Optics Express,
Journal Year:
2021,
Volume and Issue:
29(14), P. 21084 - 21084
Published: May 28, 2021
Studying
the
biogeochemistry
of
Southern
Ocean
using
remote
sensing
relies
on
accurate
interpretation
ocean
colour
through
bio-optical
and
biogeochemical
relationships
between
quantities
properties
interest.
During
Antarctic
Circumnavigation
Expedition
2016/2017
Austral
Summer,
we
collected
a
spatially
comprehensive
dataset
phytoplankton
pigment
concentrations,
particulate
absorption
particle
size
distribution
compared
simple
property
as
function
chlorophyll
a.
Similar
to
previous
studies
find
that
chlorophyll-specific
coefficient
is
significantly
lower
than
in
other
oceans
at
comparable
concentrations.
This
appears
be
driven
part
by
concentrations
accessory
pigments
per
unit
well
increased
packaging
due
relatively
larger
sized
low
typically
observed
oceans.
We
contribution
microphytoplankton
(>20
µm
size)
estimates
biomass
higher
expected
for
given
concentration,
especially
latitudes
south
Circumpolar
Current
Front.
Phytoplankton
are
more
packaged
cells,
which
resulted
flattening
spectra
measured
these
samples
when
regions
with
similar
concentration.
Additionally,
high
latitude
locations
Ocean,
pheopigment
can
exceed
mono-vinyl
Finally,
very
different
volume
waters,
differences
community
composition
acclimation
environmental
conditions
varying
non-algal
particles
matter.
Our
data
confirm
that,
previously
suggested,
In
addition,
distinct
were
evident
basin.
Here
provide
region-specific
set
power
law
functions
describing
spectrum
Global Change Biology,
Journal Year:
2019,
Volume and Issue:
26(1), P. 68 - 79
Published: Oct. 16, 2019
Abstract
Continued
declines
in
coral
reef
health
over
the
past
three
decades
have
been
punctuated
by
severe
mass
bleaching‐induced
mortality
events
that
grown
intensity
and
frequency
under
climate
change.
Intensive
global
research
efforts
therefore
persistently
focused
on
bleaching
phenomena
to
understand
where
corals
bleach,
when
why—resulting
a
large—yet
still
somewhat
patchy—knowledge
base.
Particularly
catastrophic
5
years
catalyzed
calls
for
more
diverse
set
of
management
tools,
extending
far
beyond
mitigation
protection,
also
include
aggressive
interventions.
However,
effectiveness
these
various
tools
now
rests
rapidly
assimilating
our
knowledge
base
into
integrated
frameworks.
Here,
we
consider
how
intensive
has
established
basis
complex
biological
environmental
networks,
which
together
regulate
outcomes
severity.
We
discuss
enough
scaffold
conceptual
frameworks
underpinning
susceptibility,
but
new
are
urgently
required
translate
this
an
operational
system
informing—and
testing—bleaching
outcomes.
Specifically,
adopting
network
models
can
fully
describe
predict
metabolic
functioning
holobionts,
is
regulated
doses
interactions
among
factors.
Identifying
gaps
limiting
operation
such
logical
step
immediately
guide
prioritize
future
experiments
observations.
at
time‐critical
point
implement
capacity
resolve
patterns
emerge
from
biological–environmental
so
effectively
inform
evolving
ecological
social
adaptation
aimed
securing
reefs.
Frontiers in Marine Science,
Journal Year:
2019,
Volume and Issue:
6
Published: March 13, 2019
Ocean
ecosystems
are
subject
to
a
multitude
of
stressors
including
changes
in
ocean
physics
and
biogeochemistry,
direct
anthropogenic
influences.
Implementation
protective
adaptive
measures
for
requires
combination
observations
with
analysis
prediction
tools.
These
can
guide
assessments
the
current
state,
elucidate
ongoing
trends
shifts,
anticipate
impacts
climate
change
management
policies.
Analysis
tools
defined
here
as
circulation
models
that
coupled
biogeochemical
or
ecological
models.
The
range
potential
applications
these
systems
is
broad
from
reanalyses
assessment
past
states,
short-term
seasonal
forecasts,
scenario
simulations
projections.
objectives
this
article
illustrate
capabilities
regard
three
types
discuss
challenges
opportunities.
Representative
examples
global
regional
described
particular
emphasis
on
those
operational
pre-operation
use.
