Molecular Biology of the Cell,
Journal Year:
2020,
Volume and Issue:
31(10), P. 1069 - 1084
Published: May 1, 2020
In
several
systems,
including
budding
yeast,
cell
cycle-dependent
changes
in
the
transcriptome
are
well
studied.
contrast,
few
studies
queried
proteome
during
division.
There
is
also
little
information
about
dynamic
metabolites
and
lipids
cycle.
Here,
authors
present
such
for
dividing
yeast
cells.
Cell Reports,
Journal Year:
2018,
Volume and Issue:
22(3), P. 569 - 575
Published: Jan. 1, 2018
How
cancer
cells
respond
to
nutrient
deprivation
remains
poorly
understood.
In
certain
cells,
of
cystine
induces
a
non-apoptotic,
iron-dependent
form
cell
death
termed
ferroptosis.
Recent
evidence
suggests
that
ferroptosis
sensitivity
may
be
modulated
by
the
stress-responsive
transcription
factor
and
canonical
tumor
suppressor
protein
p53.
Using
CRISPR/Cas9
genome
editing,
small-molecule
probes,
high-resolution,
time-lapse
imaging,
we
find
stabilization
wild-type
p53
delays
onset
in
response
deprivation.
This
delay
requires
transcriptional
target
CDKN1A
(encoding
p21)
is
associated
with
both
slower
depletion
intracellular
glutathione
reduced
accumulation
toxic
lipid-reactive
oxygen
species
(ROS).
Thus,
p53-p21
axis
help
cope
metabolic
stress
induced
delaying
non-apoptotic
death.
Signal Transduction and Targeted Therapy,
Journal Year:
2023,
Volume and Issue:
8(1)
Published: March 20, 2023
Metabolic
abnormalities
lead
to
the
dysfunction
of
metabolic
pathways
and
metabolite
accumulation
or
deficiency
which
is
well-recognized
hallmarks
diseases.
Metabolite
signatures
that
have
close
proximity
subject's
phenotypic
informative
dimension,
are
useful
for
predicting
diagnosis
prognosis
diseases
as
well
monitoring
treatments.
The
lack
early
biomarkers
could
poor
serious
outcomes.
Therefore,
noninvasive
methods
with
high
specificity
selectivity
desperately
needed.
Small
molecule
metabolites-based
metabolomics
has
become
a
specialized
tool
biomarker
pathway
analysis,
revealing
possible
mechanisms
human
various
deciphering
therapeutic
potentials.
It
help
identify
functional
related
variation
delineate
biochemical
changes
indicators
pathological
damage
prior
disease
development.
Recently,
scientists
established
large
number
profiles
reveal
underlying
networks
target
exploration
in
biomedicine.
This
review
summarized
analysis
on
potential
value
small-molecule
candidate
metabolites
clinical
events,
may
better
diagnosis,
prognosis,
drug
screening
treatment.
We
also
discuss
challenges
need
be
addressed
fuel
next
wave
breakthroughs.
Frontiers in Molecular Biosciences,
Journal Year:
2022,
Volume and Issue:
9
Published: Sept. 16, 2022
Signal
transduction
cascades
efficiently
transmit
chemical
and/or
physical
signals
from
the
extracellular
environment
to
intracellular
compartments,
thereby
eliciting
an
appropriate
cellular
response.
Most
often,
these
signaling
processes
are
mediated
by
specific
protein-protein
interactions
involving
hundreds
of
different
receptors,
enzymes,
transcription
factors,
and
signaling,
adaptor
scaffolding
proteins.
Among
them,
14-3-3
proteins
a
family
highly
conserved
molecules
expressed
in
all
eukaryotes,
where
they
modulate
function
other
proteins,
primarily
phosphorylation-dependent
manner.
Through
binding
interactions,
participate
key
processes,
such
as
cell-cycle
control,
apoptosis,
signal
transduction,
energy
metabolism,
protein
trafficking.
To
date,
several
partners
have
been
identified,
including
kinases,
phosphatases,
receptors
which
implicated
onset
various
diseases.
As
such,
promising
targets
for
pharmaceutical
interventions.
However,
despite
intensive
research
into
their
our
understanding
molecular
mechanisms
whereby
regulate
functions
remains
insufficient.
This
review
article
provides
overview
current
state
art
partners,
focusing
on
recent
structural
studies
complexes.
PLoS Biology,
Journal Year:
2017,
Volume and Issue:
15(12), P. e2004050 - e2004050
Published: Dec. 14, 2017
From
bacteria
to
humans,
individual
cells
within
isogenic
populations
can
show
significant
variation
in
stress
tolerance,
but
the
nature
of
this
heterogeneity
is
not
clear.
To
investigate
this,
we
used
single-cell
RNA
sequencing
quantify
transcript
single
Saccharomyces
cerevisiae
treated
with
and
without
salt
explore
population
identify
cellular
covariates
that
influence
stress-responsive
transcriptome.
Leveraging
extensive
knowledge
yeast
transcriptional
regulation,
uncovered
regulatory
cells,
both
before
after
stress.
We
also
discovered
a
subset
appears
decouple
expression
ribosomal
protein
genes
from
environmental
response
manner
partly
correlated
cell
cycle
unrelated
ultradian
metabolic
cycle.
Live-cell
imaging
expressing
pairs
fluorescent
regulators,
including
transcription
factor
Msn2
Dot6,
Sfp1,
or
MAP
kinase
Hog1,
revealed
coordinated
decoupled
nucleocytoplasmic
shuttling.
Together
transcriptomic
analysis,
our
results
suggest
maintain
filter
against
bursts
activation
mount
upon
even
unstressed
cells.
Nature Structural & Molecular Biology,
Journal Year:
2023,
Volume and Issue:
30(10), P. 1549 - 1560
Published: Sept. 7, 2023
To
maintain
stable
DNA
concentrations,
proliferating
cells
need
to
coordinate
replication
with
cell
growth.
For
nuclear
DNA,
eukaryotic
achieve
this
by
coupling
cell-cycle
progression,
ensuring
that
is
doubled
exactly
once
per
cycle.
By
contrast,
mitochondrial
typically
not
strictly
coupled
the
cycle,
leaving
open
question
of
how
correct
amount
during
Here,
we
show
in
budding
yeast,
copy
number
increases
volume,
both
asynchronously
cycling
populations
and
G1
arrest.
Our
findings
suggest
cell-volume-dependent
maintenance
achieved
through
nuclear-encoded
limiting
factors,
including
polymerase
Mip1
packaging
factor
Abf2,
whose
proportion
volume.
directly
linking
protein
synthesis
thus
growth,
constant
concentrations
can
be
robustly
maintained
without
a
for
cell-cycle-dependent
regulation.