Integrated Transcriptomic and Targeted Metabolomic Analysis Reveals the Key Genes Involved in Triterpenoid Biosynthesis of Ganoderma lucidum
Journal of Fungi,
Journal Year:
2025,
Volume and Issue:
11(1), P. 57 - 57
Published: Jan. 13, 2025
Ganoderma
lucidum
is
a
traditional
Chinese
medicinal
fungus,
and
ganoderma
triterpenoids
(GTs)
are
one
of
the
main
bioactive
compounds.
These
compounds
have
various
pharmacological
functions,
including
anti-tumor,
antioxidant,
anti-inflammatory,
liver-protective,
immune-regulating
effects.
However,
manner
in
which
they
accumulate,
their
biosynthesis
mechanisms
remain
unclear.
To
screen
for
genes
that
involved
biosynthetic
pathway
GTs,
this
study
analyzed
differential
metabolites
differentially
expressed
(DEGs)
among
different
growth
stages
G.
lucidum,
primordia
(P),
matured
fruiting
body
(FM),
post-spore
bodies
(FP)
using
targeted
metabolomics
transcriptomics
analysis,
respectively.
The
results
showed
total
699
components
were
detected,
lignans,
terpenoids,
amino
acids
derivatives,
phenolic
acids,
others.
Among
them,
112
types
triterpenes
detected.
Compared
with
primordia,
there
eight
triterpenoids,
three
decreasing
five
increasing
FM
stage.
A
comparison
between
stage
FP
revealed
13
triterpenoids.
analysis
371
DEGs
P_vs_FM
group,
171
down-regulated
200
up-regulated
genes.
In
FM_vs_FP
2567
identified,
1278
1289
Through
transcriptome
correlation
six
TFs
two
CYP450s
significantly
associated
four
triterpenoid
components.
these
positively
or
negatively
correlated
addition,
interestingly,
some
flavonoids
compounds,
been
reported
plants,
also
detected
indicating
it
has
potential
to
be
engineered
into
strain
capable
synthesizing
flavonoid
This
provides
useful
information
about
key
GT
biosynthesis,
but
further
exploration
in-depth
research
needed
better
understand
functions
Language: Английский
Calcium chloride enhances phenylpropanoid metabolism, antioxidant ability and phytohormone signaling to effectively alleviate chilling injury in postharvest nectarines
Postharvest Biology and Technology,
Journal Year:
2024,
Volume and Issue:
217, P. 113122 - 113122
Published: July 26, 2024
Language: Английский
Combined transcriptomic and metabolomic analyses reveal the pharmacognostic mechanism of the metabolism of flavonoids in different parts of Polygonum capitatum
Jie Yang,
No information about this author
Yu Zhang,
No information about this author
Bu‐Fa Guo
No information about this author
et al.
The Plant Genome,
Journal Year:
2025,
Volume and Issue:
18(1)
Published: Jan. 14, 2025
Abstract
The
plant
Polygonum
capitatum
(
P.
)
contains
a
variety
of
flavonoids
that
are
distributed
differently
among
different
parts.
Nevertheless,
differentially
expressed
genes
(DEGs)
associated
with
this
heterogeneous
distribution
have
not
been
identified.
In
study,
combined
transcriptomic
and
metabonomic
analysis,
we
identified
significant
DEGs
related
to
variations
in
flavonoid
composition
parts
.
Subsequently,
nontargeted
metabolomic
analyses
revealed
phenolic
acids
were
significantly
enriched
the
phenylpropanoid
biosynthesis,
shikimic
acid
biosynthesis
pathways.
expression
levels
encoding
enzymes,
including
shikimate
O
‐hydroxycinnamoyltransferase
(HCT),
chalcone
synthase
(CHS),
3′,5′‐hydroxylase
(CYP75A),
flavones
3‐hydroxylase
(F3H),
flavonol
(FLS),
leucoanthocyanidin
reductase
(LAR),
trans‐cinnamate
4‐monooxygenase
(CYP73A),
kinase
(SK),
found
be
lowest
leaves
via
quantitative
PCR.
Interestingly,
these
involved
quality
markers
such
as
gallic
acid,
quercetin,
quercitrin
Finally,
targeted
results
reconfirmed
contents
highest
This
research
provides
theoretical
basis
for
further
understanding
differential
regulatory
mechanism
metabolism
,
providing
novel
insights
into
pharmacognostic
Language: Английский
Genome-Wide Analysis of the 4-Coumarate-CoA Ligase Gene Family in Wheat: Expression Patterns under Salt Stress and Light-Regulated Cold Acclimation
Plant Stress,
Journal Year:
2025,
Volume and Issue:
16, P. 100879 - 100879
Published: May 5, 2025
Language: Английский
NtWIN1 regulates the biosynthesis of scopoletin and chlorogenic acid by targeting NtF6’H1 and NtCCoAMT genes in Nicotiana tabacum
Shun He,
No information about this author
Junping Gao,
No information about this author
Bingyu Li
No information about this author
et al.
Plant Physiology and Biochemistry,
Journal Year:
2024,
Volume and Issue:
214, P. 108937 - 108937
Published: July 14, 2024
Language: Английский
Investigating the Variation between Lignin Content and the Fracture Characteristics in Capsicum annuum Mutant Stems
Agriculture,
Journal Year:
2024,
Volume and Issue:
14(10), P. 1771 - 1771
Published: Oct. 8, 2024
The
cultivation
of
horticultural
plants
in
controlled
greenhouse
environments
is
a
pivotal
practice
modern
agriculture,
offering
the
potential
to
enhance
crop
productivity
and
mitigate
climate
change
effects.
This
study
investigates
biomechanical
properties
lignin
content
various
Capsicum
annuum
mutant
lines—‘fragile-plant’
(frx),
‘tortuous
internodi’
(tti),
‘puffy-structured
stem’
(pfi)—in
comparison
commercially
established
variety,
‘Garai
Fehér’.
We
employed
acetyl
bromide
method
quantify
conducted
three-point
bending
tests
assess
rigidity
three
distinct
regions
stem.
Gene
expression
analysis
key
biosynthetic
pathway
genes
(PAL,
C4H,
4CL,
CCoAOMT,
CAD)
was
performed
using
qRT-PCR.
results
revealed
significant
differences
breaking
force
among
genotypes
stem
regions.
tti
mutants
exhibited
similar
control
but
lower
strength,
likely
due
elongated
internodes.
frx
showed
uniformly
reduced
content,
correlating
with
their
fragile
stems.
pfi
displayed
abnormally
high
top
region
yet
demonstrated
lowest
every
region.
Overexpression
CAD
CCoAOMT
detected
specific
stem,
suggesting
alterations
biosynthesis;
however,
we
could
not
confirm
correlation
between
them.
Our
findings
indicate
that
while
generally
correlates
rigidity,
this
trait
complex
influenced
by
more
factors.
Language: Английский