bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Oct. 30, 2023
Abstract
T
cells
are
pivotal
in
the
adaptive
immune
defense,
necessitating
a
delicate
balance
between
robust
response
against
infections
and
self-tolerance.
Their
activation
involves
intricate
cross-talk
among
signaling
pathways
triggered
by
T-cell
antigen
receptors
(TCR)
co-stimulatory
or
inhibitory
receptors.
The
molecular
regulation
of
these
complex
networks
is
still
incompletely
understood.
We
identified
an
adaptor
protein,
ABIN1
as
component
complexes
GITR
OX40
co-stimulation
lacking
hyper-responsive
ex
vivo,
exhibit
enhanced
responses
to
cognate
infections,
superior
ability
induce
experimental
autoimmune
diabetes
mice.
observed
that
negatively
regulates
NF-κB
p38
pathways.
latter
was
at
least
partially
responsible
for
upregulation
key
effector
proteins,
IFNG
GZMB
ABIN1-deficient
after
TCR
stimulation.
Our
findings
reveal
role
its
potential
target
therapeutic
fine-tuning
responses.
Basic Research in Cardiology,
Journal Year:
2023,
Volume and Issue:
118(1)
Published: Oct. 5, 2023
Abstract
Mitochondrial
function
is
maintained
by
several
strictly
coordinated
mechanisms,
collectively
termed
mitochondrial
quality
control
including
fusion
and
fission,
degradation,
biogenesis.
As
the
primary
source
of
energy
in
cardiomyocytes,
mitochondria
are
central
organelle
for
maintaining
cardiac
function.
Since
adult
cardiomyocytes
humans
rarely
divide,
number
dysfunctional
cannot
easily
be
diluted
through
cell
division.
Thus,
efficient
degradation
crucial
to
cellular
Mitophagy,
a
specific
form
autophagy,
major
mechanism
which
damaged
or
unnecessary
targeted
eliminated.
Mitophagy
active
at
baseline
response
stress,
plays
an
essential
role
cardiomyocytes.
mediated
multiple
mechanisms
heart,
each
these
can
partially
compensate
loss
another
mechanism.
However,
insufficient
levels
mitophagy
eventually
lead
dysfunction
development
heart
failure.
In
this
review,
we
discuss
molecular
pathophysiology,
with
focus
on
recent
findings
field.
The EMBO Journal,
Journal Year:
2023,
Volume and Issue:
42(22)
Published: Aug. 25, 2023
Nix
is
a
membrane-anchored
outer
mitochondrial
protein
that
induces
mitophagy.
While
has
an
LC3-interacting
(LIR)
motif
binds
to
ATG8
proteins,
it
also
contains
minimal
essential
region
(MER)
mitophagy
through
unknown
mechanism.
We
used
chemically
induced
dimerization
(CID)
probe
the
mechanism
of
Nix-mediated
and
found
both
LIR
MER
are
required
for
robust
find
interacts
with
autophagy
effector
WIPI2
recruits
mitochondria.
The
converts
homogeneous
distribution
on
surface
mitochondria
into
puncta,
even
in
absence
ATG8s.
Together,
this
work
reveals
unanticipated
mechanisms
Nix-induced
elusive
role
MER,
while
describing
interesting
example
induction
acts
downstream
canonical
initiation
complexes.
Cell Death Discovery,
Journal Year:
2024,
Volume and Issue:
10(1)
Published: Feb. 19, 2024
Abstract
Mitochondria
produce
adenosine
triphosphate
and
potentially
contribute
to
proinflammatory
responses
cell
death.
Mitophagy,
as
a
conservative
phenomenon,
scavenges
waste
mitochondria
their
components
in
the
cell.
Recent
studies
suggest
that
severe
infections
develop
alongside
mitochondrial
dysfunction
mitophagy
abnormalities.
Restoring
protects
against
excessive
inflammation
multiple
organ
failure
sepsis.
Here,
we
review
normal
process,
its
interaction
with
invading
microorganisms
immune
system,
summarize
mechanism
of
during
infection.
We
highlight
critical
role
preventing
Nature Structural & Molecular Biology,
Journal Year:
2024,
Volume and Issue:
31(11), P. 1717 - 1731
Published: June 25, 2024
Abstract
Mitophagy
preserves
overall
mitochondrial
fitness
by
selectively
targeting
damaged
mitochondria
for
degradation.
The
regulatory
mechanisms
that
prevent
PTEN-induced
putative
kinase
1
(PINK1)
and
E3
ubiquitin
ligase
Parkin
(PINK1/Parkin)-dependent
mitophagy
other
selective
autophagy
pathways
from
overreacting
while
ensuring
swift
progression
once
initiated
are
largely
elusive.
Here,
we
demonstrate
how
the
TBK1
(TANK-binding
1)
adaptors
NAP1
(NAK-associated
protein
SINTBAD
(similar
to
adaptor)
restrict
initiation
of
OPTN
(optineurin)-driven
competing
with
TBK1.
Conversely,
they
promote
nuclear
dot
52
(NDP52)-driven
recruiting
NDP52
stabilizing
its
interaction
FIP200.
Notably,
emerges
as
primary
recruiter
during
initiation,
which
in
return
boosts
NDP52-mediated
mitophagy.
Our
results
thus
define
cargo
receptor
rheostats,
elevating
threshold
promoting
pathway
set
motion
supporting
NDP52.
These
findings
shed
light
on
cellular
strategy
hyperactivity
still
efficient
progression.
