Rapid and accurate identification of pathogenic bacteria at the single‐cell level using laser tweezers Raman spectroscopy and deep learning DOI
Bo Zhou, Li‐Ying Sun, Teng Fang

et al.

Journal of Biophotonics, Journal Year: 2022, Volume and Issue: 15(7)

Published: Feb. 12, 2022

We report a new method for the rapid identification of pathogenic bacterial species at single-cell level that combines laser tweezers Raman spectroscopy (LTRS) with deep learning (DL). LTRS can accurately measure spectra (scRS) without destroying and labeling cells. Based on scRS data, DL rapidly identifies bacteria. measured 15 bacteria using homemade LTRS. For each species, approximately, 160 cells from three different patients were measured, one patient's data used as test set, rest after being augmented was training set. A residual network (ResNet) model, trained achieved an accuracy 94.53% Moreover, we applied gradient-weighted class activation mapping to visualize proposed model. Finally, demonstrated advantages ResNet over traditional machine-learning algorithms.

Language: Английский

Rapid, label-free histopathological diagnosis of liver cancer based on Raman spectroscopy and deep learning DOI Creative Commons
Liping Huang, Hongwei Sun,

Liangbin Sun

et al.

Nature Communications, Journal Year: 2023, Volume and Issue: 14(1)

Published: Jan. 4, 2023

Abstract Biopsy is the recommended standard for pathological diagnosis of liver carcinoma. However, this method usually requires sectioning and staining, well-trained pathologists to interpret tissue images. Here, we utilize Raman spectroscopy study human hepatic samples, developing validating a workflow in vitro intraoperative cancer. We distinguish carcinoma tissues from adjacent non-tumour rapid, non-disruptive, label-free manner by using combined with deep learning, which validated metabolomics. This technique allows detailed identification cancer tissues, including subtype, differentiation grade, tumour stage. 2D/3D images unprocessed slices submicrometric resolution are also acquired based on visualization molecular composition, could assist boundary recognition clinicopathologic diagnosis. Lastly, potential portable handheld system illustrated during surgery real-time

Language: Английский

Citations

140

Machine Learning-Based Label-Free SERS Profiling of Exosomes for Accurate Fuzzy Diagnosis of Cancer and Dynamic Monitoring of Drug Therapeutic Processes DOI

Xingkang Diao,

Xinli Li,

Shuping Hou

et al.

Analytical Chemistry, Journal Year: 2023, Volume and Issue: 95(19), P. 7552 - 7559

Published: May 4, 2023

Exosomes are a class of extracellular vesicles secreted by cells, which can be used as promising noninvasive biomarkers for the early diagnosis and treatment diseases, especially cancer. However, due to heterogeneity exosomes, it remains grand challenge distinguish accurately reliably exosomes from clinical samples. Herein, we achieve accurate fuzzy discrimination human serum samples breast cancer cervical through machine learning-based label-free surface-enhanced Raman spectroscopy (SERS), using "hot spot" rich 3D plasmonic AuNPs nanomembranes substrates. Due existence some weak distinguishable SERS fingerprint signals high sensitivity method, analysis precisely identify three (normal cancerous) cell lines, two different types without specific labeling biomarkers. The prediction accuracy based on learning algorithm was up 91.1% lines (H8, HeLa, MCF-7 cell)-derived exosomes. Our model trained with spectra cell-derived could reach 93.3% Furthermore, action mechanism chemotherapeutic process cells revealed dynamic monitoring profiling secreted. method would useful postoperative assessment or other diseases in future.

Language: Английский

Citations

72

Recent application of Raman spectroscopy in tumor diagnosis: from conventional methods to artificial intelligence fusion DOI Creative Commons

Yafeng Qi,

Yuhong Liu, Jianbin Luo

et al.

PhotoniX, Journal Year: 2023, Volume and Issue: 4(1)

Published: July 7, 2023

Abstract Raman spectroscopy, as a label-free optical technology, has widely applied in tumor diagnosis. Relying on the different technologies, conventional diagnostic methods can be used for diagnosis of benign, malignant and subtypes tumors. In past 3 years, addition to traditional methods, application artificial intelligence (AI) various technologies based been developing at an incredible speed. Based this, three technical from single spot acquisition (conventional surface-enhanced spectroscopy) imaging are respectively introduced analyzed process these methods. Meanwhile, emerging AI applications within highlighted presented. Finally, challenges limitations existing prospects AI-enabled

Language: Английский

Citations

64

Deep learning in spectral analysis: Modeling and imaging DOI
Xuyang Liu, Hongle An, Wensheng Cai

et al.

TrAC Trends in Analytical Chemistry, Journal Year: 2024, Volume and Issue: 172, P. 117612 - 117612

Published: Feb. 20, 2024

Language: Английский

Citations

43

Bridging Nanomanufacturing and Artificial Intelligence—A Comprehensive Review DOI Open Access
Mutha Nandipati, Olukayode Fatoki, Salil Desai

et al.

