Transcriptome Profile Analysis of Strawberry Leaves Reveals Flowering Regulation under Blue Light Treatment DOI Creative Commons

Yuntian Ye,

Yongqiang Liu, Xiaolong Li

et al.

International Journal of Genomics, Journal Year: 2021, Volume and Issue: 2021, P. 1 - 18

Published: June 12, 2021

Blue light is an important signal that regulates the flowering of strawberry plants. To reveal mechanism early under blue treatment at transcriptional regulation level, seedlings cultivated (Fragaria × ananassa Duch.) “Benihoppe” were subjected to a white (WL) and (BL) until their flowering. detect expression patterns genes in response BL, transcriptome analysis was performed based on RNA-Seq. The results identified total 6875 differentially expressed (DEGs) responded consisting 3138 (45.64%) downregulated ones 3737 (54.36%) upregulated ones. These DEGs significantly enriched into 98 GO terms 71 KEGG pathways gene function annotation. Among DEGs, levels might participate signaling (PhyB, PIFs, HY5) circadian rhythm (FKF1, CCA1, LHY, CO) plants altered BL. BBX transcription factors which BL also identified. result showed FaBBX29, one strawberry’s family genes, may play role regulation. Our provide timely, comprehensive view reliable reference data resource for further study different qualities.

Language: Английский

Spatial regulation of thermomorphogenesis by HY5 and PIF4 in Arabidopsis DOI Creative Commons
Sang‐Hwa Lee, Wenli Wang, Enamul Huq

et al.

Nature Communications, Journal Year: 2021, Volume and Issue: 12(1)

Published: June 16, 2021

Plants respond to high ambient temperature by implementing a suite of morphological changes collectively termed thermomorphogenesis. Here we show that the above and below ground tissue-response are mediated distinct transcription factors. While central hub factor, PHYTOCHROME INTERCTING FACTOR 4 (PIF4) regulates tissue response, root elongation is primarily regulated ELONGATED HYPOCOTYL 5 (HY5). largely expressing sets genes in tissue-specific manner. HY5 promotes thermomorphogenesis via directly controlling expression many including auxin BR pathway genes. Strikingly, impaired spaQ. Because SPA1 phosphorylates PIF4 HY5, SPAs might control stability regulate both tissues. These data suggest plants employ combination SPA-PIF4-HY5 module

Language: Английский

Citations

93
How plants coordinate their development in response to light and temperature signals DOI Open Access

Xu Li,

Tong Liang,

Hongtao Liu

et al.

The Plant Cell, Journal Year: 2021, Volume and Issue: 34(3), P. 955 - 966

Published: Dec. 9, 2021

Abstract Light and temperature change constantly under natural conditions profoundly affect plant growth development. warmer temperatures promote flowering, higher light intensity inhibits hypocotyl petiole elongation, elongation. Moreover, exogenous signals must be integrated with endogenous to fine-tune phytohormone metabolism morphology. Plants perceive respond ambient using common sets of factors, such as photoreceptors multiple signal transduction components. These highly structured signaling networks are critical for survival adaptation. This review discusses how plants variable elements coordinate their Future directions research on pathways also discussed.

Language: Английский

Citations

68
Recent advances in understanding thermomorphogenesis signaling DOI Creative Commons
Carolin Delker, Marcel Quint, Philip A. Wigge

et al.

Current Opinion in Plant Biology, Journal Year: 2022, Volume and Issue: 68, P. 102231 - 102231

Published: May 27, 2022

Plants show remarkable phenotypic plasticity and are able to adjust their morphology development diverse environmental stimuli. Morphological acclimation responses elevated ambient temperatures collectively termed thermomorphogenesis. In Arabidopsis thaliana, morphological changes coordinated a large extent by the transcription factor PHYTOCHROME-INTERACTING FACTOR 4 (PIF4), which in turn is regulated several thermosensing mechanisms modulators. Here, we review recent advances identification of factors that regulate thermomorphogenesis seedlings affecting PIF4 expression activity. We summarize newly identified highlight work on emerging topic organ- tissue-specificity regulation

Language: Английский

Citations

59
The Roles of Circadian Clock Genes in Plant Temperature Stress Responses DOI Open Access
Juna Jang, Sora Lee, Jeong‐Il Kim

et al.

International Journal of Molecular Sciences, Journal Year: 2024, Volume and Issue: 25(2), P. 918 - 918

Published: Jan. 11, 2024

Plants monitor day length and memorize changes in temperature signals throughout the day, creating circadian rhythms that support timely control of physiological metabolic processes. The

Language: Английский

Citations

6
PHYTOCHROME‐INTERACTING FACTORS at the interface of light and temperature signalling DOI Creative Commons
Martin Balcerowicz

Physiologia Plantarum, Journal Year: 2020, Volume and Issue: 169(3), P. 347 - 356

Published: March 17, 2020

Plant development displays a remarkable degree of plasticity and continuously adjusts to the plant's surroundings, process that is triggered by perception environmental cues such as light temperature. Transcription factors PHYTOCHROME-INTERACTING FACTOR (PIF) family have long been established key negative regulators responses; within last decade, increasing evidence suggests they are also core components temperature signalling, multiple mechanisms which regulates activity these transcription discovered. It has become clear responses cannot be considered in isolation, but occur context of, influenced by, other signals. This review discusses recent advances understanding through affects PIF function how environment.