With
benefits
challenges,
similar
considerations
apply
do
physical
systems.
However,
at
present
there
least
two
major
differences:
1)
streams
much
sparser
than
presenting
significant
hinderance,
2)
largely
unconstrained
because
insufficient
observations.
Expansion
observing
will
allow
advances
development
application
biogeochemistry
multiple
societal
benefits.
Remote Sensing in Ecology and Conservation,
Journal Year:
2020,
Volume and Issue:
6(4), P. 557 - 568
Published: March 25, 2020
Abstract
Coral
reefs
are
among
the
most
diverse
and
iconic
ecosystems
on
Earth,
but
a
range
of
anthropogenic
pressures
threatening
their
persistence.
Owing
to
remoteness,
broad
spatial
coverage
cross‐jurisdictional
locations,
there
no
high‐resolution
remotely
sensed
maps
available
at
global
scale.
Here
we
present
framework
that
is
capable
mapping
coral
reef
habitats
from
individual
(~200
km
2
)
entire
barrier
systems
(200
000
across
vast
ocean
extents
(>6
).
This
first
time
this
has
been
demonstrated
using
consistent
transparent
remote
sensing
framework.
The
ten
achieved
good
accuracy
(78%
mean
overall
accuracy)
multiple
input
image
datasets
training
data
sources,
our
was
shown
be
adaptable
either
benthic
or
geomorphic
features
environments.
These
new
generation
map
will
useful
for
supporting
ecosystem
risk
assessments,
detecting
change
in
dynamics
targeting
efforts
monitor
local‐scale
changes
cover
health.
Journal of Operational Oceanography,
Journal Year:
2019,
Volume and Issue:
12(sup2), P. S12 - S28
Published: Aug. 8, 2019
eReefs
is
a
comprehensive
interoperable
information
platform
that
has
been
developed
for
the
Great
Barrier
Reef
(GBR)
region
to
provide
users
with
access
improved
environmental
intelligence
allowing
them
assess
past,
present,
and
future
conditions,
as
well
management
options
mitigate
risks
associated
multiple
sometimes
competing
uses
of
GBR.
built
upon
an
integrated
system
data,
catchment
marine
models,
visualisation,
reporting
decision
support
tools
span
entire
GBR
area.
This
communication
briefly
describes
architecture
components
provides
examples
applications
have
used
inform
policy
decisions,
finally
discusses
challenges
key
learnings
considers
developments
applications.
Data in Brief,
Journal Year:
2019,
Volume and Issue:
24, P. 103875 - 103875
Published: March 29, 2019
This
article
presents
the
raw
and
analysed
data
on
absorption
features
of
30
pigments
commonly
occurring
in
phytoplankton.
All
unprocessed
spectra
are
given
between
350
800
nm.
The
presented
also
gives
information
wavelength
main
peaks
together
with
associated
magnitudes
concentration-specific
coefficient.
Environmental Research Letters,
Journal Year:
2021,
Volume and Issue:
16(6), P. 064068 - 064068
Published: June 1, 2021
Abstract
The
Great
Barrier
Reef
(GBR)
is
a
globally
significant
coral
reef
system
supporting
productive
and
diverse
ecosystems.
GBR
under
increasing
threat
from
climate
change
local
anthropogenic
stressors,
with
its
general
condition
degrading
over
recent
decades.
In
response
to
this,
number
of
techniques
have
been
proposed
offset
or
ameliorate
environmental
changes.
this
study,
we
use
coupled
hydrodynamic-biogeochemical
model
the
surrounding
ocean
simulate
artificial
alkalinisation
(AOA)
as
means
reverse
impact
global
acidification
on
reefs.
Our
results
demonstrate
that
continuous
release
90
000
t
alkalinity
every
3
d
one
year
along
entire
length
GBR,
following
Gladstone-Weipa
bulk
carrier
route,
increases
mean
aragonite
saturation
state
(
Ω
mathvariant="normal">a
mathvariant="normal">r
)
across
GBR’s
3860
reefs
by
0.05.
This
offsets
just
4
years
(∼4.2)
present
rate
carbon
emissions.
injection
raises
in
250
closest
route
${\geqslant}0.15$?>
⩾0.15
,
reversing
further
projected
Ocean
Acidification.