Materials, Journal Year: 2024, Volume and Issue: 17(7), P. 1621 - 1621

Published: April 2, 2024

Nanomanufacturing and digital manufacturing (DM) are defining the forefront of fourth industrial revolution—Industry 4.0—as enabling technologies for processing materials spanning several length scales. This review delineates evolution nanomaterials nanomanufacturing in age applications medicine, robotics, sensory technology, semiconductors, consumer electronics. The incorporation artificial intelligence (AI) tools to explore nanomaterial synthesis, optimize processes, aid high-fidelity nanoscale characterization is discussed. paper elaborates on different machine-learning deep-learning algorithms analyzing images, designing nanomaterials, nano quality assurance. challenges associated with application machine- models achieve robust accurate predictions outlined. prospects incorporating sophisticated AI such as reinforced learning, explainable (XAI), big data analytics material process innovation, nanosystem integration

Language: Английский

Citations

24

Rapid and quantitative detection of respiratory viruses using surface-enhanced Raman spectroscopy and machine learning DOI
Yanjun Yang, Beibei Xu, Jackelyn Murray

et al.

Biosensors and Bioelectronics, Journal Year: 2022, Volume and Issue: 217, P. 114721 - 114721

Published: Sept. 15, 2022

Language: Английский

Citations

67

Machine-Learning-Assisted Microfluidic Nanoplasmonic Digital Immunoassay for Cytokine Storm Profiling in COVID-19 Patients DOI
Zhuangqiang Gao, Yujing Song,

Te Yi Hsiao

et al.

ACS Nano, Journal Year: 2021, Volume and Issue: 15(11), P. 18023 - 18036

Published: Oct. 29, 2021

Cytokine storm, known as an exaggerated hyperactive immune response characterized by elevated release of cytokines, has been described a feature associated with life-threatening complications in COVID-19 patients. A critical evaluation cytokine storm and its mechanistic linkage to requires innovative immunoassay technology capable rapid, sensitive, selective detection multiple cytokines across wide dynamic range at high-throughput. In this study, we report machine-learning-assisted microfluidic nanoplasmonic digital meet the rising demand for monitoring Specifically, assay was carried out using facile one-step sandwich format three notable features: (i) microarray patterning technique high-throughput, multiantibody-arrayed biosensing chip fabrication; (ii) ultrasensitive imaging utilizing 100 nm silver nanocubes (AgNCs) signal transduction; (iii) rapid accurate machine-learning-based image processing method analysis. The developed allows simultaneous six single run working ranges 1-10,000 pg mL-1 ultralow limits down 0.46-1.36 minimum 3 μL serum samples. whole can afford 6-plex 8 different samples 6 repeats each sample total 288 sensing spots less than min. enhanced convolutional neural network (CNN) dramatically shortens time ∼6,000 fold much simpler procedure while maintaining high statistical accuracy compared conventional manual counting approach. validated gold-standard enzyme-linked immunosorbent (ELISA) utilized profiling positive Our results demonstrate promising practical tool comprehensive characterization patients that holds great promise intelligent next generation monitoring.

Language: Английский

Citations

61

Could artificial intelligence revolutionize the development of nanovectors for gene therapy and mRNA vaccines? DOI Creative Commons

Akbar Hasanzadeh,

Michael R. Hamblin, Jafar Kiani

et al.

Nano Today, Journal Year: 2022, Volume and Issue: 47, P. 101665 - 101665

Published: Nov. 7, 2022

Language: Английский

Citations

40

Digital Histopathology by Infrared Spectroscopic Imaging DOI Creative Commons
Rohit Bhargava

Annual Review of Analytical Chemistry, Journal Year: 2023, Volume and Issue: 16(1), P. 205 - 230

Published: April 17, 2023

Infrared (IR) spectroscopic imaging records spatially resolved molecular vibrational spectra, enabling a comprehensive measurement of the chemical makeup and heterogeneity biological tissues. Combining this novel contrast mechanism in microscopy with use artificial intelligence can transform practice histopathology, which currently relies largely on human examination morphologic patterns within stained tissue. First, review summarizes IR instrumentation especially suited to analyses its performance, major trends. Second, an overview data processing methods application machine learning is given, emphasis emerging deep learning. Third, discussion workflows pathology provided, four categories proposed based complexity analytical performance needed. Last, set guidelines, termed experimental specifications for are help standardize diversity approaches area.

Language: Английский

Citations

35

Artificial intelligence-assisted colorimetry for urine glucose detection towards enhanced sensitivity, accuracy, resolution, and anti-illuminating capability DOI
Fan Feng,

Zeping Ou,

Fangdou Zhang

et al.

Nano Research, Journal Year: 2023, Volume and Issue: 16(10), P. 12084 - 12091

Published: Jan. 19, 2023

Language: Английский

Citations

28