Research Square (Research Square),
Journal Year:
2023,
Volume and Issue:
unknown
Published: Oct. 24, 2023
Abstract
Extracellular
vesicles
(EVs)
are
tiny
messengers
that
convey
bioactive
molecules
from
donor
to
recipient
cells,
leading
changes
in
their
physiology
and
function.
We
investigated
the
role
of
EVs
shaping
growth
biofilm
biology
tree
pathogen
Fusarium
circinatum
its
interaction
with
susceptible
host,
Pinus
patula
.
Vesicles
were
collected
fungal
planktonic
cultures
pine
seedling
needles
roots.
The
physical
properties
these
analysed
using
nanoparticle
tracking
analysis
transmission
electron
microscopy,
which
revealed
a
diverse
range
sizes
shapes,
respectively.
Furthermore,
uptake
by
conidia
demonstrated
F.
significantly
but
variably
affected
spore
viability
during
early
phase
(2-4
h)
although
they
enhanced
biomass
extracellular
matrix
(ECM)
production
biofilms.
In
contrast,
P.
greatly
inhibited
hyphal
formation
biomass,
failed
inhibit
ECM
biosynthesis
biofilm.
Our
results
therefore
suggest
conidial
germination
is
essential
for
late
development
including
while
may
be
counter
measure
against
harsh
environmental
conditions
effects
plant-derived
EVs.
Therefore,
plant-microbe
interactions
viewed
within
context
can
improve
understanding
into
dynamic
complex
behaviours
pathogens
plant
hosts.
Cell,
Journal Year:
2024,
Volume and Issue:
187(9), P. 2095 - 2116
Published: April 1, 2024
Plant
diseases
cause
famines,
drive
human
migration,
and
present
challenges
to
agricultural
sustainability
as
pathogen
ranges
shift
under
climate
change.
breeders
discovered
Mendelian
genetic
loci
conferring
disease
resistance
specific
isolates
over
100
years
ago.
Subsequent
breeding
for
underpins
modern
agriculture
and,
along
with
the
emergence
focus
on
model
plants
genetics
genomics
research,
has
provided
rich
resources
molecular
biological
exploration
last
50
years.
These
studies
led
identification
of
extracellular
intracellular
receptors
that
convert
recognition
microbe-encoded
patterns
or
pathogen-delivered
virulence
effectors
into
defense
activation.
receptor
systems,
downstream
responses,
define
plant
immune
systems
have
evolved
since
migration
land
∼500
million
Our
current
understanding
provides
platform
development
rational
enhancement
control
many
continue
plague
crop
production.
Frontiers in Plant Science,
Journal Year:
2025,
Volume and Issue:
15
Published: Jan. 29, 2025
The
avocado
industry
faces
a
significant
threat
from
the
hemibiotrophic
oomycete
pathogen
Phytophthora
cinnamomi
.
A
variably
expressed
defence
gene
during
an
infection
trial
was
Wall-associated
kinase
(
WAK
).
and
WAK-Like
(WAKL)
proteins
are
known
to
bind
fragmented
pectin
(oligogalacturonides)
produced
penetration,
thereby
activating
downstream
defence-related
pathways.
To
better
understand
P.
-avocado
interaction,
this
family
assessed
using
in
silico
methods.
In
study,
previously
generated
RNA-sequencing
data
were
used
associate
genes
with
response,
followed
by
promoter-
phylogenetic
analysis
of
these
genes/proteins.
predicted
modelled
AlphaFold2,
structural
similarity
across
different
rootstocks,
as
well
their
binding
affinity
for
oligogalacturonides,
assessed.
identified
14
Persea
americana
Pa)WAK
s
62
PaWAKL
West-Indian
(pure
accession
reference),
Dusa
®
,
Leola™
R0.12
rootstock
genomes.
These
showed
distribution
genome’s
chromosomes,
MCScanX
analyses
predicting
tandem
duplications.
PaWAK/WAKL
expression
profiles
compared,
implicating
five
defence.
Phylogenetic
promoter
conducted
predict
associated
pathways,
focusing
on
stress
phytohormone-responsive
Structural
differences
varying
oligogalacturonide
affinities
PaWAK/WAKLs
rootstocks.
could
be
incorporated
into
molecular
screening
tool
improve
development
resistant
Microbial Pathogenesis,
Journal Year:
2025,
Volume and Issue:
unknown, P. 107368 - 107368
Published: Feb. 1, 2025
Extracellular
vesicles
(EVs)
are
tiny
messengers
that
convey
bioactive
molecules
from
donor
to
recipient
cells,
leading
changes
in
their
physiology
and
function.
We
investigated
the
role
of
EVs
shaping
growth
biofilm
biology
tree
pathogen
Fusarium
circinatum
its
interaction
with
susceptible
host,
Pinus
patula.
Vesicles
were
collected
fungal
planktonic
cultures
pine
seedling
needles
roots.
The
physical
properties
these
analysed
using
nanoparticle
tracking
analysis
transmission
electron
microscopy,
which
revealed
a
diverse
range
sizes
shapes,
respectively.
