Macromolecules,
Journal Year:
2024,
Volume and Issue:
57(22), P. 10704 - 10716
Published: Nov. 5, 2024
We
propose
an
efficient
method
for
the
self-assembly
of
Gaussian
block
copolymers
with
general
cyclic
architectures
and
nonconcatenated
ring
copolymer
in
a
melt
based
on
Ginzburg–Landau-type
density
functional
theory
combined
random
phase
approximation.
For
copolymers,
applicability
is
enhanced
by
embedding
graph
Laplacian,
which
allows
evaluating
single-chain
scattering
functions
arbitrary
including
internal
multicycles
without
analytical
difficulty.
By
using
this
methodology,
we
predict
diagrams
bicycle
diblock
at
same
cost
as
linear
copolymer,
discover
various
metastable
morphologies
tadpole
triblock
terpolymer,
have
not
been
observed
star
terpolymers.
also
demonstrate
that
our
framework
predicts
diagram
aid
its
function
obtained
experiments.
Macromolecules,
Journal Year:
2024,
Volume and Issue:
57(5), P. 1893 - 1918
Published: Feb. 28, 2024
Solid-state
nuclear
magnetic
resonance
(ssNMR)
has
been
playing
an
indispensable
role
in
revealing
the
interplay
of
structure
and
molecular
dynamics
polymers
at
different
states.
In
this
Perspective,
we
first
provide
overview
about
fundamental
spin
interactions
ssNMR
then
highlight
some
recent
progress
on
sensitivity-enhanced
spectroscopy
situ
NMR.
Moreover,
applications
field
polymer
crystallization,
dynamics,
chemical
reactions,
supramolecular
polymers,
energy
materials,
so
on.
Finally,
our
personal
perspective
is
given
future
development
crossroad
science.
Macromolecules,
Journal Year:
2024,
Volume and Issue:
57(14), P. 6875 - 6896
Published: July 8, 2024
The
variation
of
polymer
topology
provides
an
alternative
way
to
tune
the
properties
materials
without
varying
chemistry
monomers
composing
and
a
powerful
approach
creating
new
functional
testing
ideas
about
molecular
transport
in
fluids
having
broad
theoretical
significance
science.
Here,
we
focus
on
flexible
ring
melts
by
coarse-grained
dynamics
simulations,
where
rings
have
fixed
knot
complexity
defined
minimal
crossing
number
mc,
explore
how
basic
thermodynamic
segmental
dynamic
are
impacted
mc
mass
M.
We
find
that
increasing
has
similar
influence
density,
thermal
expansion
coefficient,
radius
gyration,
overall
average
shape,
along
with
characteristic
temperatures
glass
formation
fragility,
as
recently
found
upon
star
arms
f
defines
corresponding
measure
topological
complexity.
common
trend
these
distinct
classes
polymers
can
be
understood
from
generalized
entropy
theory,
based
alters
packing
frustration,
quantified
dimensionless
coefficient
isothermal
compressibility.
These
findings
confirm
striking
frustration
is
key
factor
determining
glass-forming
liquids.
Notably,
effect
knotting
was
hardly
considered
previous
simulation
experimental
studies
polymers,
which
akin
ignoring
case
so
suggest
might
source
some
variability
measurements
addition
linear
contaminants.
Macromolecular Theory and Simulations,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Feb. 20, 2025
Abstract
The
behavior
of
(athermal)
mobile
doubly
tethered
polymers
(ring‐like
in
3D)
is
investigated,
on
a
2D
substrate
using
the
bond
fluctuation
model.
end‐monomers
can
move
laterally
within
constrained
distance
range.
Conformational
properties
loop
are
analyzed
and
specifically
ordering
system
end‐monomers.
For
this,
director
considered
between
for
local
ordering.
As
tethering
density
increases,
transition
from
mushroom‐like
conformations
to
nearly
upright
structures
observed,
as
case
linear
grafted
polymers.
effects
repulsion
explored,
i.e.,
entropic
repulsion,
order
parameter
orientational
correlations
directors
2D.
Despite
lack
global
phase
transition,
emerges
due
interactions
3D.
PRX Life,
Journal Year:
2025,
Volume and Issue:
3(1)
Published: March 13, 2025
The
transport
of
macromolecules,
such
as
DNA,
through
the
cytoskeleton
is
critical
to
wide-ranging
cellular
processes
from
cytoplasmic
streaming
transcription.
rigidity
and
steric
hindrances
imparted
by
network
filaments
comprising
often
leads
anomalous
subdiffusion,
while
active
motor-driven
restructuring
can
induce
athermal
superdiffusion.
Understanding
interplay
between
these
seemingly
antagonistic
contributions
intracellular
dynamics
remains
a
grand
challenge.
Here,
we
use
single-molecule
tracking
show
that
large
linear
relaxed
circular
DNA
microtubule
networks
be
non-Gaussian
multimodal,
with
degree
spatiotemporal
scales
over
which
features
manifest
depending
nontrivially
on
state
activity
topology.
For
example,
increases
caging
modes
dampening
mechanisms
for
DNA.
We
further
discover
molecules
exhibit
either
markedly
enhanced
subdiffusion
or
superdiffusion
compared
their
counterparts,
in
absence
presence
kinesin
activity,
indicative
microtubules
threading
This
strong
coupling
both
stalling
directed
transport,
providing
direct
route
towards
parsing
distinct
determining
impact
signatures.
More
generally,
leveraging
macromolecular
topology
programming
molecular
interactions
an
elegant
yet
largely
overlooked
mechanism
cells
may
exploit
trafficking,
streaming,
compartmentalization.
could
harnessed
design
self-regulating,
sensing,
reconfigurable
biomimetic
matter.
Published
American
Physical
Society
2025
PRX Life,
Journal Year:
2025,
Volume and Issue:
3(1)
Published: March 7, 2025
Many
bacterial
chromosomes
show
large-scale
linear
order,
so
that
a
locus's
genomic
position
correlates
with
its
along
the
cell.
In
model
organism
,
for
instance,
left
and
right
arms
of
circular
chromosome
lie
in
different
cell
halves.
However,
no
mechanisms
anchor
loci
to
poles
have
been
identified,
it
remains
unknown
how
this
so-called
“left--right”
organization
arises.
Here
we
construct
biophysical
explains
global
order
could
be
established
via
an
active
loop
extrusion
mechanism.
Our
assumes
motor
protein
complex
MukBEF
extrudes
loops
on
most
but
is
excluded
from
terminal
region
by
MatP,
giving
rise
partially
looped
ring
polymer
structure.
Using
three-dimensional
simulations
chromosome,
find
our
can
display
stable
left--right
chromosomal
parameter
regime
consistent
prior
experiments.
We
explain
behavior
considering
effect
bending
rigidity
derive
necessary
conditions
emerge.
Finally,
develop
phase
diagram
system,
where
emerges
when
size
large
enough
compacted
enough.
work
provides
theoretical
mechanistic
explanation
loop-extruders
establish
leads
accurate
gene
positioning
within
cell,
without
locus
anchoring.
Published
American
Physical
Society
2025