GPCRchimeraDB: A database of chimeric G-Protein Coupled Receptors (GPCRs) to assist their design DOI Creative Commons
Charlotte Crauwels, Adrián Díaz, Wim Vranken

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: Dec. 17, 2024

Abstract G-Protein Coupled Receptors (GPCRs) are membrane proteins implicated in numerous diseases that have been studied for decades. However, despite their significance, many GPCRs remain poorly characterized and untargeted by drugs. Chimeric emerged as valuable tools elucidating GPCR function facilitating the identification of signaling pathways, resolving structures, discovering novel ligands understood GPCRs. Such chimeric obtained merging a well-characterized less-well-characterized at intracellular loops, leveraging knowledge transfer from GPCR. 170 engineered to date, design process remains largely trial-and-error lacks standardized approach. To address this gap, we introduce GPCRchimeraDB ( https://www.bio2byte.be/gpcrchimeradb/ ), first comprehensive database dedicated It catalogs receptors, identified through extensive literature review, includes 1,758 natural GPCRs, enabling connections between chimeras parent receptors while exploration combinations. Both entries extensively described sequence, structural, biophysical level range visualization tools, with annotations resources like UniProt GPCRdb predictions AlphaFold, ESMFold b2btools. Additionally, offers sequence aligner feature comparator investigate differences well guidelines support chimeras. is therefore resource facilitate optimize new chimeras, so helping gain insights into contributing advances therapeutic development. Graphical

Language: Английский

Cannabinoid receptor 1 ligands: Biased signaling mechanisms driving functionally selective drug discovery DOI
Lei Tian,

Taotao Qiang,

Shanglong Liu

et al.

Pharmacology & Therapeutics, Journal Year: 2025, Volume and Issue: unknown, P. 108795 - 108795

Published: Jan. 1, 2025

Language: Английский

Citations

1

Role of Ectopic Olfactory Receptors in the Regulation of the Cardiovascular–Kidney–Metabolic Axis DOI Creative Commons

Mitchell R. Beito,

Sadia Ashraf,

Dorcas Odogwu

et al.

Life, Journal Year: 2024, Volume and Issue: 14(5), P. 548 - 548

Published: April 25, 2024

Olfactory receptors (ORs) represent one of the largest yet least investigated families G protein-coupled in mammals. While initially believed to be functionally restricted detection and integration odors at olfactory epithelium, accumulating evidence points a critical role for ectopically expressed ORs regulation cellular homeostasis extranasal tissues. This review aims summarize current state knowledge on expression physiological functions ectopic cardiovascular system, kidneys, primary metabolic organs emphasizes how altered OR signaling those tissues may impact cardiovascular-kidney-metabolic health.

Language: Английский

Citations

5

Advanced applications of Nanodiscs-based platforms for antibodies discovery DOI

Kristina O Baskakova,

Pavel Kuzmichev, Mikhail S. Karbyshev

et al.

Biophysical Chemistry, Journal Year: 2024, Volume and Issue: 313, P. 107290 - 107290

Published: Oct. 1, 2024

Language: Английский

Citations

4

New drug discovery and development from natural products: Advances and strategies DOI
Yixin Wang,

Fan Wang,

Wenxiu Liu

et al.

Pharmacology & Therapeutics, Journal Year: 2024, Volume and Issue: 264, P. 108752 - 108752

Published: Nov. 16, 2024

Language: Английский

Citations

4

G-protein coupled receptors in metabolic reprogramming and cancer DOI
Songyeon Ahn, Benny Abraham Kaipparettu

Pharmacology & Therapeutics, Journal Year: 2025, Volume and Issue: unknown, P. 108849 - 108849

Published: April 1, 2025

Language: Английский

Citations

0

Unlocking GPCR–ligand interactions: Measuring binding affinities with thermal shift assay DOI
Dmitrii Dashevskii, Aleksandra Luginina, Ivan Maslov

et al.