Autophagy,
Journal Year:
2024,
Volume and Issue:
20(5), P. 985 - 993
Published: Feb. 15, 2024
Mitophagy
is
the
process
of
selective
autophagy
that
removes
superfluous
and
dysfunctional
mitochondria.
was
first
characterized
in
mammalian
cells
now
recognized
to
follow
several
pathways
including
basal
forms
specific
organs.
are
regulated
by
multiple,
often
interconnected
factors.
The
present
review
aims
streamline
this
complexity
evaluate
common
elements
may
define
evolutionary
origin
mitophagy.
Key
issues
surrounding
mitophagy
signaling
at
mitochondrial
surface
fundamentally
derive
from
membrane
dynamics.
Elements
such
dynamics
likely
originated
during
endosymbiosis
alphaproteobacterial
ancestor
our
mitochondria
but
underwent
an
leap
forward
metazoa
determined
currently
known
variations
signaling.
Nature Cell Biology,
Journal Year:
2024,
Volume and Issue:
26(3), P. 366 - 377
Published: Feb. 5, 2024
Abstract
Cells
convert
complex
metabolic
information
into
stress-adapted
autophagy
responses.
Canonically,
multilayered
protein
kinase
networks
converge
on
the
conserved
Atg1/ULK
(AKC)
to
induce
non-selective
and
selective
forms
of
in
response
changes.
Here
we
show
that,
upon
phosphate
starvation,
metabolite
sensor
Pho81
interacts
with
adaptor
subunit
Atg11
at
AKC
via
an
Atg11/FIP200
interaction
motif
modulate
pexophagy
by
virtue
its
phospho-metabolite
sensing
SPX
domain.
Notably,
core
components
Atg13
Atg17
are
dispensable
for
starvation-induced
revealing
significant
compositional
functional
plasticity
AKC.
Our
data
indicate
instead
functioning
as
a
receptor,
compensates
partially
inactive
promoting
phosphorylation
Atg1
critical
during
starvation.
work
shows
subunits
bind
not
only
receptors
but
also
modulator
that
convey
directly
regulation.
Cell Reports,
Journal Year:
2024,
Volume and Issue:
43(9), P. 114689 - 114689
Published: Aug. 27, 2024
Autophagy
initiation
is
regulated
by
the
ULK1
kinase
complex.
To
gain
insights
into
functions
of
holo-complex,
we
generated
a
deep
interactome
combining
affinity
purification-
and
proximity
labeling-mass
spectrometry
all
four
complex
members:
ULK1,
ATG13,
ATG101,
RB1CC1/FIP200.
Under
starvation
conditions,
interacts
with
several
protein
lipid
kinases
phosphatases,
implying
formation
signalosome.
Interestingly,
selective
autophagy
receptors
also
interact
indicating
activation
pathways
nutrient
starvation.
One
effector
HSC/HSP70
co-chaperone
BAG2,
which
regulates
subcellular
localization
VPS34
member
AMBRA1.
Depending
on
nutritional
status,
BAG2
has
opposing
roles.
In
growth
unphosphorylated
form
sequesters
AMBRA1,
attenuating
induction.
phosphorylates
Ser31,
supports
recruitment
AMBRA1
to
ER
membrane,
positively
affecting
autophagy.
Journal of Neurochemistry,
Journal Year:
2023,
Volume and Issue:
167(4), P. 489 - 504
Published: Oct. 12, 2023
Abstract
Chronic
cerebral
hypoperfusion
leads
to
sustained
demyelination
and
a
unique
response
of
microglia.
Triggering
receptor
expressed
on
myeloid
cells
2
(Trem2),
which
is
exclusively
microglia
in
the
central
nervous
system
(CNS),
plays
an
essential
role
microglial
various
CNS
disorders.
However,
specific
Trem2
chronic
has
not
been
elucidated.
In
this
study,
we
investigated
mouse
model
induced
by
bilateral
carotid
artery
stenosis
(BCAS).
Our
results
showed
that
white
matter
demyelination,
phagocytosis,
activation
autophagic‐lysosomal
pathway,
accompanied
increase
expression.
After
knockout,
observed
attenuation
lesions
response.
deficiency
also
suppressed
phagocytosis
relieved
leading
polarization
towards
anti‐inflammatory
homeostatic
phenotypes.
Furthermore,
knockout
inhibited
lipid
droplet
accumulation
vitro.
Collectively,
these
findings
suggest
ameliorated
hypoperfusion‐induced
injury,
could
be
promising
target
for
treatment
hypoperfusion.
image
The Journal of Cell Biology,
Journal Year:
2025,
Volume and Issue:
224(4)
Published: Jan. 8, 2025
During
autophagy,
toxic
cargo
is
encapsulated
by
autophagosomes
and
trafficked
to
lysosomes
for
degradation.
NBR1,
an
autophagy
receptor
targeting
ubiquitinated
aggregates,
serves
as
a
model
studying
the
multivalent,
heterotypic
interactions
of
cargo-bound
receptors.
Here,
we
find
that
three
critical
NBR1
partners—ATG8-family
proteins,
FIP200,
TAX1BP1—each
bind
distinct,
overlapping
determinants
within
short
linear
interaction
motif
(SLiM).
To
explore
whether
SLiMs
extend
beyond
analyzed
>100
LC3-interacting
regions
(LIRs),
revealing
FIP200
and/or
TAX1BP1
binding
LIRs
common
phenomenon
suggesting
protein
hotspots.
Phosphomimetic
peptides
demonstrate
phosphorylation
generally
enhances
ATG8-family
but
not
TAX1BP1,
indicating
differential
regulation.
In
vivo,
LIR-mediated
with
promote
optimal
flux
leveraging
additional
functionalities
from
TAX1BP1.
These
findings
reveal
one-to-many
modality
in
LIR
illustrating
cooperative
mechanisms
receptors
regulatory
potential
multifunctional
SLiMs.