BTG13-related metalloenzymes: atypical non-heme iron-dependent dioxygenases with unusual coordination patterns and catalytic mechanisms
Engineering Microbiology,
Journal Year:
2025,
Volume and Issue:
unknown, P. 100188 - 100188
Published: Jan. 1, 2025
Language: Английский
Computational Modeling of the Enzymatic Achmatowicz Rearrangement by Heme-Dependent Chloroperoxidase: Reaction Mechanism, Enantiopreference, Regioselectivity, and Substrate Specificity
Journal of Chemical Information and Modeling,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 31, 2025
The
chloroperoxidase
from
Caldariomyces
fumago
(CfCPO)
catalyzes
the
oxidative
ring
expansion
of
α-heterofunctionalized
furans
via
Achmatowicz
rearrangement,
providing
an
elegant
tool
to
convert
furan
rings
into
complex-prefunctionalized
scaffolds.
However,
mechanism
this
transformation
remains
unclear.
Herein,
CfCPO-catalyzed
reaction
rac-1-(2-furyl)ethanol
(1a)
is
studied
by
quantum
chemical
calculations
and
molecular
dynamics
simulations.
reveal
that
conversion
follows
general
reaction.
Notably,
binding
1a
enzyme's
active
site
influences
Compound
I
(Cpd
I)
formation,
(R)-1a
enantiomer
results
in
a
lower
barrier
compared
(S)-1a,
explaining
observed
(R)-enantiopreference
toward
racemic
substrate.
Additionally,
due
weaker
steric
hindrance
between
porphyrin
substrate,
nucleophilic
attack
Cpd
on
core
preferred
at
less-substituted
C4=C5
bond,
rationale
for
experimentally
regioselectivity.
Finally,
bottleneck
residues
substrate
delivery
channel
also
surroundings
are
proposed
be
responsible
specificity
CfCPO.
This
study
lays
theoretical
foundation
rational
design
new
CPOs
catalyze
rearrangement
with
broader
spectrum
or
specific
stereopreference.
Language: Английский
A concise enzyme cascade enables the manufacture of natural and halogenated protoberberine alkaloids
Fei Li,
No information about this author
Zhenbo Yuan,
No information about this author
Yue Gao
No information about this author
et al.
Nature Communications,
Journal Year:
2025,
Volume and Issue:
16(1)
Published: Feb. 23, 2025
Language: Английский
Protein-derived cofactors: chemical innovations expanding enzyme catalysis
Chemical Society Reviews,
Journal Year:
2025,
Volume and Issue:
unknown
Published: Jan. 1, 2025
Protein-derived
cofactors,
formed
through
posttranslational
modification
of
a
single
amino
acid
or
covalent
crosslinking
side
chains,
represent
rapidly
expanding
class
catalytic
moieties
that
redefine
enzyme
functionality.
Language: Английский
Substrate specificity of a branch of aromatic dioxygenases determined by three distinct motifs
Chengsen Cui,
No information about this author
Lujia Yang,
No information about this author
Z. E. Liu
No information about this author
et al.
Nature Communications,
Journal Year:
2024,
Volume and Issue:
15(1)
Published: Sept. 3, 2024
Language: Английский
Regioselectivity Switches between Anthraquinone Precursor Fissions Involved in Bioactive Xanthone Biosynthesis
Xiaojing Lv,
No information about this author
Chun-Zhi Ai,
No information about this author
Li Rong Zhang
No information about this author
et al.
Chemical Science,
Journal Year:
2024,
Volume and Issue:
unknown
Published: Jan. 1, 2024
Xanthone-based
polyketides
with
complex
molecular
frameworks
and
potent
bioactivities
distribute
function
in
different
biological
kingdoms,
yet
their
biosynthesis
remains
under-investigated.
In
particular,
nothing
is
known
regarding
how
to
switch
between
the
C
Language: Английский