bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: April 1, 2023
Abstract
Advances
in
single-cell
sequencing
technologies
have
provided
novel
insights
into
the
dynamics
of
gene
expression
throughout
development,
been
used
to
characterize
somatic
variation
and
heterogeneity
within
tissues,
are
currently
enabling
construction
transcriptomic
cell
atlases.
However,
despite
these
remarkable
advances,
linking
anatomical
information
data
positively
identifying
types
that
correspond
clusters
sets
remains
a
challenge.
We
describe
straightforward
genetic
barcoding
approach
takes
advantage
powerful
tools
available
Drosophila
allow
vivo
tagging
defined
populations.
This
method,
called
Ta
rgeted
G
enetically-
E
ncoded
M
ultiplexing
(TaG-EM),
involves
inserting
DNA
barcode
just
upstream
polyadenylation
site
Gal4-inducible
UAS-GFP
construct
so
sequence
can
be
read
out
during
sequencing,
labeling
population
interest.
By
creating
many
such
independently
barcoded
fly
strains,
TaG-EM
will
enable
number
potential
applications
improve
quality
content
including
positive
identification
atlas
projects,
multiplet
droplets,
experimental
timepoints,
conditions,
replicates.
Furthermore,
we
demonstrate
barcodes
from
lines
using
next-generation
facilitate
population-scale
behavioral
measurements.
Thus,
has
large-scale
screens
addition
improving
ability
reliably
annotate
data,
expanding
scope,
robustness
experiments.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 29, 2024
Insulin
plays
a
key
role
in
metabolic
homeostasis
across
vertebrate
and
invertebrate
species.
Drosophila
Insulin-Producing
Cells
(IPCs)
are
functional
analogues
to
mammalian
pancreatic
beta
cells
release
insulin
directly
into
circulation.
IPC
activity
is
modulated
by
nutrient
availability,
circadian
time,
the
behavioral
state.
To
investigate
vivo
dynamics
of
context
homeostasis,
we
quantified
effects
nutritional
internal
state
changes
on
IPCs
using
electrophysiological
recordings.
We
found
that
strongly
modulates
activity.
became
less
active
with
increasing
periods
starvation.
Refeeding
starved
flies
glucose
or
fructose,
two
nutritive
sugars,
significantly
increased
activity,
whereas
non-nutritive
sugar
protein
had
no
effect.
In
contrast
feeding,
perfusion
did
not
affect
This
was
reminiscent
incretin
effect,
which
ingestion
drives
higher
than
intravenous
application.
Contrary
IPCs,
Diuretic
hormone
44-expressing
neurons
pars
intercerebralis
(DH44
PI
Ns),
anatomically
similar
responded
perfusion.
Functional
connectivity
experiments
demonstrated
glucose-sensing
DH44
Ns
do
while
other
DH44Ns
inhibit
IPCs.
suggests
populations
autonomously
systemically
sugar-sensing
work
parallel
maintain
homeostasis.
Ultimately,
behavior.
For
example,
hungry
increase
their
locomotor
search
food.
support
this
idea,
activating
small,
satiety-like
effect
flies,
resulting
reduced
walking
Taken
together,
show
an
integral
part
sophisticated
modulatory
network
orchestrates
adaptive
behavior
response
shifts
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Nov. 4, 2024
ABSTRACT
The
Arc
genes
—
which
include
Drosophila
Arc1
and
Arc2
(
dArc
)
evolved
from
Ty3
retrotransposons
encode
proteins
that
form
virus-like
capsids.
These
capsids
enable
a
novel
of
intercellular
communication
by
transferring
RNAs
between
cells.
However,
the
specific
neuronal
circuits
brain
processes
signaling
regulates
remain
unknown.
Here,
we
show
loss
both
in
melanogaster
enhances
associative
learning
an
appetitive
conditioning
paradigm,
where
flies
associate
odor
with
sugar
rewards.
This
increased
performance
arises
valuation
rewards:
unlike
wild-type
flies,
-/-
abnormally
strong
associations
even
when
reward
is
small
or
has
no
caloric
value.
We
found
γ5-dopaminergic
neurons
protocerebral
anterior
medial
(PAM)
cluster,
positive
valence
rewards,
heightened
activity
response
to
sucrose
flies.
further
phenotype
depends
on
formation
capsids,
underscoring
direct
role
for
capsid-mediated
valuation.
Our
findings
establish
as
critical
regulators
D.
,
acting
through
non-cell
autonomous
mechanism
relies
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2022,
Volume and Issue:
unknown
Published: Oct. 21, 2022
Summary
Mated
females
reallocate
resources
to
offspring
production,
causing
changes
in
nutritional
requirements
and
challenges
energy
homeostasis.
Although
observed
most
species,
the
neural
endocrine
mechanisms
that
regulate
needs
of
mated
are
not
well
understood.
Here,
we
investigate
circuitry
regulates
sugar
appetite
Drosophila
melanogaster
females.
During
copulation,
a
male-derived
sex
peptide
is
transferred
females,
silencing
mating
status
circuit
elicit
many
postmating
behavioral
1-3
.
We
find
increased
sucrose
consumption
postmated
female
behavior
show
it
mediated
by
circuit.
discovered
sexually
dimorphic
insulin
receptor
(Lgr3)
neurons
integrate
state
signals
adjust
consumption.
Lgr3+
cells
receive
inhibitory
input
from
via
specific
pCd-2
neurons.
In
inhibition
Lgr3
attenuated,
transforming
signal
into
long-term
hunger
promotes
intake.
Our
results
thus
demonstrate
alters
nutrient
sensing
centers
promote
consumption,
providing
mechanism
increase
intake
anticipation
energetic
costs
associated
with
reproduction.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2023,
Volume and Issue:
unknown
Published: April 1, 2023
Abstract
Advances
in
single-cell
sequencing
technologies
have
provided
novel
insights
into
the
dynamics
of
gene
expression
throughout
development,
been
used
to
characterize
somatic
variation
and
heterogeneity
within
tissues,
are
currently
enabling
construction
transcriptomic
cell
atlases.
However,
despite
these
remarkable
advances,
linking
anatomical
information
data
positively
identifying
types
that
correspond
clusters
sets
remains
a
challenge.
We
describe
straightforward
genetic
barcoding
approach
takes
advantage
powerful
tools
available
Drosophila
allow
vivo
tagging
defined
populations.
This
method,
called
Ta
rgeted
G
enetically-
E
ncoded
M
ultiplexing
(TaG-EM),
involves
inserting
DNA
barcode
just
upstream
polyadenylation
site
Gal4-inducible
UAS-GFP
construct
so
sequence
can
be
read
out
during
sequencing,
labeling
population
interest.
By
creating
many
such
independently
barcoded
fly
strains,
TaG-EM
will
enable
number
potential
applications
improve
quality
content
including
positive
identification
atlas
projects,
multiplet
droplets,
experimental
timepoints,
conditions,
replicates.
Furthermore,
we
demonstrate
barcodes
from
lines
using
next-generation
facilitate
population-scale
behavioral
measurements.
Thus,
has
large-scale
screens
addition
improving
ability
reliably
annotate
data,
expanding
scope,
robustness
experiments.