bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Oct. 14, 2023
Abstract
Biological
cryopreservation
often
involves
using
a
cryoprotective
agent
(CPA)
to
mitigate
lethal
physical
stressors
cells
endure
during
freezing
and
thawing,
but
effective
CPA
concentrations
are
cytotoxic.
Hence,
natural
polysaccharides
have
been
studied
as
biocompatible
alternatives.
Our
current
investigation
26
potential
CPA,
probing
correlations
between
post-thaw
metabolic
viability
(PTV)
of
cryopreserved
Vero
monomeric
composition.
The
best
performing
contained
significant
fucose
amounts,
resulting
in
average
PTV
2.8-fold
(up
3.1-fold)
compared
0.8-fold
2.2-fold
for
all
non-cryoprotective
polysaccharides,
respectively,
outperforming
the
optimized
commercial
CryoStor™
CS5
formulation
(2.6-fold).
Stoichiometrically,
balance
(18–35.7
mol%),
uronic
acids
(UA)
(13.5–26
mol%)
high
molecular
weight
(MW
>
1
MDa)
generated
optimal
PTV.
To
deconvolute
multiple
variable
effects,
principal
component
analysis
(PCA)
coupled
K
-means
clustering
was
performed.
Two
major
mechanisms
action
explained
variability:
charge-dependent
effect
contrasting
charged
acid
neutral
monomer
compositions,
MW-scaled
charge-independent
mechanism
exclusively
attributed
fucose.
Ultimately,
our
research
showed
critical
role
plays
enhancing
cellular
outcomes,
disputing
previous
assumptions
polyanionicity
being
sole
governing
predictor
cryoprotection,
highlighting
fucose-rich
polyanionic
polysaccharides.
Microbial Cell Factories,
Journal Year:
2024,
Volume and Issue:
23(1)
Published: Feb. 22, 2024
Abstract
The
marine
black
yeasts
are
characterized
by
the
production
of
many
novel
protective
substances.
These
compounds
increase
their
physiological
adaptation
to
multi-extreme
environmental
stress.
Hence,
exopolysaccharide
(EPS)
producing
yeast
SAHE
was
isolated
in
this
study.
It
molecularly
identified
as
Hortaea
werneckii
(identity
98.5%)
through
ITS1
and
ITS4
gene
sequencing
analysis.
physicochemical
properties
SAHE-EPS
were
investigated
FTIR,
GC-MS,
TGA,
ESM,
EDX
analysis,
revealing
its
heteropolysaccharide
nature.
found
be
thermostable
mainly
consists
sucrose,
maltose,
cellobiose,
lactose,
galactose.
Furthermore,
it
exhibited
an
amorphous
texture
irregular
porous
surface
structure.
showed
significant
antiradical
activity,
demonstrated
DPPH
radical
scavenging
assay,
IC50
recorded
984.9
μg/mL.
In
addition,
outstanding
anticancer
activity
toward
A549
human
lung
cancer
cell
line
(IC50
=
22.9
μg/mL).
Conversely,
demonstrates
minimal
cytotoxicity
WI-38
normal
203
μg/mL),
which
implies
safety.
This
study
represents
initial
attempt
isolate
characterize
chemical
EPS
produced
H.
a
promising
agent.
PLoS Computational Biology,
Journal Year:
2025,
Volume and Issue:
21(1), P. e1012736 - e1012736
Published: Jan. 7, 2025
The
denitrifying
bacterium
Thauera
sp.
MZ1T,
a
common
member
of
microbial
communities
in
wastewater
treatment
facilities,
can
produce
different
compounds
from
range
carbon
(C)
and
nitrogen
(N)
sources
under
aerobic
anaerobic
conditions.
In
these
conditions,
modifies
its
metabolism
to
that
influence
the
community.
particular,
MZ1T
produces
exopolysaccharides
with
floc-forming
properties,
impacting
physical
disposition
consortia
efficiency
nutrient
assimilation
by
Under
N-limiting
decreases
growth
rate
accelerates
accumulation
polyhydroxyalkanoate-related
(PHA)
including
polyhydroxybutyrate
(PHB),
which
plays
fundamental
role
as
C
energy
storage
this
β-proteobacterium.
However,
metabolic
mechanisms
employed
assimilate
catabolize
many
N
conditions
remain
unknown.
Systems
biology
approaches
such
genome-scale
modeling
have
been
successfully
used
unveil
complex
for
various
microorganisms.
Here,
we
developed
comprehensive
model
(M-model)
(iThauera861),
consisting
1,744
metabolites,
2,384
reactions,
861
genes.
We
validated
experimentally
using
over
70
both
iThauera861
achieved
prediction
accuracy
95%
on
close
85%
aromatic
M-model
was
subsequently
deployed
determine
effects
substrates,
oxygen
presence,
C:N
ratio
production
PHB
(EPS),
showing
highest
polymer
yields
are
nucleotides
amino
acids
This
will
help
reveal
processes
ubiquitous
species
influences
systems
natural
environments.
New Biotechnology,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 1, 2025
The
aim
of
this
study
was
to
explore
the
viability
dual
production
poly(3-hydroxybutyrate)
(PHB)
and
exopolysaccharides
(EPS)
by
seven
microbiomes
rich
in
cyanobacteria.
Our
initial
experiments
involved
screen
for
EPS-producing
candidates
examine
impact
salinity
acetate
on
EPS
synthesis.
Salinity's
known
influence
acetate's
role
enhancing
PHB
guided
our
parameter
selection.
Surprisingly,
neither
introduction
an
external
carbon
source
(acetate)
nor
exposure
abiotic
stressor
(salt)
significantly
altered
synthesis
rates,
which
ranged
from
25
150mg·L-1,
or
its
composition,
with
glucose
being
dominant
sugar
component.
Scaling
up
a
3L
photobioreactor,
we
achieved
simultaneous
biopolymer
production,
reaching
205mg·L-1
87mg·L-1
PHB.
Additionally,
presence
uronic
acid
facilitated
biomass
flocculation,
streamlining
separation
process,
potentially
reducing
associated
time
costs.
Biomass Conversion and Biorefinery,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 28, 2024
Abstract
In
this
work,
stale
bread
and
waste
apple
pulp
were
used
as
feedstocks
for
the
production
of
bacterial
cellulose
(BC).
A
glucose-rich
solution
was
prepared
from
by
dilute
acid
hydrolysis,
while
an
extract
comprising
fructose
glucose
obtained
pulp,
which
cultivating
Komagataeibacter
xylinus
DSM
2004,
either
sole
or
supplemented
with
Hestrin-Schramm
medium.
Supplementation
significantly
improved
BC
production:
3.38
±
0.09
g/L
2.07
0.22
hydrolysate.
There
no
significant
impact
on
chemical
structure
fiber
diameter,
but
biopolymer
produced
had
slightly
higher
crystallinity
(CI
=
59–69%)
lower
thermal
degradation
temperature
(
T
deg
341–350
℃)
than
that
hydrolysate
55%;
316–320
℃).
Moreover,
supplementation
led
to
preparation
thicker
membranes,
Young’s
modulus,
tension,
deformation
at
break
water
uptake
capacity
permeability
O
2
CO
.
These
results
show
are
suitable
cultivation
conditions
can
be
adjusted
tailoring
biopolymer’s
mechanical
barrier
properties
suit
different
applications.