling eight other landraces. Epiphytic bacterial shared dominant core genera such as Methylobacterium Sphingomonas . Consistent an overall strong effect, both varied across years Seeds sampled focal landrace did not support vertical transmission bacteria, suggesting that types are assembled anew each generation. Despite points convergence, had composition higher microbial load were rich, diverse, modular, unstable Finally, focused developmental stages showed divergence between two arose primarily at flowering stage. Thus, our results show convergent divergent patterns community rice, identifying key may aid agricultural interventions increase yield. IMPORTANCE Phyllosphere (leaf-associated) impact making crucial how maintained. While many studies have (surface) relatively poor understanding which colonize very niche formed inside tissues. found several landraces, largely colonized same genera, indicating species level highlighting need mechanisms underlying this divergence. Surprisingly, only weakly shaped landrace, much role factors likely vary over time. microbiome-based increasing productivity could perhaps be generalized varieties but would account temporal instability microbiota. Our thus highlight importance data sets ours—with extensive years—for their applications field.

Language: Английский

Citations

1

Reassociation with a specialist insect reshapes an invader leaf fungal community DOI Creative Commons
L.J. Zhou, Yige Zhao, Bernhard Schmid

et al.

Authorea (Authorea), Journal Year: 2024, Volume and Issue: unknown

Published: March 13, 2024

Foliar herbivory is known to directly affect phyllosphere microbiomes through altering plant phenotypes. However, how evolutionary responses shape unclear. Here we use different invasive populations of the Ambrosia artemisiifolia that vary in reassociation timespan with a native specialist herbivore, test whether renewed selection imposed by herbivore accompanied shifts leaf chemistry and correlated changes microbial communities. In common garden experiments found directional fungal communities increasing duration reassociation, increased alpha diversity community complexity. These were associated concentrations metabolites, expression levels their underlying biosynthetic genes, resistance. Invasive insects can thus reshape via chemistry, demonstrating role herbivores modulating

Language: Английский

Citations

0

Fertilization impacts microbiomes along the grassland trophic chain DOI Creative Commons

Karen M. Jetter,

Kunal Jani, Kerstin Wilhelm

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 7, 2024

Abstract Agricultural grasslands are often managed intensively, influencing soil properties and microbial communities. This can result in significant community changes challenges to health function at different levels along the trophic chain. study investigates how fertilization affects communities grassland ecosystems multiple connected compartments. Shifts composition occurred response with effects being host-dependent more pronounced belowground Strong interactions between facilitated transmission of bacterial genera from roots higher levels. Pig slurry- derived microbes were found all compartments, but their low prevalence suggests an indirect effect fertilisation, primarily due nutrient availability. Our findings emphasize importance considering both individual compartments fully understand anthropogenic disturbances on environmental human health.

Language: Английский

Citations

0

It takes a plant village to raise a microbiome DOI Creative Commons
Melissa Y. Chen, Cara H. Haney

Cell Host & Microbe, Journal Year: 2023, Volume and Issue: 31(12), P. 1956 - 1958

Published: Dec. 1, 2023

Language: Английский

Citations

0