Journal of Molecular Modeling, Journal Year: 2024, Volume and Issue: 30(11)
Published: Oct. 2, 2024
Language: Английский
Journal of Molecular Modeling, Journal Year: 2024, Volume and Issue: 30(11)
Published: Oct. 2, 2024
Language: Английский
Heliyon, Journal Year: 2024, Volume and Issue: 10(7), P. e28623 - e28623
Published: March 26, 2024
The (E)-4-((4-hydroxy-3-methoxy-5-nitrobenzylidene) amino) pyrimidin-2(1H)-one (C5NV) was synthesized from cytosine and 5-nitrovanilline by simple straightforward condensation reaction. structural characteristics of the compound determined optimized WB97XD/cc-pVDZ basis set. vibrational frequencies were computed subsequently compared to experimental frequencies. We investiated electronic properties in gas solvent phases using time-dependent density functional theory (TD-DFT) approach, them values. fluorescence study showed three different wavelengths indicating nature optical material properties. Frontier molecular orbital (FMO) electrostatic potential (MEP) analyses conducted for title compound, electron localized functions (ELF) locators (LOL) used identify positions delocalized atoms. Non-covalent interactions (H-bond interactions) investigated reduced gradients (RDGs). objective determine physical, chemical, biological C5NV. docking between C5NV 2XNF protein, its lowest binding energy score is −7.92 kcal/mol.
Language: Английский
Citations
14Journal of Molecular Structure, Journal Year: 2024, Volume and Issue: 1303, P. 137570 - 137570
Published: Jan. 14, 2024
Language: Английский
Citations
12Journal of Molecular Liquids, Journal Year: 2024, Volume and Issue: 400, P. 124570 - 124570
Published: March 25, 2024
Language: Английский
Citations
12Journal of Biomolecular Structure and Dynamics, Journal Year: 2024, Volume and Issue: unknown, P. 1 - 16
Published: April 24, 2024
The novel Schiff's base (CS6) was synthesized and confirmed by various studies. B3LYP/cc-pVDZ basis set used for theoretical study the results indicated that both experimental studies correlated well. interaction energy of CS6-water complex calculated using local decomposition analysis found to be -7.28 kcal/mol. TD-TFT method calculation electronic absorption spectrum. This observed wavelength simulated in spectra were almost similar. electrophilic nucleophilic attacking sites titled compound identified FMO MEP highest stabilization (30.19 kcal/mol) formed LP (2) O24 anti-bonding σ*(C18-C19) NBO study. localized delocalized electrons ELF LOL hydrogen bond as well physical chemical properties CS6 it showed a moderate similarity drugs. docking dehydro-L-gulonate decarboxylase inhibitor (1Q6O) could interact with binding -5.26 kcal/mol.Communicated Ramaswamy H. Sarma.
Language: Английский
Citations
12Journal of Molecular Structure, Journal Year: 2024, Volume and Issue: 1318, P. 139346 - 139346
Published: July 17, 2024
Language: Английский
Citations
9Journal of Molecular Liquids, Journal Year: 2024, Volume and Issue: 415, P. 126404 - 126404
Published: Nov. 3, 2024
Language: Английский
Citations
9Journal of Molecular Structure, Journal Year: 2024, Volume and Issue: 1323, P. 140711 - 140711
Published: Nov. 10, 2024
Language: Английский
Citations
8Journal of Molecular Structure, Journal Year: 2024, Volume and Issue: 1315, P. 138808 - 138808
Published: May 31, 2024
Language: Английский
Citations
3Molecular Physics, Journal Year: 2024, Volume and Issue: unknown
Published: Oct. 29, 2024
The study extensively examined N,N'-(4-methyl-1,3-phenylene)bis(1-(2,4-dichlorophenyl)methanimine) (6D). Advanced spectroscopic techniques, including IR, Raman, NMR, and UV-VIS spectroscopies, were employed to analyse the molecule. Schiff base was ultimately confirmed using NMR spectrum analysis. revealed a notable bathochromic change in compound, indicating their electronic transitions. By HOMO–LUMO bond gap titled compound reactivity sites identified. 6D band is 3.70 eV. Various wave function investigations like MESP, HOMO–LUMO, RDG, ELF, LOL, ALIE conducted elucidate distribution of charge, providing valuable insights into behaviour molecules. biological probability synthesised assessed docking study. Using MEP investigations, we confirm nucleophilic electrophilic attacking sites. In study, protein Bovine cytochrome bc1 complex stigma Tellin bound (PDB ID–1PP9) downloaded. identified most stable minimum binding energy –6.26 kcal/mol.
Language: Английский
Citations
3ChemistrySelect, Journal Year: 2024, Volume and Issue: 9(17)
Published: April 26, 2024
Abstract Bromouracil derivatives are synthesized using an environmentally acceptable bromination protocol involving NaBr as a promoter. A minimum of 1.5 equivalent was required to reach the maximum yield. The reactions were conducted in acidic medium presence H 2 O under ambient conditions. We successfully ten novel 5‐bromouracil available our laboratory and characterized them various spectroscopic methods such 1 H‐NMR, 13 C‐NMR, SC‐XRD. All screened for anti‐bacterial activities against gram‐positive gram‐negative bacteria. In particular, compounds 5‐bromo‐4‐chloro‐6‐methylpyrimidin‐2‐amine 5‐bromo‐6‐chloropyrimidine‐2,4‐diamine exhibited prominent antibacterial activity E. coli with IC 50 values ~9.8 ~5.7 μg/mL. structural‐activity relationship revealed that −NH group both bromo affirms improving activity. Molecular docking studies also supported experimental result showed good binding energy −4.4 ( ) −4.8 b kcal/mol primase.
Language: Английский
Citations
2