Protein Science, Journal Year: 2025, Volume and Issue: 34(5)

Published: April 18, 2025

Abstract G protein‐coupled receptors (GPCRs) constitute the largest transmembrane protein superfamily, with over 800 representatives in human genome. Recognized as pivotal targets pharmacological research and drug discovery, these play a crucial role advancing therapeutics. Understanding molecular mechanisms of receptor–ligand interactions is imperative for discovery applications. However, experimental procedures measuring ligand binding are complicated by various factors, including nature high cost associated specialized instruments consumables. Here we introduce an application thermal shift assay (TSA) to affinities GPCRs. TSA cost‐effective user‐friendly method that detects changes stability induced alterations environmental conditions. Employing A 2A adenosine receptor representative GPCR, determined constants four orthosteric ligands allosteric sodium using three mathematical models data approximation analysis. Models were additionally validated two antagonists cysteinyl leukotriene GPCR (CysLT 1 R), used antiasthmatic drugs. Our results suggest approach demonstrates degree reproducibility agreement existing literature data, thereby affirming its suitability investigating types ligands.

Language: Английский

Citations

0

GPCRchimeraDB: A database of chimeric G protein-coupled receptors (GPCRs) to assist their design DOI
Charlotte Crauwels, Adrián Díaz, Wim Vranken

et al.

Journal of Molecular Biology, Journal Year: 2025, Volume and Issue: unknown, P. 169164 - 169164

Published: April 1, 2025

Language: Английский

Citations

0

Physiological bias governs neutrophil inflammatory threat perception DOI Open Access
Denise Pajonczyk,

Lina Pauli,

Charlotte Pünt

et al.

bioRxiv (Cold Spring Harbor Laboratory), Journal Year: 2024, Volume and Issue: unknown

Published: April 9, 2024

Abstract Background and Purpose The functional G protein-coupled receptor (GPCR) signalling unit consists of an agonist acting on a that is coupled to protein transduces the signals effectors within complex cellular environment. While much attention given GPCR-agonist or GPCR-transducer relationships, contribution environment remains significantly unexplored. Experimental Approach Here, we juxtaposed responses triggered by activation two GPCR pattern recognition receptors, Formyl peptide 1 2, in recombinant cell system against their dynamics native neutrophilic Key results We observed leads context-dependent substantial differences texture. impact de novo cAMP formation varied depending type, MAPK was similar both systems. This physiological bias conserved across species. Expression analysis unveiled absence Gαi-sensitive adenylyl cyclases ADCY5 ADCY6 neutrophils, implying synthesis cannot be inhibited Gαi-coupled receptors. behaviour LTB4 high-affinity BLT1 neutrophils corroborated our findings. Conclusion Implications Our data underscore profound specific signalling, causing thereby affecting drug efficacy therapeutic targeting.

Language: Английский

Citations

1

Perspective on G protein-coupled receptors in renal physiology DOI
Jennifer L. Pluznick, Robert A. Fenton

AJP Renal Physiology, Journal Year: 2023, Volume and Issue: 325(6), P. F683 - F684

Published: Oct. 12, 2023

Language: Английский

Citations

1

Preparation scheme and research progress of GPCR antibody drugs DOI Creative Commons

Yi‐Kai Chen

Theoretical and Natural Science, Journal Year: 2023, Volume and Issue: 27(1), P. 251 - 256

Published: Dec. 19, 2023

As a class of proteins that play crucial roles in physiological and pathological processes within the human body, G protein-coupled receptors (GPCRs) have emerged as prominent targets for drug development. However, there is still ample room improvement replacement currently developed drugs due to their inherent toxicity associated side effects. In recent years, attention has shifted towards antibody-based therapeutics targeting GPCRs, owing exceptional specificity low plasma clearance rate. This review provides an overview fundamental preparation process existing challenges encountered developing GPCR antibody drugs, along with introduction several strategies employed formulation.

Language: Английский

Citations

1