A Group Contribution Analogy as Selection Criteria for Nutrients Fermentation Media in the Production of Tacrolimus, Sirolimus and Ascomycin DOI Open Access

Alessandra Suzin Bertan,

Luciana Aparecida Andrade Previato Fonseca,

Marco Aurélio Cremasco

et al.

International Journal of Latest Engineering and Management Research (IJLEMR), Journal Year: 2023, Volume and Issue: 8(9), P. 10 - 20

Published: Sept. 20, 2023

Tacrolimus, sirolimus, and ascomycin are macrolides related to a decrease in the occurrence severity of refractory rejection episodes other diseases, such as skin eyes.The determination optimum initial sources carbon nitrogen medium is an essential step optimizing fermentation process obtain these drugs.The current research proposes innovative technique selection criteria culture media sources.The concept analogy group contribution from thermodynamics identify molecular fragments.Tacrolimus, sirolimus structures results were analyzed.This approach can enhance productivity important immunosuppressants.

Language: Английский

Coumarin derivatives against diabetics: a systematic target-specific drug repurposing approach via molecular docking-dynamic simulation DOI Creative Commons
Priti Rani Sahu, Dhananjay Kumar Tanty, Susanta Kumar Sahu

et al.

Journal of Taibah University for Science, Journal Year: 2024, Volume and Issue: 19(1)

Published: Dec. 19, 2024

Coumarin derivatives (CDs) possess diverse pharmacological properties, but their antidiabetic potential is not fully explored. In this perspective, we selected 108 plant-derived CDs and investigated potency, taking a panel of putative targets: AKT1, ACACB, CDK4, α-amylase, GLUT1, PTP1B in computer-aided drug design (CADD) platform. addition, predicted toxicity, pharmacokinetics, bioavailability, ability profiles CDs. Further, molecular dynamics (MD) simulations were employed to observe the dynamic behaviour two (sanandajin or SANA, sinkianone SINK) standards (glimepiride G resveratrol RESV) with AKT1 at 100 nanoseconds. Overall, findings reveal that SANA SINK exhibited stronger binding affinities than lesser toxicity favorable drug-ability use as bioactive therapeutic agents for management diabetics. The systematic CADD analyses are able locate encourage further experimental studies mainstream applications.

Language: Английский

Citations

1

GENEvaRX: A novel AI-driven method and web tool can identify critical genes and effective drugs for Lichen Planus DOI Open Access
Turki Turki, Y‐h. Taguchi

Engineering Applications of Artificial Intelligence, Journal Year: 2023, Volume and Issue: 124, P. 106607 - 106607

Published: July 4, 2023

Language: Английский

Citations

3

Isozyme profiling of Antioxidant Enzyme in Macrotyloma uniflorum DOI Creative Commons
Kalpita Bhatta, Himansu Bhusan Samal, Pratikshya Mohanty

et al.

International Journal of experimental research and review, Journal Year: 2023, Volume and Issue: 36, P. 156 - 165

Published: Dec. 30, 2023

The current climate change and pollution scenario has invariably increased the abiotic stress of salinity, heavy metals, temperature on plants. Abiotic impacts plant's defense system, impacting crop's growth, yield, productivity. present investigation emphasised antioxidant ability Macrotyloma uniflorum under nickel which forms a major part mechanism. It intricately evaluates activities M. with respect to different Nickel doses. system plants includes enzymes including super oxide dismutase (SOD), catalase (CAT), peroxidase (POX), glutathione (GPX), dehyrdoascorbate reductase (DHAR). These act as scavengers ameliorate free radicals cellular metabolism produces. Therefore, study gives comprehensive understanding enzymatic special reference role each enzyme in response stress, especially nickel. By studying isozyme pattern these enzymes, we can compute very detailed manner. Different concentrations Ni range 25 ppm 125 were taken find optimum concentration for its activities. SOD1 was most prominent one among all at ppm. intensity GPX2 black variety is more 100 compared control. Thus, results obtained could be easily used evaluate minimum antioxidant.

Language: Английский

Citations

3

Antidiabetic potency and molecular insights of natural products bearing indole moiety: A systematic bioinformatics investigation targeting AKT1 DOI
Dhananjay Kumar Tanty, Prachi Rani Sahu, Ranjit Mohapatra

et al.

Computational Biology and Chemistry, Journal Year: 2024, Volume and Issue: 110, P. 108059 - 108059

Published: March 23, 2024

Language: Английский

Citations

0

Antidiabetic Potency of Flavonoids Using a Systematic Computer-Aided Drug Design Platform DOI Creative Commons

Deepankar Rath,

Gurudutta Pattnaik, Biswakanth Kar

et al.

