Integrated metabolomic and metagenomic strategies shed light on interactions among planting environments, rhizosphere microbiota, and metabolites of tobacco in Yunnan, China DOI Creative Commons

Rentao Liao,

Zhengjie Liu,

Wenhua Dongchen

et al.

Frontiers in Microbiology, Journal Year: 2024, Volume and Issue: 15

Published: May 9, 2024

Changes in climatic factors and rhizosphere microbiota led plants to adjust their metabolic strategies for survival under adverse environmental conditions. plant metabolites can mediate crop growth development interact with of the rhizosphere. To understand interactions among factors, microbiota, tobacco, a study was conducted by using integrated metagenomic metabolomic at four typical representative tobacco planting sites Yunnan, China. The results showed that agronomical biochemical traits were significantly affected temperature, precipitation (PREP), soil pH, altitude. Correlation analyses revealed significant positive correlation temperature length, width, area leaf, while PREP correlated height effective leaf numbers. Furthermore, total sugar reducing contents baked leaves higher, nitrogen alkaloid levels lower site low PREP. A 770 detected highest number different abundant (DMs) Chuxiong (CX) as compared other three sites, which secondary more both roots tobacco. 8,479 species, belonging 2,094 genera 420 individual bins (including 13 higher-quality bins) harboring 851,209 CDSs detected. phyla microorganisms such Euryarchaeota, Myxococcota, Deinococcota enriched CX site, Pseudomonadota high-temperature good compounds low-PREP samples positively

Language: Английский

Host Metabolites in Asparagus–Fusarium Interaction: Mechanisms and Regulation DOI Creative Commons

Elsie Ayamoh Enow,

Monika Urbaniak, Łukasz Stępień

et al.

Plant Pathology, Journal Year: 2025, Volume and Issue: unknown

Published: March 16, 2025

ABSTRACT Asparagus ( officinalis ) is an important perennial vegetable crop cultivated worldwide. Its productivity and field longevity are often threatened by soilborne pathogens such as Fusarium spp., which cause wilt rot diseases. These severely reduce yield negatively impact the economic viability of asparagus cultivation. However, interaction between involves a complex interplay processes, including pathogen recognition, activation defence signalling pathways disease susceptibility. processes regulated specific metabolites that may serve signals or even facilitate infection. Despite progress in understanding mechanisms plants like Arabidopsis thaliana cereal crops, knowledge about –Fusarium pathosystem remains limited. Specifically, mechanism host regulate asparagus– still needs to be fully exploited. This article explores defensive responses towards infection spp. delves into regulatory interaction. Understanding dynamics these interactions essential for devising strategies manage ‐related diseases effectively develop disease‐resistant varieties.

Language: Английский

Citations

0

Integrated metabolomic and metagenomic strategies shed light on interactions among planting environments, rhizosphere microbiota, and metabolites of tobacco in Yunnan, China DOI Creative Commons

Rentao Liao,

Zhengjie Liu,

Wenhua Dongchen

et al.

Frontiers in Microbiology, Journal Year: 2024, Volume and Issue: 15

Published: May 9, 2024

Changes in climatic factors and rhizosphere microbiota led plants to adjust their metabolic strategies for survival under adverse environmental conditions. plant metabolites can mediate crop growth development interact with of the rhizosphere. To understand interactions among factors, microbiota, tobacco, a study was conducted by using integrated metagenomic metabolomic at four typical representative tobacco planting sites Yunnan, China. The results showed that agronomical biochemical traits were significantly affected temperature, precipitation (PREP), soil pH, altitude. Correlation analyses revealed significant positive correlation temperature length, width, area leaf, while PREP correlated height effective leaf numbers. Furthermore, total sugar reducing contents baked leaves higher, nitrogen alkaloid levels lower site low PREP. A 770 detected highest number different abundant (DMs) Chuxiong (CX) as compared other three sites, which secondary more both roots tobacco. 8,479 species, belonging 2,094 genera 420 individual bins (including 13 higher-quality bins) harboring 851,209 CDSs detected. phyla microorganisms such Euryarchaeota, Myxococcota, Deinococcota enriched CX site, Pseudomonadota high-temperature good compounds low-PREP samples positively

Language: Английский

Citations

1