Bio-organic fertilizers stimulate indigenous soil Pseudomonas populations to enhance plant disease suppression DOI Creative Commons
Chengyuan Tao, Rong Li, Wu Xiong

et al.

Microbiome, Journal Year: 2020, Volume and Issue: 8(1)

Published: Sept. 22, 2020

Abstract Background Plant diseases caused by fungal pathogen result in a substantial economic impact on the global food and fruit industry. Application of organic fertilizers supplemented with biocontrol microorganisms ( i.e. bioorganic fertilizers) has been shown to improve resistance against plant pathogens at least part due impacts structure function resident soil microbiome. However, it remains unclear whether such improvements are driven specific action microbial inoculants, populations naturally fertilizer or physical-chemical properties compost substrate. The aim this study was seek ecological mechanisms involved disease suppressive activity bio-organic fertilizers. Results To disentangle mechanism action, we conducted an experiment tracking Fusarium wilt banana changes communities over three growth seasons response following four treatments: (containing Bacillus amyloliquefaciens W19), fertilizer, sterilized B . W19. We found that which re-inoculated provided similar degree suppression as non-sterilized across cropping seasons. further observed these treatments is linked communities, specifically leading increases Pseudomonas spp.. Observed correlations between amendment indigenous spp. might underlie were studied laboratory pot experiments. These studies revealed bacterial taxa synergistically increase biofilm formation likely acted plant-beneficial consortium pathogen. Conclusion Together demonstrate product inoculum within its This knowledge should help design more efficient biofertilizers designed promote function.

Language: Английский

Beneficial Services of Arbuscular Mycorrhizal Fungi – From Ecology to Application DOI Creative Commons
Min Chen,

Miguel Arato,

Lorenzo Borghi

et al.

Frontiers in Plant Science, Journal Year: 2018, Volume and Issue: 9

Published: Sept. 4, 2018

Arbuscular mycorrhiza (AM) is the most common symbiotic association of plants with microbes. AM fungi occur in majority natural habitats and they provide a range important ecological services, particular by improving plant nutrition, stress resistance tolerance, soil structure fertility. also interact crop including cereals, vegetables, fruit trees, therefore, receive increasing attention for their potential use sustainable agriculture. Basic research past decade has revealed existence dedicated recognition signaling pathway that required AM. Furthermore, recent evidence provided new insight into exchange nutritional benefits between partners. The great application given rise to thriving industry AM-related products agriculture, horticulture, landscaping. Here, we discuss developments these fields, highlight future limits toward production.

Language: Английский

Citations

437
Networking in the Plant Microbiome DOI Creative Commons
Marcel G. A. van der Heijden, Martin Hartmann

PLoS Biology, Journal Year: 2016, Volume and Issue: 14(2), P. e1002378 - e1002378

Published: Feb. 12, 2016

Almost all higher organisms, including plants, insects, and mammals, are colonized by complex microbial communities harbor a microbiome. Emerging studies with plants reveal that these microbiomes structured form complex, interconnected networks. Within networks, different taxa have roles, keystone species been identified could be crucial for plant health ecosystem functioning. A new paper in this issue of PLOS Biology Agler et al. highlights the presence hubs networks may act as mediators between its next major frontier is now to link microbiome composition function. In order do this, we present number hypothetical examples how diversity function potentially influence host performance.

Language: Английский

Citations

423
Rare microbial taxa as the major drivers of ecosystem multifunctionality in long-term fertilized soils DOI Creative Commons
Qing‐Lin Chen, Jing Ding, Dong Zhu

et al.

Soil Biology and Biochemistry, Journal Year: 2019, Volume and Issue: 141, P. 107686 - 107686

Published: Nov. 22, 2019

Language: Английский

Citations

423
Organic farming enhances soil microbial abundance and activity—A meta-analysis and meta-regression DOI Creative Commons
Martina Lori,

Sarah Symnaczik,

Paul Mäder

et al.