Furthermore,
uptake
by
conidia
was
conducted.
results
demonstrated
F.
significantly
but
variably
affected
spore
viability
during
early
phase
(2-4
h)
although
they
enhanced
integrity.
In
contrast,
P.
patula
greatly
inhibited
hyphal
formation
biomass,
failed
inhibit
matrix
production
biofilm.
Our
therefore
show
conidial
germination
is
essential
for
late
development
including
while
counter
measure
against
harsh
environmental
conditions
effects
plant-derived
EVs.
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: April 19, 2024
Abstract
Arg-any
amino
acid-Leu-Arg
(RXLR)
effectors
are
central
oomycete
virulence
factors
that
target
diverse
host
proteins
and
processes
to
suppress
plant
immunity.
Relatively
little
is
known
about
how
they
processed
post-translationally
before
delivery
into
cells.
Proteolytic
cleavage
at
the
RXLR
motif
was
observed
occur
prior
secretion
in
all
Phytophthora
infestans
tested,
suggesting
it
a
general
rule,
between
leucine
second
arginine.
There
no
of
naturally
occurring
structured
region
Pi21388/AvrBlb1,
or
one
introduced
similar
position
effector
Pi04314,
keeping
with
being
positionally
constrained,
potentially
disordered
regions
closely
following
signal
peptide.
Remarkably,
independent
proteolytic
Glu-Glu-Arg
(EER)
motif,
often
found
immediately
downstream
RXLR,
also
effectors,
after
Expression
full-length
Nicotiana
benthamiana
revealed
that,
although
secreted,
were
poorly
processed,
EER
does
not
eukaryotic
Our
observations
indicate
whether
possessing
both
EER,
either
alone,
these
likely
proteolytically
cases.
New Phytologist,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Sept. 27, 2024
Summary
Arg‐any
amino
acid‐Leu‐Arg
(RXLR)
effectors
are
central
oomycete
virulence
factors
that
suppress
plant
immunity.
Relatively
little
is
known
about
how
they
processed
post‐translationally
before
delivery
into
host
cells.
A
range
of
molecular,
cell
and
biochemical
processes
were
used
to
investigate
proteolytic
processing
RXLR
Glu‐Glu‐Arg
(EER)
motifs
in
Phytophthora
infestans
effectors.
Proteolytic
cleavage
at
the
motif
occurred
secretion
all
tested,
suggesting
it
a
general
rule.
Cleavage
between
leucine
second
arginine.
There
was
no
naturally
occurring
structured
region
Pi21388/AvrBlb1,
or
one
introduced
similar
position
effector
Pi04314,
keeping
with
being
positionally
constrained,
potentially
disordered
regions
closely
following
signal
peptide.
Remarkably,
independent
EER
motif,
often
found
immediately
after
RXLR,
also
observed,
Full‐length
expressed
Nicotiana
benthamiana
revealed
that,
although
secreted,
poorly
processed,
does
not
occur
eukaryotic
We
conclude
whether
possessing
both
EER,
either
alone,
these
likely
generally
proteolytically
secretion.
Fungal
pathogens
deliver
effector
proteins
into
living
plant
cells
to
suppress
immunity
and
control
processes
that
are
needed
for
infection.
During
infection,
the
devastating
rice
blast
fungus,
bioRxiv (Cold Spring Harbor Laboratory),
Journal Year:
2024,
Volume and Issue:
unknown
Published: Oct. 13, 2024
Abstract
Structural
biology
is
an
essential
tool
for
understanding
the
molecular
basis
of
biological
processes.
Although
predicting
protein
structures
by
fold
recognition
algorithms
has
become
increasingly
powerful,
especially
with
integration
deep-learning
approaches,
experimentally
resolved
are
indispensable
guiding
structure-function
studies
and
improving
modelling.
However,
experimental
structural
complexes
still
challenging,
owing
to,
example,
necessity
high
concentrations
purity
downstream
analyses
such
as
cryogenic
electron
microscopy
(cryo-EM).
The
use
Nicotiana
benthamiana
leaves
a
transient
expression
system
recombinant
proteins
attractive
approach
plant
inexpensive
to
cultivate,
grows
rapidly,
allows
fast
turnaround
easily
scalable
compared
other
established
systems
insect
cell
cultures.
Using
N.
system,
we
present
here
robust
versatile
protocol
purification
five
heterocomplexes
sizes
ranging
from
∼140
kDa
∼660
consisting
immunoreceptors
their
associated
pathogen
effectors,
followed
microscopy.
plant-based
was
applied
verify
structure
cell-derived
wheat
Sr35
resistosome
co-purify
co-resolve
homodimer
AvrSr35
effector
fungus
Puccinia
graminis
f
sp
tritici
(
Pgt
).
In
several
cases,
only
single
epitope
tag
needed
complex
purification,
reducing
complications
that
come
multiple
tags
two-step
affinity
purifications.
We
identify
codon
usage,
signal
peptide
fusion,
choice
detergents
critical
factors
leaves.