Foliar application of zinc and selenium regulates cell wall fixation, physiological and gene expression to reduce cadmium accumulation in rice grains DOI

Shen Zheng,

Chao Xu,

Hanhua Zhu

et al.

Journal of Hazardous Materials, Journal Year: 2024, Volume and Issue: 480, P. 136302 - 136302

Published: Oct. 30, 2024

Language: Английский

Transcriptomics, proteomics, and metabolomics interventions prompt crop improvement against metal(loid) toxicity DOI Creative Commons
Ali Raza, Hajar Salehi, Shanza Bashir

et al.

Plant Cell Reports, Journal Year: 2024, Volume and Issue: 43(3)

Published: Feb. 27, 2024

The escalating challenges posed by metal(loid) toxicity in agricultural ecosystems, exacerbated rapid climate change and anthropogenic pressures, demand urgent attention. Soil contamination is a critical issue because it significantly impacts crop productivity. widespread threat of can jeopardize global food security due to contaminated supplies pose environmental risks, contributing soil water pollution thus impacting the whole ecosystem. In this context, plants have evolved complex mechanisms combat stress. Amid array innovative approaches, omics, notably transcriptomics, proteomics, metabolomics, emerged as transformative tools, shedding light on genes, proteins, key metabolites involved stress responses tolerance mechanisms. These identified candidates hold promise for developing high-yielding crops with desirable agronomic traits. Computational biology tools like bioinformatics, biological databases, analytical pipelines support these omics approaches harnessing diverse information facilitating mapping genotype-to-phenotype relationships under conditions. This review explores: (1) multifaceted strategies that use adapt their environment; (2) latest findings metal(loid)-mediated metabolomics studies across various plant species; (3) integration data artificial intelligence high-throughput phenotyping; (4) bioinformatics single and/or multi-omics integration; (5) insights into adaptations future outlooks; (6) capacity advances creating sustainable resilient thrive metal(loid)-contaminated environments.

Language: Английский

Citations

25

Multiomics and biotechnologies for understanding and influencing cadmium accumulation and stress response in plants DOI Creative Commons

Yu Yan,

Saleh Alseekh,

Zonghe Zhu

et al.

Plant Biotechnology Journal, Journal Year: 2024, Volume and Issue: 22(10), P. 2641 - 2659

Published: May 31, 2024

Cadmium (Cd) is one of the most toxic heavy metals faced by plants and, additionally, via food chain, threatens human health. It principally dispersed through agro-ecosystems anthropogenic activities and geogenic sources. Given its high mobility persistence, Cd, although not required, can be readily assimilated thereby posing a threat to plant growth productivity as well animal Thus, breeding crop in which edible parts contain low zero Cd safe stuffs harvesting shoots Cd-containing route for decontaminating soils are vital strategies cope with this problem. Recently, multiomics approaches have been employed considerably enhance our understanding mechanisms underlying (i) toxicity, (ii) accumulation, (iii) detoxification (iv) acquisition tolerance plants. This information deployed development biotechnological tools developing modulated safeguard cellular genetic integrity minimize chain contamination. The aim review provide current update about involved uptake recent developments area approach terms stress responses, tolerant accumulating crops.

Language: Английский

Citations

16

Peroxidase in plant defense: Novel insights for cadmium accumulation in rice (Oryza sativa L.) DOI
Jiahui Liu,

Yunxuan Lv,

Meng Li

et al.

Journal of Hazardous Materials, Journal Year: 2024, Volume and Issue: 474, P. 134826 - 134826

Published: June 5, 2024

Language: Английский

Citations

11

Metal transport proteins and transcription factor networks in plant responses to cadmium stress DOI
Chaochao Liu,

Lang Wen,

Yijia Cui

et al.

Plant Cell Reports, Journal Year: 2024, Volume and Issue: 43(9)

Published: Aug. 17, 2024

Language: Английский

Citations

10

Proteomics technologies in toxicity screening: a review DOI

Yushi Jin,

Zhijian Sun, April Z. Gu

et al.

Environmental Chemistry Letters, Journal Year: 2025, Volume and Issue: unknown

Published: Jan. 3, 2025

Language: Английский

Citations

1

Progress in Rice Breeding Based on Genomic Research DOI Open Access
Xingye Yang,

Shicong Yu,

Shen Yan

et al.

Genes, Journal Year: 2024, Volume and Issue: 15(5), P. 564 - 564

Published: April 27, 2024

The role of rice genomics in breeding progress is becoming increasingly important. Deeper research into the genome will contribute to identification and utilization outstanding functional genes, enriching diversity genetic basis materials meeting diverse demands for various improvements. Here, we review significant contributions over last 25 years, discussing profound impact on sequencing, gene exploration, novel methods, provide valuable insights future practices.

Language: Английский

Citations

5

Multi‐omics analysis reveals the biosynthesis of flavonoids during the browning process of Malus sieversii explants DOI
Yang Chen, Nan Sun, Xin Qin

et al.

Physiologia Plantarum, Journal Year: 2024, Volume and Issue: 176(2)

Published: March 1, 2024

Malus sieversii is a precious apple germplasm resource. Browning of explants one the most important factors limiting survival rate plant tissue culture. In order to explore molecular mechanism browning degree different strains sieversii, we compared dynamic changes and robusta Rehd. during whole process using multi-group method. A total 44 048 differentially expressed genes (DEGs) were identified by transcriptome analysis on DNBSEQ-T7 sequencing platform. KEGG enrichment showed that DEGs significantly enriched in flavonoid biosynthesis pathway. addition, metabonomic (-)-epicatechin, astragalin, chrysin, irigenin, isoquercitrin, naringenin, neobavaisoflavone prunin exhibited degrees free radical scavenging ability culture process, their accumulation varieties led differences among varieties. Comprehensive metabonomics data related PAL, 4CL, F3H, CYP73A, CHS, CHI, ANS, DFR PGT1 key for browning. WGCNA revealed strong correlation between known structure selected transcriptional genes. Protein interaction predictions demonstrated 19 transcription (7 MYBs 12 bHLHs) 8 structural had targeted relationships. The results show interspecific differential expression influencing factor difference Rehd., providing theoretical basis further study regulation biosynthesis.

Language: Английский

Citations

4

Root-zone regulation and longitudinal translocation cause intervarietal differences for phthalates accumulation in vegetables DOI
Bogui Pan, Xiaoqiong Zhu, Li Huang

et al.

Chemosphere, Journal Year: 2024, Volume and Issue: 359, P. 142322 - 142322

Published: May 16, 2024

Language: Английский

Citations

4

Analysis of growth physiological changes and metabolome of highland barley seedlings under cadmium (II) stress DOI

Yingyong Luo,

Xian Huang,

Ajia Sha

et al.

Environmental Pollution, Journal Year: 2025, Volume and Issue: unknown, P. 125664 - 125664

Published: Jan. 1, 2025

Language: Английский

Citations

0

Application of Fe-based S-rich material mitigates As and Cd toxicity in rice by alleviating root tip structural damage and improving bacterial community function DOI
Pengfei Luo, Yifei Sun,

Zhangqian Xu

et al.

Journal of Environmental Management, Journal Year: 2025, Volume and Issue: 376, P. 124429 - 124429

Published: Feb. 8, 2025

Language: Английский

Citations

0