International Journal of experimental research and review, Journal Year: 2024, Volume and Issue: 40(Spl Volume), P. 235 - 244

Published: June 30, 2024

Diabetic mellitus (DM) is a chronic metabolic disorder, with type 2 diabetes (T2DM) being the most prevalent globally. Despite availability of several target-specific drugs, prevalence rate has remained uncontrollable, prompting systematic exploration plant secondary metabolites or phytochemicals for mainstream use. Among all natural resources, citrus fruits like oranges, lemons, grapefruits and limes are rich sources flavonoids get more attention due to their higher antioxidant, anti-inflammatory immunomodulatory effects. Additionally, researchers have employed various strategies locate bioactive drug-able from these herbal extracts use in managing diabetes. Therefore, present study selected nine citrus-fruit-derived tested antidiabetic potency using four target enzymes: α-amylase, AKT Serine/Threonine Kinase 1 (AKT1), dipeptidyl peptidase-4 (DPP-IV), glucose transporter (GLU1) through molecular docking studies. In addition, we predicted physiochemical profile, toxicity, bioavailability, lead-likeness, drug-likeness, lethal dose flavonoids, along five standard select potential candidates. We used AutoDock 4.2 study, BIOVID-Discovery Studio protein-ligand interaction SwissADME, ProTox 3.0 Molsot tools predict drug-likeness profile. Individual average scores indicated that naringin (-11.2 -10.40 kcal/mol) was potent flavonoid, glimepiride (-11.1 -10.1 against AKT1 had among drugs. Naringin non-toxic profiles, positive score, ideal physicochemical which suggested it might be best candidate further testing. To sum up, computer-aided drug design platform an important part current discovery module accelerate phyto-based within limited time resources.

Language: Английский

Citations

0

Antidiabetic potency of glimepiride and naringin: an in silico and in vitro investigation DOI

Deepankar Rath,

Gurudutta Pattnaik, Biswakanth Kar

et al.

Journal of Biomolecular Structure and Dynamics, Journal Year: 2024, Volume and Issue: unknown, P. 1 - 12

Published: Dec. 28, 2024

Glimepiride (GLM) is one of the potential antidiabetic drugs used in clinics for a long time. It currently combination with metformin along other drugs, but has shown various complications patients from long-term use. Thus, hypothesis to use lower dose GLM non-toxic class flavonoid, naringin (NARN), better therapy minimal side-effects. Initially, we assessed binding efficacy and NARN against nine putative target enzymes using AutoDock 4.2 software. We also analysed drug chemistry, drug-ability, cytotoxicity, as well performed molecular dynamic (MD) simulation at 100 ns individual states GROMACS-2022 Both candidates showed higher efficacy, especially AKT-serine/threonine kinase-1 (AKT1) enzyme (−11.85 kcal/mol), demonstrated stability compatibility AKT1 MD-simulation (based on RMSD, Rg, RMSF, H-bond plots) than form. The vitro cytotoxicity human embryonic kidney (HEK-293) cells suggested µg/mL (observed 80% cell viability) further study. Alpha-amylase, alpha-glucosidase, DPP-IV inhibition assays revealed that both inhibited up 60% concentration-dependent manner. At end, selecting (2:8 v/v ratio) 87% µg/mL. silico studies suggest investigated formulation could be diabetics.

Language: Английский

Citations

0

GENEvaRX: A Novel AI-Driven Method and Web Tool Can Identify Critical Genes and Effective Drugs for Lichen Planus DOI Open Access
Turki Turki, Y‐h. Taguchi

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2023, Volume and Issue: unknown

Published: Feb. 24, 2023

Abstract Lichen planus (LP) is an autoimmune disorder diagnosed based on physical symptoms and lab tests. Examples of include flat bumps, itchy purplish skin, while tests a shave biopsy the lesion. When pathology report shows consistency with LP negative for potential triggers allergy test hepatitis C, dermatologist typically prescribes corticosteroid in form pills or injection into lesion to treat symptoms. To understand molecular mechanism disease thereby overcome issues associated treatment, there need identify effective drugs, drug targets, therapeutic targets LP. Hence, we propose novel computational framework new constrained optimization support vector machines coupled enrichment analysis. First, downloaded three gene expression datasets (GSE63741, GSE193351, GSE52130) pertaining healthy patients from omnibus (GEO) database. We then processed each dataset entered it our select important genes. Finally, performed analysis selected genes, reporting following results. Our methods outperformed baseline terms identifying skin tissue. Moreover, 5 drugs (including, dexamethasone, retinoic acid, quercetin), 45 unique genes (including PSMB8, KRT31, KRT16, KRT19, KRT17, COL3A1, LCE2D, LCE2A), 23 TFs NFKB1, STAT1, STAT3) reportedly related pathogenesis, treatments, targets. are publicly available GENEvaRX web server at https://aibio.shinyapps.io/GENEvaRX/ .

Language: Английский

Citations

0

A Group Contribution Analogy as Selection Criteria for Nutrients Fermentation Media in the Production of Tacrolimus, Sirolimus and Ascomycin DOI Open Access

Alessandra Suzin Bertan,

Luciana Aparecida Andrade Previato Fonseca,

Marco Aurélio Cremasco

et al.

International Journal of Latest Engineering and Management Research (IJLEMR), Journal Year: 2023, Volume and Issue: 8(9), P. 10 - 20

Published: Sept. 20, 2023

Tacrolimus, sirolimus, and ascomycin are macrolides related to a decrease in the occurrence severity of refractory rejection episodes other diseases, such as skin eyes.The determination optimum initial sources carbon nitrogen medium is an essential step optimizing fermentation process obtain these drugs.The current research proposes innovative technique selection criteria culture media sources.The concept analogy group contribution from thermodynamics identify molecular fragments.Tacrolimus, sirolimus structures results were analyzed.This approach can enhance productivity important immunosuppressants.

Language: Английский

Citations

0