Molecular Ecology Resources,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 4, 2024
Abstract
Mitigating
ongoing
losses
of
insects
and
their
key
functions
(e.g.
pollination)
requires
tracking
large‐scale
long‐term
community
changes.
However,
doing
so
has
been
hindered
by
the
high
diversity
insect
species
that
prohibitively
investments
time,
funding
taxonomic
expertise
when
addressed
with
conventional
tools.
Here,
we
show
these
concerns
can
be
through
a
comprehensive,
scalable
cost‐efficient
DNA
metabarcoding
workflow.
We
use
1815
samples
from
75
Malaise
traps
across
Germany
2019
2020
to
demonstrate
how
incorporated
into
monitoring
networks
for
less
than
50
€
per
sample,
including
supplies,
labour
maintenance.
validated
detected
using
two
publicly
available
databases
(GBOL
GBIF)
judgement
experts.
With
an
average
1.4
M
sequence
reads
sample
uncovered
10,803
species,
which
83.9%
were
represented
single
Operational
Taxonomic
Unit
(OTU).
estimated
another
21,043
plausible
argue
either
lack
reference
barcode
or
are
undescribed.
The
total
31,846
is
similar
number
known
(~35,500).
Because
capture
only
subset
insects,
our
approach
identified
many
likely
unknown
new
science.
Our
reproducible
workflow
(~80%
OTU‐similarity
among
years)
provides
blueprint
biodiversity
other
components
in
near
real
time.
Ecology and Evolution,
Journal Year:
2022,
Volume and Issue:
12(2)
Published: Feb. 1, 2022
Abstract
Climate
change
and
other
global
drivers
threaten
plant
diversity
in
mountains
worldwide.
A
widely
documented
response
to
such
environmental
modifications
is
for
species
their
elevational
ranges.
Range
shifts
are
often
idiosyncratic
difficult
generalize,
partly
due
variation
sampling
methods.
There
thus
a
need
standardized
monitoring
strategy
that
can
be
applied
across
mountain
regions
assess
distribution
changes
community
turnover
of
native
non‐native
over
space
time.
Here,
we
present
conceptually
intuitive
protocol
developed
by
the
Mountain
Invasion
Research
Network
(MIREN)
systematically
quantify
patterns
distributions
along
elevation
gradients
arising
from
interactive
effects
climate
human
disturbance.
Usually
repeated
every
five
years,
surveys
consist
20
sample
sites
located
at
equal
increments
three
replicate
roads
per
region.
At
each
site,
plots
extend
side
road
into
surrounding
natural
vegetation.
The
has
been
successfully
used
18
worldwide
2007
present.
Analyses
one
point
time
already
generated
some
salient
results,
revealed
region‐specific
richness,
but
globally
consistent
decline
richness.
Non‐native
plants
were
also
more
abundant
directly
adjacent
edges,
suggesting
disturbed
roadsides
serve
as
vector
invasions
mountains.
From
upcoming
analyses
series,
even
exciting
results
expected,
especially
about
range
shifts.
Implementing
would
help
generate
complete
picture
how
alters
distributions.
This
inform
conservation
policy
ecosystems,
where
policies
remain
poorly
implemented.
Philosophical Transactions of the Royal Society B Biological Sciences,
Journal Year:
2023,
Volume and Issue:
378(1881)
Published: May 29, 2023
As
interest
in
natural
capital
grows
and
society
increasingly
recognizes
the
value
of
biodiversity,
we
must
discuss
how
ecosystem
observations
to
detect
changes
biodiversity
can
be
sustained
through
collaboration
across
regions
sectors.
However,
there
are
many
barriers
establishing
sustaining
large-scale,
fine-resolution
observations.
First,
comprehensive
monitoring
data
on
both
possible
anthropogenic
factors
lacking.
Second,
some
situ
cannot
systematically
established
maintained
locations.
Third,
equitable
solutions
sectors
countries
needed
build
a
global
network.
