Network-based approach elucidates critical genes in BRCA subtypes and chemotherapy response in triple negative breast cancer
Piyush Agrawal,
No information about this author
Navami Jain,
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Vishaka Gopalan
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et al.
iScience,
Journal Year:
2024,
Volume and Issue:
27(5), P. 109752 - 109752
Published: April 16, 2024
Breast
cancers
(BRCA)
exhibit
substantial
transcriptional
heterogeneity,
posing
a
significant
clinical
challenge.
The
global
changes
in
disease
context,
however,
are
likely
mediated
by
few
key
genes
which
reflect
etiology
better
than
the
differentially
expressed
(DEGs).
We
apply
our
network-based
tool
PathExt
to
1,059
BRCA
tumors
across
4
subtypes
identify
mediator
each
subtype.
Compared
conventional
differential
expression
analysis,
PathExt-identified
greater
concordance
tumors,
revealing
shared
and
subtype-specific
biological
processes;
recapitulate
BRCA-associated
multiple
benchmarks,
more
essential
cell
lines.
Single-cell
transcriptomic
analysis
reveals
distribution
of
types
from
tumor
microenvironment.
Application
TNBC
chemotherapy
response
dataset
identified
processes
associated
with
resistance.
described
putative
drugs
that
target
potentially
mediating
drug
Language: Английский
Predicting current and future distributions of wild medicinal shrubs Ephedra alata Decne (Ephedraceae) under climate change in Tunisia
Andrio Wibowo
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Research Square (Research Square),
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 12, 2025
Abstract
Ephedra
alata
is
a
common
wild
medicinal
plant
species
in
Tunisia.
The
ongoing
utilization
of
E.
for
applications
and
uses
threatened
by
the
changing
climate,
this
can
lead
to
potential
decline
alata's
geographic
distribution
range
In
study,
we
use
modeling
estimate
both
current
future
alata,
providing
basis
suitable
habitats
across
Herein,
climate
model
was
based
on
two
representative
concentration
pathways
representing
optimistic
scenarios
(RCP
2.6)
pessimistic
8.5)
years
2070.
mean
temperature
coldest
quarter,
seasonality,
precipitation
driest
known
as
bioclimatic
variables,
contribute
significantly
distributions.
Under
an
scenario,
ranges
remained
stable.
On
contrary,
under
scenario
2070,
governorates
Tunisia
will
decline,
with
44.17–95.35%,
or
change
cause
disapearance
alata.
future,
only
be
available
western
region,
where
it
previously
central
eastern
regions.
Language: Английский
Untargeted metabolomics approach based on UPLC-ESI-QTOF-MS/MS and evaluation of Antioxidant and Cytotoxic Activities of Nepeta deflersiana Schweinf. ex Hedge Supported by Molecular Modeling and ADMET Analysis
Ines El Mannoubi,
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Mozaniel Santana de Oliveira,
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Seham Hassan Bashir
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et al.
Journal of Molecular Structure,
Journal Year:
2025,
Volume and Issue:
1333, P. 141767 - 141767
Published: Feb. 15, 2025
Language: Английский
Ephedrannin A: A potent dual inhibitor of FAK and Src with anticancer effects
Bulletin of the Korean Chemical Society,
Journal Year:
2025,
Volume and Issue:
unknown
Published: March 1, 2025
Abstract
Cancer
is
the
leading
cause
of
death
worldwide,
and
development
effective
treatments
remains
an
important
challenge.
Here,
we
present
ephedrannin
A,
a
compound
that
exhibits
strong
anticancer
activity
against
various
types
cancer
including
lung,
liver,
colon,
kidney
cancer.
The
has
demonstrated
its
remarkable
ability
to
inhibit
cell
proliferation
invasion
similar
conferone
Y15,
known
focal
adhesion
kinase
(FAK)
inhibitors.
Treatment
with
10
μM
A
significantly
reduced
expression
FAK,
phosphorylated
FAK
proto‐oncogene
tyrosine‐protein
Src,
two
major
signaling
proteins
involved
in
progression
kidney,
lung
lines.
Furthermore,
knockdown
experiments
targeting
Src
found
no
effect
on
phosphorylation,
suggesting
FAK/Src
complex
inhibition
main
mechanism
action
A.
Co‐targeting
promising
therapeutic
strategy
because
these
play
roles
promoting
proliferation,
migration,
invasion.
By
disrupting
pathways,
could
effectively
growth
metastasis
cells.
Further
investigation
necessary
elucidate
exact
molecular
mechanisms
underlying
effects
explore
possibility
clinical
development.
Language: Английский