PLoS ONE, Journal Year: 2017, Volume and Issue: 12(7), P. e0180442 - e0180442

Published: July 12, 2017

Population growth and climate change challenge our food farming systems provide arguments for an increased intensification of agriculture. A promising option is eco-functional through organic farming, approach based on using enhancing internal natural resources processes to secure improve agricultural productivity, while minimizing negative environmental impacts. In this concept active soil microbiota plays important role various ecosystem services such as nutrient cycling, erosion control pest disease regulation. Several studies have reported a positive effect health quality including microbial community traits. However, so far no systematic quantification whether comprise larger more communities compared conventional was performed global scale. Therefore, we conducted meta-analysis current literature quantify possible differences in key indicators abundance activity cropping systems. All together integrated data from 56 mainly peer-reviewed papers into analysis, 149 pairwise comparisons originating different climatic zones experimental duration ranging 3 than 100 years. Overall, found that had 32% 84% greater biomass carbon, nitrogen, total phospholipid fatty-acids, dehydrogenase, urease protease activities Exclusively the metabolic quotient indicator stresses remained unaffected by Categorical subgroup analysis revealed crop rotation, inclusion legumes rotation inputs are practices affecting size activity. Furthermore, show between vary function land use (arable, orchards, grassland), plant life cycle (annual perennial) zone. summary, study shows overall enhances soils

Language: Английский

Citations

422
Long-term manure application increases soil organic matter and aggregation, and alters microbial community structure and keystone taxa DOI
Yongxin Lin,

Guiping Ye,

Yakov Kuzyakov

et al.

Soil Biology and Biochemistry, Journal Year: 2019, Volume and Issue: 134, P. 187 - 196

Published: April 3, 2019

Language: Английский

Citations

419
Microbial and biochemical basis of a Fusarium wilt-suppressive soil DOI Open Access

Jae-Yul Cha,

Sangjo Han,

Hee-Jeon Hong

et al.

The ISME Journal, Journal Year: 2015, Volume and Issue: 10(1), P. 119 - 129

Published: June 9, 2015

Language: Английский

Citations

412
Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests DOI Creative Commons

Kristin Kaiser,

Bernd Wemheuer,

Vera Korolkow

et al.

Scientific Reports, Journal Year: 2016, Volume and Issue: 6(1)

Published: Sept. 21, 2016

Abstract Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses bacterial communities to different land use management regimes are not fully understood. Here, we assessed 150 forest grassland soils derived from three German regions by pyrotag sequencing 16S rRNA genes. Land type (forest grassland) edaphic properties strongly affected community structure function, whereas regime had minor effect. In addition, separation sampling region was encountered. pH the best predictor for structure, diversity function. The application multinomial log-linear models revealed distinct abundant groups towards pH. Predicted profiles that differences only select populations but also specific traits. combination data corresponding provided comprehensive insights into adaptations changing environmental conditions associated with management.

Language: Английский

Citations

355
Insight into how organic amendments can shape the soil microbiome in long-term field experiments as revealed by network analysis DOI
Ning Ling, Chen Zhu,

Chao Xue

et al.

Soil Biology and Biochemistry, Journal Year: 2016, Volume and Issue: 99, P. 137 - 149

Published: May 18, 2016

Language: Английский

Citations

345
More Than the Sum of Its Parts: Microbiome Biodiversity as a Driver of Plant Growth and Soil Health DOI Open Access
Muhammad Saleem, Jie Hu, Alexandre Jousset

et al.

Annual Review of Ecology Evolution and Systematics, Journal Year: 2019, Volume and Issue: 50(1), P. 145 - 168

Published: July 24, 2019

Microorganisms drive several processes needed for robust plant growth and health. Harnessing microbial functions is thus key to productive sustainable food production. Molecular methods have led a greater understanding of the soil microbiome composition. However, translating species or gene composition into functionality remains challenge. Community ecology concepts such as biodiversity–ecosystem functioning framework may help predict assembly function plant-associated microbiomes. Higher diversity can increase number resilience plant-beneficial that be coexpressed unlock expression traits are hard obtain from any in isolation. We combine well-established community with molecular microbiology workable enable us enhance promote global change context.

Language: Английский

Citations

338
How Agricultural Intensification Affects Biodiversity and Ecosystem Services DOI
Mark Emmerson, Manuel B. Morales, Juan J. Oñate

et al.

Advances in ecological research/Advances in Ecological Research, Journal Year: 2016, Volume and Issue: unknown, P. 43 - 97

Published: Jan. 1, 2016

Language: Английский

Citations

336