Here,
by
examining
individual
cases
emerging
frameworks,
mainly
from
(but
not
limited
to)
Japan,
illustrate
ecological
science
relies
long-term
neglecting
basic
our
home
planet
further
reduces
chances
overcoming
environmental
crisis.
We
also
techniques
opportunities,
such
as
DNA
citizen
well
using
existing
forgotten
sites
monitoring,
that
help
overcome
difficulties
at
large
scale
with
fine
resolution.
Overall,
this
paper
presents
call
action
for
joint
factors,
systematic
establishment
maintenance
observations,
network,
beyond
cultures,
languages,
economic
status.
hope
proposed
framework
examples
Japan
serve
starting
point
discussions
collaborations
among
stakeholders
multiple
society.
It
is
time
take
next
step
detecting
socio-ecological
systems,
if
observation
made
more
feasible,
they
will
play
an
even
important
role
ensuring
sustainability
future
generations.
This
article
part
theme
issue
'Detecting
attributing
causes
change:
needs,
gaps
solutions'.
Insect Conservation and Diversity,
Journal Year:
2024,
Volume and Issue:
17(3), P. 449 - 463
Published: Jan. 9, 2024
Abstract
Tracking
insect
biodiversity
trends
and
predicting
future
trajectories
is
limited
by
a
lack
of
monitoring
data
across
large
spatiotemporal
scales.
DNA
metabarcoding
time‐
cost‐efficient
method
to
obtain
these
data,
but
has
several
potential
limitations
in
comparison
traditional
morphological
approaches.
For
example,
may
miss
low‐abundance
or
smaller
bodied
individuals
presence/absence
information,
which
bias
estimates
community
composition.
However,
few
comparisons
morphology‐based
identification
have
been
made
using
insects,
the
far
most
diverse
animal
taxonomic
group.
Here,
we
compared
terrestrial
communities
identified
via
morphology
versus
four
different
habitats
three
seasons
(late
spring,
mid‐summer
early
autumn)
during
2019.
We
species
richness,
composition
body
size,
with
focus
on
key
groups
bees,
true
bugs,
butterflies
hoverflies.
252
total
species,
54.8%
both
methods,
whereas
21.4%
19.8%
were
solely
detected
morphology,
respectively.
Overall,
size
similar
between
methods.
Metabarcoding
detection
successes
declined
taxa,
particularly
hoverflies
bugs;
however,
richness
tended
be
higher
identification.
Our
results
show
that
can
provide
an
accurate
overview
differences
are
comparable
those
determined
recommend
programmes
consider
incorporating
metabarcoding,
although
research
needed
overcome
some
remaining
limitations.
Molecular Ecology Resources,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 4, 2024
Abstract
Mitigating
ongoing
losses
of
insects
and
their
key
functions
(e.g.
pollination)
requires
tracking
large‐scale
long‐term
community
changes.
However,
doing
so
has
been
hindered
by
the
high
diversity
insect
species
that
prohibitively
investments
time,
funding
taxonomic
expertise
when
addressed
with
conventional
tools.
Here,
we
show
these
concerns
can
be
through
a
comprehensive,
scalable
cost‐efficient
DNA
metabarcoding
workflow.
We
use
1815
samples
from
75
Malaise
traps
across
Germany
2019
2020
to
demonstrate
how
incorporated
into
monitoring
networks
for
less
than
50
€
per
sample,
including
supplies,
labour
maintenance.
validated
detected
using
two
publicly
available
databases
(GBOL
GBIF)
judgement
experts.
With
an
average
1.4
M
sequence
reads
sample
uncovered
10,803
species,
which
83.9%
were
represented
single
Operational
Taxonomic
Unit
(OTU).
estimated
another
21,043
plausible
argue
either
lack
reference
barcode
or
are
undescribed.
The
total
31,846
is
similar
number
known
(~35,500).
Because
capture
only
subset
insects,
our
approach
identified
many
likely
unknown
new
science.
Our
reproducible
workflow
(~80%
OTU‐similarity
among
years)
provides
blueprint
biodiversity
other
components
in
near
real
time.