Following
cessation
returns
value
waters
absence
AOA
6
month
period,
primarily
due
transport
additional
into
Coral
Sea.
Significantly,
our
study
provides
for
first
time
applied
existing
shipping
infrastructure
has
used
investigate
shelf
scale
impacts.
Thus,
amelioration
decades
OA
feasible
using
infrastructure,
but
likely
be
extremely
expensive,
include
yet
unquantified
risks,
would
need
undertaken
continuously
until
such
time,
probably
centuries
future,
when
atmospheric
CO
2
concentrations
returned
today’s
values.
Current Biology,
Journal Year:
2022,
Volume and Issue:
32(19), P. 4150 - 4158.e3
Published: Aug. 23, 2022
Most
tropical
corals
live
in
symbiosis
with
Symbiodiniaceae
algae
whose
photosynthetic
production
of
oxygen
(O2)
may
lead
to
excess
O2
the
diffusive
boundary
layer
(DBL)
above
coral
surface.
When
flow
is
low,
cilia-induced
mixing
DBL
vital
remove
and
prevent
oxidative
stress
that
bleaching
mortality.
Here,
we
combined
particle
image
velocimetry
using
O2-sensitive
nanoparticles
(sensPIV)
chlorophyll
(Chla)-sensitive
hyperspectral
imaging
visualize
microscale
distribution
dynamics
ciliary
flows
relation
Chla
tissue
reef
building
coral,
Porites
lutea.
Curiously,
found
an
inverse
between
underlying
tissue,
patches
high
low
surrounding
polyp
mouth
areas
pockets
concentrations
coenosarc
connecting
neighboring
polyps.
The
spatial
segregation
related
ciliary-induced
flows,
causing
a
lateral
redistribution
DBL.
In
2D
transport-reaction
model
DBL,
show
enhanced
transport
allocates
parts
surplus
containing
less
chla,
which
minimizes
stress.
Cilary
thus
confer
spatially
complex
mass
transfer
play
important
role
mitigating
corals.
Geoscientific model development,
Journal Year:
2020,
Volume and Issue:
13(9), P. 4503 - 4553
Published: Sept. 25, 2020
Abstract.
Since
the
mid-1990s,
Australia's
Commonwealth
Science
Industry
and
Research
Organisation
(CSIRO)
has
been
developing
a
biogeochemical
(BGC)
model
for
coupling
with
hydrodynamic
sediment
application
in
estuaries,
coastal
waters
shelf
seas.
The
suite
of
coupled
models
is
referred
to
as
CSIRO
Environmental
Modelling
Suite
(EMS)
applied
at
tens
locations
around
Australian
continent.
At
mature
point
BGC
model's
development,
this
paper
presents
full
mathematical
description,
well
links
freely
available
code
user
guide.
description
structured
into
processes
so
that
details
new
parameterisations
can
be
easily
identified,
along
their
derivation.
In
EMS,
underwater
light
field
simulated
by
spectrally
resolved
optical
calculates
vertical
attenuation
from
scattering
absorption
20+
optically
active
constituents.
itself
cycles
carbon,
nitrogen,
phosphorous
oxygen
through
multiple
phytoplankton,
zooplankton,
detritus
dissolved
organic
inorganic
forms
water
column
layers.
dynamically
resolve
deposition,
resuspension
benthic–pelagic
fluxes.
With
focus
on
shallow
waters,
also
includes
detailed
representations
benthic
plants
such
seagrass,
macroalgae
coral
polyps.
A
second
on,
where
possible,
use
geometric
derivations
physical
limits
constrain
ecological
rates.
This
approach
generally
requires
population-based
rates
derived
initially
considering
size
shape
individuals.
For
example,
zooplankton
grazing
considers
encounter
one
predator
prey
based
summing
relative
motion
individuals
search
area;
chlorophyll
synthesis
geometrically
self-shading
term;
bottom
coverage
calculated
biomass
using
an
exponential
form
arguments.
led
more
algebraically
complicated
set
equations
when
compared
empirical
formulations
populations.
But
while
being
complicated,
fewer
unconstrained
parameters
therefore
simpler
move
between
applications
than
it
would
otherwise
be.
version
EMS
described
here
implemented
eReefs
project
delivers
near-real-time
hydrodynamic,
simulation
Great
Barrier
Reef,
northeast
Australia,
its
formulation
provides
example
reasoning
aquatic
processes.