Language: Английский

Citations

47
SPAs promote thermomorphogenesis via regulating the phyB-PIF4 module in Arabidopsis DOI Creative Commons
Sang‐Hwa Lee, Inyup Paik, Enamul Huq

et al.

Development, Journal Year: 2020, Volume and Issue: unknown

Published: Jan. 1, 2020

High ambient temperature due to global warming has a profound influence on plant growth and development at all stages of life cycle. Plant response high termed thermomorphogenesis is characterized by hypocotyl petiole elongation, hyponastic seedling stage. However, the molecular mechanism still rudimentary. Here, we show that set four SUPPRESSOR OF PHYA-105 (SPA) genes required for thermomorphogenesis. Consistently, SPAs are necessary gene expression changes in temperature. SPA1 level unaffected, while thermosensor phyB stabilized spaQ mutant Furthermore, absence SPA genes, pivotal transcription factor PIF4 fails accumulate, indicating role regulating phyB-PIF4 module directly phosphorylates vitro, affecting kinase activity rescue as well thermo-insensitive phenotype spaQ, suggesting Taken together, these data suggest new components integrate light signaling via fine tuning module.

Language: Английский

Citations

45
Genome-Wide Association Study Reveals Candidate Genes for Flowering Time in Cowpea (Vigna unguiculata [L.] Walp.) DOI Creative Commons
Dev Paudel,

Rocheteau Dareus,

Julia Rosenwald

et al.

Frontiers in Genetics, Journal Year: 2021, Volume and Issue: 12

Published: June 16, 2021

Cowpea (Vigna unguiculata [L.] Walp., diploid, 2n = 22) is a major crop used as protein source for human consumption well quality feed livestock. It drought and heat tolerant has been bred to develop varieties that are resilient changing climates. Plant adaptation new climates their yield strongly affected by flowering time. Therefore, understanding the genetic basis of time critical advance cowpea breeding. The aim this study was perform genome-wide association studies (GWAS) identify marker trait associations in using single nucleotide polymorphism (SNP) markers. A total 368 accessions from mini-core collection were evaluated Ft. Collins, CO 2019 2020, 292 Citra, FL 2018. These genotyped iSelect Consortium Array contained 51,128 SNPs. GWAS revealed seven reliable SNPs explained 8-12% phenotypic variance. Candidate genes including FT, GI, CRY2, LSH3, UGT87A2, LIF2, HTA9 associated with identified significant SNP Further efforts validate these loci will help understand role cowpea, it could facilitate transfer some knowledge other closely related legume species.

Language: Английский

Citations

37
Functions of Phytochrome-Interacting Factors (PIFs) in the regulation of plant growth and development: A comprehensive review DOI
Aishwarye Sharma, Harsha Samtani,

Karishma Sahu

et al.

International Journal of Biological Macromolecules, Journal Year: 2023, Volume and Issue: 244, P. 125234 - 125234

Published: June 7, 2023

Language: Английский

Citations

15
Temperature regulation of auxin-related gene expression and its implications for plant growth DOI
Luciana Bianchimano, María Belén De Luca, María Belén Borniego

et al.

Journal of Experimental Botany, Journal Year: 2023, Volume and Issue: 74(22), P. 7015 - 7033

Published: July 9, 2023

Abstract Twenty-five years ago, a seminal paper demonstrated that warm temperatures increase auxin levels to promote hypocotyl growth in Arabidopsis thaliana. Here we highlight recent advances auxin-mediated thermomorphogenesis and identify unanswered questions. In the warmth, PHYTOCHROME INTERACTING FACTOR 4 (PIF4) PIF7 bind YUCCA8 gene promoter and, concert with histone modifications, enhance its expression synthesis cotyledons. Once transported hypocotyl, promotes cell elongation. The meta-analysis of auxin-related genes seedlings exposed ranging from cold hot shows complex patterns response. Changes only partially account for these responses. many SMALL AUXIN UP RNA (SAUR) reaches maximum decreasing towards both temperature extremes correlation rate growth. Warm primary root growth, response requires auxin, hormone tip but impacts on division expansion are not clear. A deeper understanding control plant architecture is necessary face challenge global warming.

Language: Английский

Citations

14
A warm temperature-released negative feedback loop fine-tunes PIF4-mediated thermomorphogenesis in Arabidopsis DOI Creative Commons
Hui Li, Mande Xue, Huairen Zhang

et al.

Plant Communications, Journal Year: 2024, Volume and Issue: 5(5), P. 100833 - 100833

Published: Feb. 7, 2024

Plants can sense temperature changes and adjust their growth accordingly. In Arabidopsis, high ambient temperatures stimulate stem elongation by activating a key thermoresponsive regulator, PHYTOCHROME INTERACTING FACTOR 4 (PIF4). Here, we show that warmth promotes the nighttime transcription of GI, which is necessary for temperature-induced TOC1. Genetic analyses suggest GI prevents excessive inhibiting PIF4, with this regulatory mechanism being partially reliant on repressed ELF3 HY5, concurrently inhibit PIF4 expression activity. Temperature elevation causes deactivation or degradation leading to activation relief transcriptional repression at temperatures. This allows further activate in response elevated turn, inhibits establishing negative feedback loop fine-tunes addition, demonstrate ELF3, regulate modulating enrichment histone variant H2A.Z locus. Together, our findings thermal release finely adjusts plant thermomorphogenesis.

Language: Английский

Citations

6