The ISME Journal,
Journal Year:
2024,
Volume and Issue:
18(1)
Published: Jan. 1, 2024
Microorganisms
colonizing
plant
roots
co-exist
in
complex,
spatially
structured
multispecies
biofilm
communities.
However,
little
is
known
about
microbial
interactions
and
the
underlying
spatial
organization
within
communities
established
on
roots.
Here,
a
well-established
four-species
model
(Stenotrophomonas
rhizophila,
Paenibacillus
amylolyticus,
Microbacterium
oxydans,
Xanthomonas
retroflexus,
termed
as
SPMX)
was
applied
to
Arabidopsis
study
impact
of
growth
community
dynamics
SPMX
co-culture
notably
promoted
root
development
biomass.
Co-cultured
increased
colonization
formed
biofilms,
structurally
different
from
those
by
monocultures.
By
combining
16S
rRNA
gene
amplicon
sequencing
fluorescence
situ
hybridization
with
confocal
laser
scanning
microscopy,
we
found
that
composition
significantly
changed
over
time.
Monoculture
P.
amylolyticus
colonized
poorly,
but
its
population
were
highly
enhanced
when
residing
biofilm.
Exclusion
reduced
overall
production
three
species,
resulting
loss
growth-promoting
effects.
Combined
analysis,
this
led
identification
keystone
species.
Our
findings
highlight
weak
colonizers
may
benefit
mutualistic
complex
hereby
become
important
species
impacting
function.
This
work
expands
knowledge
uncovering
interspecific
roots,
beneficial
for
harnessing
mutualism
promoting
growth.
Proceedings of the National Academy of Sciences,
Journal Year:
2023,
Volume and Issue:
120(6)
Published: Feb. 2, 2023
Biofilm
formation,
including
adherence
to
surfaces
and
secretion
of
extracellular
matrix,
is
common
in
the
microbial
world,
but
we
often
do
not
know
how
interaction
at
cellular
spatial
scale
translates
higher-order
biofilm
community
ecology.
Here
explore
an
especially
understudied
element
ecology,
namely
predation
by
bacterium
Bdellovibrio
bacteriovorus
.
This
predator
can
kill
consume
many
different
Gram-negative
bacteria,
Vibrio
cholerae
Escherichia
coli
V.
protect
itself
from
within
densely
packed
structures
that
it
creates,
whereas
E.
biofilms
are
highly
susceptible
B.
We
predator–prey
dynamics
change
when
growing
together.
find
dual-species
prey
biofilms,
survival
under
increases,
decreases.
benefits
protection
becomes
embedded
expanding
groups
But
also
ordered,
packed,
clonal
structure
be
disrupted
if
cells
directly
adjacent
start
growth.
When
this
occurs,
two
species
become
intermixed,
resulting
disordered
cell
block
entry.
Because
group
depends
on
initial
distributions
growth,
surface
colonization
have
a
dramatic
impact
eventual
multispecies
architecture,
which
turn
determines
what
extent
both
survive
exposure
bacteriovorus.
Microbiology Spectrum,
Journal Year:
2023,
Volume and Issue:
11(2)
Published: Feb. 14, 2023
Our
data
suggest
that
B.
cereus
AR156
can
promote
the
enrichment
of
beneficial
microorganisms
in
plant
rhizosphere
by
regulating
salicylic
acid
(SA)
and
jasmonic
(JA)/ethylene
(ET)
signaling
pathways
plants,
thereby
playing
a
role
controlling
bacterial
wilt
disease.
Meanwhile,
Spearman
correlation
analysis
showed
relative
abundances
these
bacteria
were
correlated
with
secretion
root
exudates.
npj Biofilms and Microbiomes,
Journal Year:
2024,
Volume and Issue:
10(1)
Published: April 1, 2024
Abstract
Marine
ecosystems
are
influenced
by
phytoplankton
aggregation,
which
affects
processes
like
marine
snow
formation
and
harmful
events
such
as
mucilage
outbreaks.
Phytoplankton
secrete
exopolymers,
creating
an
extracellular
matrix
(ECM)
that
promotes
particle
aggregation.
This
ECM
attracts
heterotrophic
bacteria,
providing
a
nutrient-rich
protective
environment.
In
terrestrial
environments,
bacterial
colonization
near
primary
producers
relies
on
attachment
the
of
multidimensional
structures
biofilms.
Bacteria
were
observed
attaching
aggregating
within
algal-derived
but
it
is
unclear
if
bacteria
produce
contributes
to
this
colonization.
study,
using
Emiliania
huxleyi
algae
Phaeobacter
inhibens
in
environmentally
relevant
model
system,
reveals
shared
algal-bacterial
scaffold
Algal
exudates
play
pivotal
role
promoting
colonization,
stimulating
exopolysaccharide
(EPS)
production,
facilitating
joint
formation.
A
biosynthetic
pathway
responsible
for
producing
specific
EPS
contributing
identified.
Genes
from
show
increased
expression
algal-rich
environments.
These
findings
highlight
underestimated
aggregate-mediated
offering
insights
into
interactions
formation,
with
implications
understanding
managing
natural
perturbed
aggregation
events.
The ISME Journal,
Journal Year:
2024,
Volume and Issue:
18(1)
Published: Jan. 1, 2024
Microorganisms
colonizing
plant
roots
co-exist
in
complex,
spatially
structured
multispecies
biofilm
communities.
However,
little
is
known
about
microbial
interactions
and
the
underlying
spatial
organization
within
communities
established
on
roots.
Here,
a
well-established
four-species
model
(Stenotrophomonas
rhizophila,
Paenibacillus
amylolyticus,
Microbacterium
oxydans,
Xanthomonas
retroflexus,
termed
as
SPMX)
was
applied
to
Arabidopsis
study
impact
of
growth
community
dynamics
SPMX
co-culture
notably
promoted
root
development
biomass.
Co-cultured
increased
colonization
formed
biofilms,
structurally
different
from
those
by
monocultures.
By
combining
16S
rRNA
gene
amplicon
sequencing
fluorescence
situ
hybridization
with
confocal
laser
scanning
microscopy,
we
found
that
composition
significantly
changed
over
time.
Monoculture
P.
amylolyticus
colonized
poorly,
but
its
population
were
highly
enhanced
when
residing
biofilm.
Exclusion
reduced
overall
production
three
species,
resulting
loss
growth-promoting
effects.
Combined
analysis,
this
led
identification
keystone
species.
Our
findings
highlight
weak
colonizers
may
benefit
mutualistic
complex
hereby
become
important
species
impacting
function.
This
work
expands
knowledge
uncovering
interspecific
roots,
beneficial
for
harnessing
mutualism
promoting
growth.