Recruitment of CRISPR-Cas systems by Tn7-like transposons DOI Open Access
Joseph E. Peters, Kira S. Makarova, Sergey Shmakov

et al.

Proceedings of the National Academy of Sciences, Journal Year: 2017, Volume and Issue: 114(35)

Published: Aug. 15, 2017

Significance CRISPR-Cas is an adaptive immunity system that protects bacteria and archaea from mobile genetic elements. We present comparative genomic phylogenetic analysis of minimal variants associated with distinct families transposable elements develop the hypothesis such repurposed defense systems contribute to element propagation by facilitating transposition into specific sites. Thus, these are predicted propagate via RNA-guided transposition, a mechanism has not been previously described for DNA transposons.

Language: Английский

CRISPR-CasΦ from huge phages is a hypercompact genome editor DOI
Patrick Pausch, Basem Al-Shayeb, Ezra Bisom-Rapp

et al.

Science, Journal Year: 2020, Volume and Issue: 369(6501), P. 333 - 337

Published: July 17, 2020

Compact defense system in bacteriophages The CRISPR-Cas system, naturally found many prokaryotes, is widely used for genome editing. CRISPR arrays the bacterial genome, derived from of invading viruses, are to generate a RNA that guides Cas enzyme destroy repeat viral invaders. Recently, an unexpectedly compact was identified huge bacteriophages. Pausch et al . show even though this lacks commonly accessory proteins, it functional. In addition array, only component called CasF, which uses same active site process transcripts into and foreign nucleic acids. This human plant cells, provides hypercompact genome-editing toolbox. Science issue p. 333

Language: Английский

Citations

445

Clades of huge phages from across Earth’s ecosystems DOI Creative Commons
Basem Al-Shayeb, Rohan Sachdeva, Lin-Xing Chen

et al.

Nature, Journal Year: 2020, Volume and Issue: 578(7795), P. 425 - 431

Published: Feb. 12, 2020

Bacteriophages typically have small genomes

Language: Английский

Citations

443

History of CRISPR-Cas from Encounter with a Mysterious Repeated Sequence to Genome Editing Technology DOI Open Access
Yoshizumi Ishino, Mart Krupovìč, Patrick Forterre

et al.

Journal of Bacteriology, Journal Year: 2018, Volume and Issue: 200(7)

Published: Jan. 18, 2018

ABSTRACT Clustered regularly interspaced short palindromic repeat (CRISPR)-Cas systems are well-known acquired immunity that widespread in archaea and bacteria. The RNA-guided nucleases from CRISPR-Cas currently regarded as the most reliable tools for genome editing engineering. first hint of their existence came 1987, when an unusual repetitive DNA sequence, which subsequently was defined a CRISPR, discovered Escherichia coli during analysis genes involved phosphate metabolism. Similar sequence patterns were then reported range other bacteria well halophilic archaea, suggesting important role such evolutionarily conserved clusters repeated sequences. A critical step toward functional characterization recognition link between CRISPRs associated Cas proteins, initially hypothesized to be repair hyperthermophilic archaea. Comparative genomics, structural biology, advanced biochemistry could work hand hand, not only culminating explosion based on CRISPR-Cas9 class II but also providing insights into origin evolution this system mobile genetic elements denoted casposons. To celebrate 30th anniversary discovery minireview briefly discusses fascinating history systems, original observation enigmatic E. humans.

Language: Английский

Citations

434

Cas13d Is a Compact RNA-Targeting Type VI CRISPR Effector Positively Modulated by a WYL-Domain-Containing Accessory Protein DOI Creative Commons

Winston X. Yan,

Shaorong Chong,

Huaibin Zhang

et al.

Molecular Cell, Journal Year: 2018, Volume and Issue: 70(2), P. 327 - 339.e5

Published: March 18, 2018

Language: Английский

Citations

418

Diversity, ecology and evolution of Archaea DOI
Brett J. Baker, Valerie De Anda,

Kiley W. Seitz

et al.

Nature Microbiology, Journal Year: 2020, Volume and Issue: 5(7), P. 887 - 900

Published: May 4, 2020

Language: Английский

Citations

407

CasX enzymes comprise a distinct family of RNA-guided genome editors DOI Open Access
Junjie Liu, N. S. Orlova,

Benjamin L. Oakes

et al.

Nature, Journal Year: 2019, Volume and Issue: 566(7743), P. 218 - 223

Published: Feb. 1, 2019

Language: Английский

Citations

396

Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations DOI
Cindy J. Castelle, Christopher T. Brown, Karthik Anantharaman

et al.

Nature Reviews Microbiology, Journal Year: 2018, Volume and Issue: 16(10), P. 629 - 645

Published: Sept. 4, 2018

Language: Английский

Citations

376

Microbial diversity in extreme environments DOI

Wensheng Shu,

Li‐Nan Huang

Nature Reviews Microbiology, Journal Year: 2021, Volume and Issue: 20(4), P. 219 - 235

Published: Nov. 9, 2021

Language: Английский

Citations

359

The emerging and uncultivated potential of CRISPR technology in plant science DOI
Yingxiao Zhang, Aimee A. Malzahn, Simon Sretenovic

et al.

Nature Plants, Journal Year: 2019, Volume and Issue: 5(8), P. 778 - 794

Published: July 15, 2019

Language: Английский

Citations

336

Molecular Mechanisms of RNA Targeting by Cas13-containing Type VI CRISPR–Cas Systems DOI
Mitchell R. O’Connell

Journal of Molecular Biology, Journal Year: 2018, Volume and Issue: 431(1), P. 66 - 87

Published: June 22, 2018

Language: Английский

Citations

299