High-throughput continuous evolution of compact Cas9 variants targeting single-nucleotide-pyrimidine PAMs DOI Creative Commons
Tony P. Huang, Zachary Heins, Shannon M. Miller

et al.

Nature Biotechnology, Journal Year: 2022, Volume and Issue: 41(1), P. 96 - 107

Published: Sept. 8, 2022

Despite the availability of Cas9 variants with varied protospacer-adjacent motif (PAM) compatibilities, some genomic loci-especially those pyrimidine-rich PAM sequences-remain inaccessible by high-activity proteins. Moreover, broadening sequence compatibility through engineering can increase off-target activity. With directed evolution, we generated four that together enable targeting most sequences in human genome. Using phage-assisted noncontinuous evolution and eVOLVER-supported continuous evolved Nme2Cas9, a compact variant, into recognize single-nucleotide pyrimidine-PAM sequences. We developed general selection strategy requires functional editing fully specified target protospacers PAMs. applied this to evolve eNme2-T.1, eNme2-T.2, eNme2-C eNme2-C.NR. Variants eNme2-T.1 eNme2-T.2 offer access N

Language: Английский

Drug delivery systems for RNA therapeutics DOI Open Access
Kalina Paunovska, David Loughrey, James E. Dahlman

et al.

Nature Reviews Genetics, Journal Year: 2022, Volume and Issue: 23(5), P. 265 - 280

Published: Jan. 4, 2022

Language: Английский

Citations

812

CRISPR technology: A decade of genome editing is only the beginning DOI
Joy Y. Wang, Jennifer A. Doudna

Science, Journal Year: 2023, Volume and Issue: 379(6629)

Published: Jan. 19, 2023

The advent of clustered regularly interspaced short palindromic repeat (CRISPR) genome editing, coupled with advances in computing and imaging capabilities, has initiated a new era which genetic diseases individual disease susceptibilities are both predictable actionable. Likewise, genes responsible for plant traits can be identified altered quickly, transforming the pace agricultural research breeding. In this Review, we discuss current state CRISPR-mediated manipulation human cells, animals, plants along relevant successes challenges present roadmap future technology.

Language: Английский

Citations

608

High-content CRISPR screening DOI Open Access
Christoph Bock, Paul Datlinger, Florence M. Chardon

et al.

Nature Reviews Methods Primers, Journal Year: 2022, Volume and Issue: 2(1)

Published: Feb. 10, 2022

Language: Английский

Citations

371

The CRISPR-Cas toolbox and gene editing technologies DOI Creative Commons

Guanwen Liu,

Qiupeng Lin, Shuai Jin

et al.

Molecular Cell, Journal Year: 2021, Volume and Issue: 82(2), P. 333 - 347

Published: Dec. 29, 2021

Language: Английский

Citations

260

Rational combinations of targeted cancer therapies: background, advances and challenges DOI
Haojie Jin, Liqin Wang, René Bernards

et al.

Nature Reviews Drug Discovery, Journal Year: 2022, Volume and Issue: 22(3), P. 213 - 234

Published: Dec. 12, 2022

Language: Английский

Citations

246

High-content CRISPR screening DOI
Christoph Bock, Paul Datlinger, Florence M. Chardon

et al.

Nature Reviews Methods Primers, Journal Year: 2022, Volume and Issue: 2(1)

Published: Feb. 10, 2022

Language: Английский

Citations

204

CRISPR-based genome editing through the lens of DNA repair DOI Creative Commons

Tarun S. Nambiar,

Lou Baudrier,

Pierre Billon

et al.

Molecular Cell, Journal Year: 2022, Volume and Issue: 82(2), P. 348 - 388

Published: Jan. 1, 2022

Language: Английский

Citations

154

Advances in CRISPR therapeutics DOI Open Access

Michael Chavez,

Xinyi Chen,

Paul B. Finn

et al.

Nature Reviews Nephrology, Journal Year: 2022, Volume and Issue: 19(1), P. 9 - 22

Published: Oct. 24, 2022

Language: Английский

Citations

112

Adeno-Associated Virus Toolkit to Target Diverse Brain Cells DOI Creative Commons
Rosemary C. Challis, Sripriya Ravindra Kumar, Xinhong Chen

et al.

Annual Review of Neuroscience, Journal Year: 2022, Volume and Issue: 45(1), P. 447 - 469

Published: April 20, 2022

Recombinant adeno-associated viruses (AAVs) are commonly used gene delivery vehicles for neuroscience research. They have two engineerable features: the capsid (outer protein shell) and cargo (encapsulated genome). These features can be modified to enhance cell type or tissue tropism control transgene expression, respectively. Several engineered AAV capsids with unique tropisms been identified, including variants enhanced central nervous system transduction, specificity, retrograde transport in neurons. Pairing these AAVs modern regulatory elements state-of-the-art reporter, sensor, effector enables highly specific expression anatomical functional analyses of brain cells circuits. Here, we discuss recent advances that provide a comprehensive (capsid cargo) toolkit genetic access molecularly defined types.

Language: Английский

Citations

98

Multidimensional control of therapeutic human cell function with synthetic gene circuits DOI Open Access

Hui-Shan Li,

Divya V. Israni, Keith A. Gagnon

et al.

Science, Journal Year: 2022, Volume and Issue: 378(6625), P. 1227 - 1234

Published: Dec. 15, 2022

Synthetic gene circuits that precisely control human cell function could expand the capabilities of gene- and cell-based therapies. However, platforms for developing in primary cells drive robust functional changes vivo have compositions suitable clinical use are lacking. Here, we developed synthetic zinc finger transcription regulators (synZiFTRs), which compact based largely on human-derived proteins. As a proof principle, engineered switches allow precise, user-defined over therapeutically relevant genes T using orthogonal, US Food Drug Administration-approved small-molecule inducers. Our can instruct to sequentially activate multiple cellular programs such as proliferation antitumor activity synergistic therapeutic responses. This platform should accelerate development translation diverse types contexts.

Language: Английский

Citations

98